Pseudoclavibacter triregionum: USB125703_01157
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Entry
USB125703_01157 CDS
T07344
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03420
Nucleotide excision repair
psev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
USB125703_01157 (pcrA_1)
03430 Mismatch repair
USB125703_01157 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01157 (pcrA_1)
Enzymes [BR:
psev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
USB125703_01157 (pcrA_1)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
USB125703_01157 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
USB125703_01157 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_30
UvrD_C_2
CATASP
nSTAND3
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CAG7844905
LinkDB
All DBs
Position
1:1301061..1302599
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AA seq
512 aa
AA seq
DB search
MVRLTPEQALAAAAQDRLVNIVSAPGSGKTTVAAERFGYQRHLAGDERGVLGLSFNRAAV
AELRARISARWGGGAISPPHRVMTFDHLHVELLHRLLDAGLVNWPTGLRELDVRDDYRGT
AGFRFLAPPSNFLRVAVLDGQRNVVSRGRRVEQPTTGIGNVAAHDALLSAGIVSHDDVRN
ILLSAMQVDELSEFAATWLAENYRALVIDEVYDAAFLDLKVAHLAAEAGLDVTLIGDPWQ
ALYKWRGATPDEVQRLLGATTERFVEYQQPQSFRFVGDQMPELARALRNGEPVSLPSGTS
EQVDVALARTWRPLWSAGDNILPLSFRTIENATDAALNLLLDVVTRGRLGVSSFGREAAI
ARLGLDRERFLAEQDRVLQPIVAGLRAGRAPADALNELRNAIRDLGVTRPRRLGSAAEAE
RVAQVERLAARLVKDSVVPGMTVFQAKGREWERVGVILTRAQRALLSTGLHELEDEHCVV
YVALTRARRECIQLDGDPALDEGTLDIPADDD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcttacccctgagcaggcgctcgcagcagcagctcaggaccgcctagtcaat
attgtgtccgcgccaggcagcgggaagacgaccgttgccgccgagcggttcggctatcag
cggcatctcgcgggtgacgaacgaggagtgctcggcctgagcttcaaccgggcggctgtt
gctgagctgcgtgcccggatcagtgcgcgatggggcggcggcgcaatctcgcctccccac
agagtgatgaccttcgatcacttgcatgtcgagctgctgcaccgattgctcgacgctgga
ctcgtcaactggccgactggcctgcgcgaactcgacgttcgagacgactaccggggcacc
gccgggtttcgcttcctcgcacctcccagcaacttcctacgagtcgctgtcctcgacgga
cagcgaaacgtagtctcccgcggtcgccgagtagagcagccaacgaccgggatcggaaat
gtcgcagcgcatgacgcgctgctcagtgccggcatcgtcagtcacgacgacgtgcgcaac
attctgctgtctgcgatgcaagtcgatgaactgagcgagttcgcggcgacgtggctggcg
gagaactaccgcgcgctcgtcattgacgaggtgtacgacgctgccttcttggacctcaag
gtcgcccaccttgcggctgaagctggcctggacgtgacattgatcggcgacccttggcag
gcgctctacaagtggcgcggcgcaacaccggatgaggtgcagcgtctcctaggggcgacg
acggagaggttcgtcgagtaccagcagccgcagtccttcagattcgttggcgatcaaatg
cctgagctggcaagggcgctcagaaacggcgagcccgtgagtctgcccagtgggacgagt
gagcaggtcgacgtggcgcttgcgcgcacctggcgaccgctgtggtccgccggagacaac
atccttcccttgtcgttccgcacgatcgagaatgcgactgatgccgcactcaatctgttg
ttggatgtcgtgacgcgtgggcgtctcggagtgtcgtcgttcgggcgagaggcagcgatc
gccaggctcgggcttgatcgtgagcggttcctggccgagcaggatcgagtcctgcaaccg
atagtcgccgggctgcgcgcggggagagcacctgctgacgcgctcaatgaactccgaaat
gcgatcagggatctcggtgtcactcggccgcgtcgccttggttcggccgcagaggctgaa
cgggtcgcacaagtcgagcgtctcgcggcgcgacttgtcaaggattcggttgttcccggc
atgaccgtcttccaggcgaaaggacgtgagtgggagcgtgttggcgtcatcctcaccagg
gcgcagcgcgcgctcttgtccaccgggctgcacgagctcgaggacgagcactgcgtcgtc
tacgtcgcccttacacgagcaaggcgtgaatgcattcaacttgacggagacccagcactg
gatgagggcacgctcgacatacccgcggacgacgattga
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