Pseudoclavibacter triregionum: USB125703_01340
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Entry
USB125703_01340 CDS
T07344
Name
(GenBank) Putative bifunctional exonuclease/endonuclease protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03030
DNA replication
psev03430
Mismatch repair
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USB125703_01340
03430 Mismatch repair
USB125703_01340
03440 Homologous recombination
USB125703_01340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_01340
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01340
Enzymes [BR:
psev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USB125703_01340
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
USB125703_01340
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
USB125703_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAG7845083
LinkDB
All DBs
Position
1:complement(1502083..1502721)
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AA seq
212 aa
AA seq
DB search
MERMPVDFTAIDFETANRSPASACAVGVVKVRDGAVVAREGWLIRPPAGHDAFEPFNVQL
HGVSKERVARAHTWEAQLPRLLDAIGGDVVVAHNAPFDLGVFAAACLATAELMPSAPPPL
EGLCSLRLARRVYELPRYRLPVAAEAAGFTELVHHDPVSDAEGAAAIVVDCARRLEAADV
RDLAAKGGVRLRELDLAARREEALALVEGARF
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatgcccgtcgacttcaccgcgatcgacttcgagaccgcgaaccgctcgccg
gcctcggcgtgcgcggtcggggtcgtgaaggtgcgggacggcgcggtggtcgcgcgcgag
ggatggctcatccgcccgcccgccgggcacgacgcgttcgagccgttcaacgtccagctc
cacggggtctcgaaggagcgcgtcgcgcgggcccacacctgggaggcgcagctgccgcgc
ctgctcgacgcgatcggcggggacgtcgtcgtcgcccacaacgcgcccttcgacctcggc
gtcttcgcggccgcgtgcctcgcgacggccgagctcatgccgtccgctcccccgccgctc
gagggcctgtgctcgctgcggctcgcgcgccgcgtgtacgagctgccccggtaccgcctg
cccgtcgcggccgaggcggcggggttcacggagctcgtccaccacgaccccgtgtcggat
gccgagggggccgcggcgatcgtcgtcgactgcgcgcgccggctcgaggctgcggacgtc
cgcgacctcgccgcgaagggcggggtgcgcctgcgcgagctcgacctcgccgcgcgccgc
gaggaggcgcttgcgctcgtggagggcgcgcggttctag
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