Pseudoclavibacter triregionum: USB125703_01219
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Entry
USB125703_01219 CDS
T07344
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev02024
Quorum sensing
psev03060
Protein export
psev03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
USB125703_01219 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
USB125703_01219 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
USB125703_01219 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psev02044
]
USB125703_01219 (ffh)
Enzymes [BR:
psev01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
USB125703_01219 (ffh)
Secretion system [BR:
psev02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
USB125703_01219 (ffh)
Eukaryotic Sec-SRP protein
USB125703_01219 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
Zeta_toxin
AAA_24
AAA_22
MMR_HSR1
nSTAND3
APS_kinase
AAA_31
AAA_18
ArsA_ATPase
NACHT
AAA_33
AAA_16
MeaB
NPHP3_N
NTPase_1
TsaE
AAA
ABC_tran
AAA_14
AAA_17
SLFN-g3_helicase
NB-ARC
AAA_26
AAA_5
Thymidylate_kin
KAP_NTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAG7844966
LinkDB
All DBs
Position
1:1380164..1381738
Genome browser
AA seq
524 aa
AA seq
DB search
MAIFGNLSVRLTETLANLRTKGKLTPADVDGTVREIRRALLEADVALPVVKDFTAHVRER
ALADDVNKALNPAQQVVQIVNDELIRILGGEVRRLEFAKTPPTVIMLAGLQGAGKTTLAG
KLAKKLRDDKHAPLLVAADLQRPNAVTQLQVVGEQAGVHVYAPEPGNGVGDPVKVAKDAV
RYAQDKLYDVVIIDTAGRLGVDAELMKQASNIRKATNPDEVLFVIDAMIGQDAVATAKAF
QDGVGFTGVVLSKLDGDARGGAALSVAHVTGKPIMFASTGERLDEFEVFHPDRMASRILD
MGDILTLIEQAQKAFDEQEAMKVAEKLATDDFTLDDFLQQMQQLRKAGNLKRMLGMLPGM
GQMKEALENFDEREINRTEAIIQSMTPEERRNPKILNGSRRARIARGCGRTVTDVNELVK
RFEQASKMMKQVARGGTPQIPGMPGMPGMGGGRAAQRAAQKGKKKGQARSGNPAKRQQQE
LEAAQRPQPGAALGKGAAFGGPAASIPGQPTEEELAQLQKFLGR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggccatcttcgggaacctgtcggtccgcctcaccgagaccctcgcgaatctccgcacc
aagggcaagctcacgcccgccgacgtcgacggcaccgtccgcgagatccgccgcgccctc
ctcgaggccgacgtcgcgctcccggtcgtcaaggacttcaccgcgcacgtccgcgagcgc
gcgctcgccgacgacgtgaacaaggcgctcaacccggcgcagcaggtcgtccagatcgtc
aacgacgagctcatccgcatcctcggcggcgaggtgcgccgcctcgagttcgcgaagacc
ccgccgacggtcatcatgctcgcgggcctccagggcgccggaaagacgaccctcgcgggc
aagctcgcgaagaagctccgcgacgacaagcacgcgccgctgctcgtcgccgccgacctc
cagcgcccgaacgccgtcacccagctccaggtcgtcggcgagcaggccggcgtccacgtc
tacgcgcccgagcccggcaacggcgtcggcgaccccgtgaaggtcgcgaaggacgccgtc
cgctacgcgcaggacaagctctacgacgtcgtcatcatcgacaccgccggccgcctcggc
gtcgacgccgagctcatgaagcaggcgtcgaacatccgcaaggcgacgaacccggacgag
gtcctcttcgtcatcgacgcgatgatcggccaggacgccgtcgcgacggcgaaggcgttc
caggacggcgtcggcttcacgggcgtcgtgctctcgaagctcgacggcgacgcgcgaggc
ggcgcggccctctcggtcgcgcacgtcacgggcaagccgatcatgttcgcctcgacgggc
gagcgcctcgacgagttcgaagtcttccaccccgaccgcatggcgagccgcatcctcgac
atgggcgacatcctcacgctcatcgagcaggcgcagaaggcattcgacgagcaggaggcg
atgaaggtcgccgagaagctcgcgaccgacgacttcacgctcgacgacttcctccagcag
atgcagcagctgcggaaggccggcaacctcaagcgcatgctcgggatgctccccggcatg
gggcagatgaaggaggcgctcgagaacttcgacgagcgcgagatcaaccgcaccgaggcg
atcatccagtcgatgacgccggaggagcggaggaacccgaagatcctcaacggctcgcgc
cgcgcccgcatcgcccgaggctgcggccgcacggtcaccgacgtgaacgagctcgtgaag
cgcttcgagcaggcctcgaagatgatgaagcaggtcgcccgcggcggcacgccgcagatc
cccggcatgcccgggatgcccggcatgggcggcggccgcgccgcgcagcgcgccgcgcag
aagggcaagaagaagggccaggcccgctcgggcaacccggccaagcgccagcagcaggag
ctcgaggccgcgcagcggccgcagcccggcgccgcgctcggcaagggcgcggccttcggc
ggccccgcggcgtcgatccccgggcagccgacggaggaggagctcgcgcagctccagaag
ttcctcgggcgctag
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integrated database retrieval system
