Pseudoclavibacter triregionum: USB125703_01213
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Entry
USB125703_01213 CDS
T07344
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psev03036
]
USB125703_01213 (smc)
Chromosome and associated proteins [BR:
psev03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
USB125703_01213 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAG7844960
LinkDB
All DBs
Position
1:1370988..1374788
Genome browser
AA seq
1266 aa
AA seq
DB search
MHLKSLTLKGFKSFANPTTLLFEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK
MEDVIFAGTSTRGPLGRAEVALTIDNADGALPIDYAEVTIRRTLFRSGGSEYAINGEPVR
LLDVQELLSDTGLGREMHVIVGQGRLDSVLHATPEERRGFIEEAAGILKHRRRKEKTVRK
LEGMEHNLTRLRDLATEVRRQLKPLGRQAEVARRAQGIAAIVRDAKARLMADDVVELRRA
LQVAGRTEQERSTERMVLQEKLQQAVVRAERIVAEQRGDRVDGARRVAFELESALERLRN
LEQLAGQRRALLEQRLEQPAREVTVAPDAVEQALAEAELLRGRAAEAEAAWRAAQDATAA
ARAALDAVDEEIAAQSALISRHDLEASQLQGAADAAASRLAAVRGEVLRQRNARDAAAQR
LADGETALAELDASSSAGEAESGELDAAYQAAEIAVTDAEVDLEAVRERLHELERERDAL
EAREQALGLAAEVQDGTGALLAAKLDGVDGLVAERIAVDEGYETAIAAALGQLADAILAE
SAEAAIAVLERAREGELGRVEVVAPFSAPEAAARAGSSAKLPPGEVAAASVVRAPTPVEA
LLAGTVVVETLDDARALLAADDAPPRVVTRAGESLTASSAAGGTGTSGQSRIELLAERDR
ASARLAEVRAEIDEASLQRGERRAELEAAKSAQAQALEGLRAFDAELASRREALHRATSR
VESARAELARAAKALELAESGVADAEAKAEAAKRALEVHRSTPRPLLEPGRRDEQLEALE
AAREAEVEARLGLETLRERVRAETLRAEQLAERLEAERAAADRAARETVLRRAELDRTLG
VLGALPQVIRLAAASLDEAKDALRDAERERESQNEELARLRGQESELRGRLAEITDDVHN
LELQIYEKKLQLSSLLERAASELSLTEAILVDEYGPDRLVPDDDETLRSIAERAAAVTAE
SSAIRRALEEAEGDEERDGLEREFERALRERLEEAGEGDDAEAAADADADAERSPDDDGA
EPADPAGVPYERVAQQRRLAEAERMMAQLGRINPLALEEFAALEQRHAFLAEQLDDLERT
RRDLMKIVADIDERMKTVFAEAFEDTREAFHTVFPILFPGGAGDIRLTAPDDLLTTGIEV
SVKPAGKKIERLSLLSGGERSLAAVALLIAIFKARPSPFYIMDEVEAALDDANLGRLLEV
FQDLRASSQLIVITHQKRTMEIADALYGVSMRQDGVSAVVGQRIADEAPGEAPRERPSAV
QDQPRG
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaagagcctcaccctcaaggggttcaagtcgttcgcgaacccgacgaccctc
ctcttcgagcccggcgtgacgtgcgtcgtcggcccgaacggctccggcaagtcgaacgtc
gtcgacgcgctcgcctgggtcatgggcgagcagggcgcgaagtcgctgcgcggcgggaag
atggaggacgtcatcttcgcgggcacctccacccgcggcccgctcggccgcgccgaggtg
gcgctcacgatcgacaacgccgacggcgccctcccgatcgactacgccgaggtgacgatc
cgccgcacgctcttccgctccggcggctccgagtacgcgatcaacggagagcccgtgcgc
ctcctcgacgtgcaggagctcctctcggacaccgggctgggtcgagagatgcacgtcatc
gtcggccaggggcgcctcgactccgtcctccacgcgacccccgaggagcggcgcggcttc
atcgaggaagccgcgggcatcctcaagcaccgccgccgcaaggagaagaccgtccgcaag
ctcgaggggatggagcacaacctcacgcgcctgcgggatctcgcgaccgaggtgcggcgc
cagctgaagccgctcggccgtcaggccgaggtcgcccgccgcgcccagggcatcgccgcg
atcgtccgcgacgcgaaggcgcgtctcatggccgacgacgtcgtcgagctgcggcgcgcc
ctccaggtcgccggacggaccgagcaggagcgctcgaccgagcggatggtgctccaggag
aagctccagcaggcggtcgtccgcgccgagcggatcgtcgccgagcagcgcggcgaccgc
gtcgacggggcccgccgcgtcgccttcgagctcgagtcggcgctcgagcgcctgcggaac
ctcgagcagctcgccggccagcgccgcgccctcctcgagcagcgcctcgagcagcccgcc
cgcgaggtcaccgtcgcgccggatgccgtcgagcaggcgctcgccgaggccgagctgctg
