Pseudoclavibacter triregionum: USB125703_01456
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Entry
USB125703_01456 CDS
T07344
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03420
Nucleotide excision repair
psev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
USB125703_01456 (pcrA_2)
03430 Mismatch repair
USB125703_01456 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01456 (pcrA_2)
Enzymes [BR:
psev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
USB125703_01456 (pcrA_2)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
USB125703_01456 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
USB125703_01456 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
SecA_PP_bind
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAG7845199
LinkDB
All DBs
Position
1:1627737..1631162
Genome browser
AA seq
1141 aa
AA seq
DB search
MTTIDPADSTSGAASEPADRLPSFGSRAELHEAIATALAGPGERVFLPTDEQARVLDHVE
GPCLVMAGAGSGKTHTMMLRILTLVVTGEATPSSILGLTFTRKATAELRERVESGLRKLR
AAGLIPASLALESPEISTYNSYANAIYREYALLVGREPDSTLLDEASAWLLMRGLVTASD
DERLASLDLTAPSIASLALELARAARDNGVEPERLARFPEEFRRILELPKSETSKPGAAP
WAPVRDAVPPVEALAPLADLVAAYERRKRERGLIEFSDQVAGAAEIIRRSSAVRGELRAR
ARHIILDEYQDTSAGQVELLAGIFRGANVMAVGDPKQAIYGWRGASPGTMGRFLLDFGGA
PESVLTLSTSWRNDRRILDAANLVASPLPETKPLETGQEIPELSARGDAGDGLIELVDAA
TLEEEAEACAELCADALRAAEAAGDEAPSIAMLFRKRATMGDFASALAERGVPHRIVGLG
GVLASPEVADLVCLLKVTHDPDAGSELIRLLAGARYRVGIADIAALHRLARRVARHTWRR
QEAVIAVARGEADEVDVPELDEDEDFGASLLEALEVVGWSRRERLLADGFSEDGIDRLKA
AERFIQELRELGRLSPVDLIDETIRRAFLDIEIEANPRSASRQRNLDAFVDAVSGLVSSG
EAASLPQLLEWLETASERADLSASEEPAEPGTVQLLTVHAAKGLEWDLVVVPRLLDGDFP
SAPRSSKGWLAKGVLPFELRKDAAALPRLEWRDAATQTEVKEGLAALHDQIKEDAALEER
RLAYVAFTRARSRLVLACSPWTRTRAKASERSPYLVELAEATLLPELAERMAEEPALSEL
EPPAWGRVEHPEWPREAMPADALARARALAEAVRRTVEDAEGERGALGETPWDQTIDLLV
AEAAERRETPLILLPSRLAASRFKDAITDPAEIVDDLRRPMPQKPYRATRLGTKFHAWVE
ERYASAATGGGDVLDLEGLEIGDEDRPLLGLSEVTPEDEAALRPLRETFLASRFADRTPV
SVEQTIELRLGARTIVCKLDAVFENPDGTVEIVDWKTGRVPHGETAEWERQLQLALYTLA
WSKHHEVPVERIRAILYYVADDLELAFDEITSEERLLGLLDEADERLRALRAAEREAVAR
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccatcgaccccgccgactcgacctcgggcgccgcgagcgagcccgccgaccgg
ctcccgagcttcggctcccgggccgagctccacgaggcgatcgcgaccgccctcgccggc
cccggcgagcgcgtcttcctcccgactgacgagcaggcgcgcgtcctcgaccacgtcgag
gggccctgcctcgtcatggccggcgcgggatccggcaagacgcacacgatgatgctgcgc
atcctcaccctcgtcgtgacgggcgaggcgacgccctcgagcatcctcggcctcaccttc
acccggaaggccaccgccgagctgcgcgagcgcgtggagtcaggtctgcggaagctccgc
gcggccgggctcatccccgcctcgctcgcgctcgagagccccgagatctcgacctacaac
tcctacgcgaacgcgatctaccgcgagtacgcgctcctcgtcgggcgcgagcccgactcg
accctcctcgacgaggcgagcgcgtggctgctcatgcgcgggctcgtcaccgcctccgac
gacgagcgcctcgcctccctcgacctcaccgcgccgagcatcgcctcgctcgccctcgag
ctcgcccgcgccgcccgcgacaacggcgtcgagccggagcgcctcgcgcgcttccccgag
gagttccgccgcatcctcgagctccccaagtcggagacctcgaagccgggcgccgcgccc
tgggcgcccgtccgcgacgccgtgccgccggtcgaggcgctcgcgccgctcgccgacctc
gtcgccgcctacgagcggcgcaagcgcgagcgcgggctcatcgagttctccgaccaggtc
gccggcgccgccgagatcatccgccgctcctcggcggtccgcggcgagctgcgcgcgcgt
gcccgccacatcatcctcgacgagtaccaggacacctccgccggccaggtggagctcctc
gccggcatcttccgcggcgcgaacgtcatggccgtcggcgacccgaagcaggccatctac
ggatggcgtggcgcgagccccggcacgatgggccgattcctcctcgacttcggcggcgcc
cccgaatcggtgctcaccctctccacgagctggcgcaacgaccggcgcatcctcgacgcc
gcgaacctcgtcgcctcgccgctgcccgagacgaagccgctcgagaccggccaggagatc
cccgagctctccgcgcgcggcgacgccggcgacgggctcatcgagctcgtcgacgccgcg
acgctcgaggaggaggccgaggcctgcgccgagctctgcgccgacgcgctccgcgcggcg
gaggccgccggcgacgaggcgccgtcgatcgcgatgctcttccgcaagcgcgccaccatg
ggcgacttcgcctcggcgctcgccgagcgcggcgtcccgcaccgcatcgtcgggctcggc
ggcgtcctcgcctcgcccgaggtcgccgacctcgtctgcctcctcaaggtcacgcacgac
cccgacgccggctccgagctcatccgcctcctcgcgggcgcccgctaccgcgtcggcatc
gccgacatcgccgcgctccaccggctcgcgcgccgcgtcgcccgccacacctggcgccgc
caggaggccgtcatcgccgtcgcccgcggcgaggccgacgaggtcgacgtccccgagctc
gacgaggacgaggacttcggcgcgagcctcctcgaagccctcgaggtggtcggatggtcg
cgccgcgagcggctcctcgccgacggcttcagcgaggacggcatcgaccggctcaaggcc
gccgagcgcttcatccaggagctccgcgagctcgggcggctctcgcccgtcgacctcatc
gacgagacgatccgccgcgccttcctcgacatcgagatcgaggcgaacccgcgctccgct
tcgcgccagcggaacctcgacgccttcgtcgatgcggtgtccggcctcgtctcgagcggc
gaggcggcgagcctgccgcagctgctcgaatggctcgagaccgcgagcgagcgggccgac
ctctccgcctccgaggagcctgccgagcccggcaccgtgcagctgctcaccgtgcacgcg
gccaagggcctcgagtgggatctcgtcgtcgtgccgcgcctgctcgacggcgacttcccc
tccgcgccccgcagctcgaaggggtggctcgcgaagggcgtcctcccgttcgagctccgc
aaggacgccgcggcgctcccgcgcctcgagtggcgcgacgccgcgacgcagaccgaggtc
aaagagggcctcgccgccctccacgaccagatcaaggaggacgcggcgctcgaggagcgg
cgcctcgcctacgtcgccttcacccgcgcacgcagccggctcgtcctcgcctgctcgccc
tggacgcgcacccgcgccaaggcctctgagcgttcgccgtacctcgtcgagctcgccgag
gcgacgctcctgcccgagctcgccgagcggatggccgaggagcctgccctctcggagctc
gagccccccgcctggggccgcgtcgagcaccccgaatggccgcgcgaggcgatgcccgcc
gacgccctcgcccgcgcccgcgcgctcgccgaggcggtcaggcggacggtcgaggacgcg
gagggggagcgcggcgcgctcggcgagacgccgtgggaccagaccatcgacctcctcgtc
gccgaggccgccgagcggcgcgagacgccgctcatcctcctgccgtcccgtctcgccgcg
agccgcttcaaggacgccatcaccgaccccgccgagatcgtcgacgacctccgccggccc
atgccgcagaagccgtaccgggcgacccgcctcggcacgaagttccacgcctgggtcgag
gagcgctacgcgagcgcggcgaccggcggcggcgacgtcctcgacctcgagggactcgag
atcggcgacgaggaccgcccgctcctcgggctctcggaggtcacgcccgaggacgaggcc
gccctgcgcccgctccgcgagaccttcctcgcgagccgcttcgccgaccgcaccccggtc
tccgtcgagcagaccatcgagctgcggctcggggcgcggacgatcgtctgcaagctcgac
gccgtattcgagaaccccgacggcaccgtcgagatcgtcgactggaagaccggccgcgtc
ccgcacggcgagaccgccgagtgggagcggcagctgcagctcgcgctctacacgctcgcc
tggtcgaagcaccacgaggtgcccgtcgagcggatccgcgccatcctctactacgtcgcc
gacgacctcgagctcgccttcgacgagatcacgagcgaggagcggctcctcggcctcctc
gacgaggccgacgagcggctgcgggcccttcgcgccgcggagcgggaggcggtggccagg
gcatag
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