cgcggccgggccgcggaggccgaggccgcatggcgcgccgcgcaggacgccaccgccgcc
gcgcgcgccgccctcgacgccgtcgacgaggagatcgccgcccagtcggcgctcatctcg
cgccacgacctcgaggcctcgcagctgcagggcgccgccgacgcggcggcatcccgcctc
gccgccgtgcgcggcgaggtgctgcgccagaggaacgcgcgggacgccgccgcccagcgc
ctcgccgacggcgagacggcgctcgcggagctcgacgcctcctcgagcgcgggcgaggcc
gagtcgggcgagctcgacgccgcctaccaggccgccgagatcgccgtcaccgacgccgag
gtcgacctcgaggccgtgcgcgagcgcctccacgagctcgagcgtgagcgcgacgccctc
gaggcgcgcgagcaggcgctcggactcgccgccgaggtgcaggacggcacgggcgccctc
ctcgccgcgaagctcgacggggtcgacgggctcgtcgccgagcggatcgccgtcgacgag
ggctacgagacggcgatcgccgccgcgctcggccagctcgccgacgccatcctcgccgag
tccgcggaggccgcgatcgcggtgctcgagcgagcgcgtgaaggggagctcgggcgcgtc
gaggtcgtcgcgccgttctccgcgccggaggccgcggcccgcgccggctcctccgcgaag
ctcccgccgggcgaggtcgccgcggcctccgtcgtccgcgccccgacgcccgtcgaggcg
ctcctcgccggcaccgtcgtcgtcgagaccctcgacgacgcccgcgcgctcctcgccgcc
gacgacgcgccgccgcgcgtcgtgacgcgcgcgggggagtcgctcaccgcctcgagcgca
gccggcggcacggggacctccggccagagccgcatcgagctcctcgccgagcgcgaccgc
gcgagcgcgcgcctcgccgaggtgcgcgccgagatcgacgaggcctcgctccagcgcggc
gagcggcgcgccgagctcgaggccgcgaagtcggcgcaggcgcaggcgctcgaggggctg
cgcgccttcgacgccgagctcgcctcccgccgcgaggccctccaccgcgccacgagccgc
gtcgagtcggcccgcgccgagctcgcccgcgccgcgaaggcgctcgagctcgccgagtcc
ggcgtcgcggacgccgaagccaaggccgaggccgccaagcgcgccctcgaggtgcaccgc
tcgaccccgcgccccctcctcgagcccggccggcgcgacgagcagctcgaggcgctcgag
gccgcccgcgaggccgaggtcgaggcgcgcctcgggctcgagaccctccgcgagcgcgtc
cgcgccgagacgctccgcgccgagcagctcgccgagcggctcgaggccgagcgcgcggcc
gccgaccgggccgcgcgcgagacggtgctgcgccgggccgagctcgatcgcacgctcggg
gtgctcggggcgctgccccaggtcatccgcctcgccgccgcctcgctcgacgaggcgaag
gacgccctccgcgacgccgagcgcgagcgcgagtcgcagaacgaggagctcgcgcgcctg
cgcggccaggagtccgagctgcgcggccgcctcgccgagatcaccgacgacgtccacaac
ctcgagctgcagatctacgagaagaagctccagctctcgagcctgctcgagcgggccgcg
agcgagctctcgctcaccgaggcgatcctcgtcgacgagtacgggccggatcgcctcgtg
ccggacgacgacgagacgctgcgatccatcgccgagcgcgccgccgcggtgaccgccgag
agctcggccatccgccgcgccctcgaggaggccgagggcgacgaggagcgcgacggcctc
gagcgcgagttcgagcgggcgctccgcgagcggctcgaggaggcgggggagggcgacgac
gccgaggccgccgccgatgccgatgccgatgccgagcgctcccccgatgacgacggcgcc
gagccggccgatccggcgggcgtcccctacgagcgcgtcgcccagcagcgccgcctcgcc
gaggccgagcggatgatggcccagctcggccgcatcaaccccctcgccctcgaggagttc
gccgccctcgagcagcgccacgccttcctcgccgagcagctcgacgacctcgagcgcacc
cgccgcgacctcatgaagatcgtcgccgacatcgacgagcgcatgaagacggtcttcgcg
gaggccttcgaggacacccgcgaggccttccacacggtcttcccgatcctcttcccgggc
ggcgcgggcgacatccgcctcaccgcgccggacgacctcctgacgaccggcatcgaggtc
tcggtgaagcccgccggcaagaagatcgagcggctctccctgctctcgggcggcgagcgc
tcgctcgcggcggtggccctcctcatcgcgatcttcaaggcccgcccgagcccgttctac
atcatggacgaggtcgaggcggccctcgacgacgcgaacctcggtcgcctcctcgaggtg
ttccaggacctccgcgcctcgagccagctcatcgtcatcacccaccagaagcgcacgatg
gagatcgcggacgccctctacggggtctcgatgcggcaggacggcgtctccgcggtcgtc
ggccagcgcatcgccgacgaggcccctggggaggccccgagggagcggccgtccgccgtg
caggatcagcccaggggctga
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