Pseudoclavibacter triregionum: USB125703_01502
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Entry
USB125703_01502 CDS
T07344
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
USB125703_01502 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01502 (alkA)
Enzymes [BR:
psev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
USB125703_01502 (alkA)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
USB125703_01502 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
CAG7845244
LinkDB
All DBs
Position
1:1679844..1680827
Genome browser
AA seq
327 aa
AA seq
DB search
MSVPPRPVLEAHLPLPRPYDADGVFAWLAGRAVPGCELAELEGGEGLRYARSLRTPEGIA
FLDVRAAGGHEGGAEALEVAVYGASESAAAAGIVETVARVFDLERDPAEVDAALARDARL
APRIAAVPGMRLPGSFDPAELLVQVLVGQQISVIAARGHVARMASLLGELVSSPIAGLER
VFPSPRAIAEAIGEPGDPADPVDPERILRLPRRTTEAIRQAMLDLDAGTLTIGSDAAALR
DTLVARPGIGPWTAGYASLRLVGDPDAWPSGDVALLEGARRLGIVDRETPKARALRDLDA
AADAWRPWRAYAALHLWRVASGSAGAP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcctccgcggcccgtcctcgaggcgcacctgccgctcccgcggccctatgac
gcggacggggtcttcgcatggctcgccggccgcgccgtgcccggatgcgagctcgccgag
ctcgagggcggcgagggcctccgctacgcccgctcgctgcggacgcccgaggggatcgcc
ttcctcgacgtgcgggcggccggcggtcacgagggaggggccgaggcgctcgaggtggcc
gtctacggcgccagcgagtcggcggcggcggcggggatcgtcgagaccgtcgcgcgcgtc
ttcgacctcgagcgcgacccggccgaggtcgacgccgcgctcgcccgcgacgcgcggctg
gcgccccgcatcgcggccgtgcccgggatgcggctgcccggctccttcgacccggcggag
ctcctcgtgcaggtcctcgtgggccagcagatctcggtcatcgcggcgcgcgggcatgtg
gcgcggatggcgtccctcctcggcgagctggtctcctcgccgatcgcgggcctcgagcgc
gtcttcccgtcgccgcgggcgatcgcggaggcgatcggcgagccgggcgacccggcggat
cccgtggacccggagcgcatcctgcggctgccgcggcgcacgaccgaggcgatccggcag
gccatgctcgacctcgacgccgggacgctcacgatcgggagcgacgcggccgcactccgc
gacacgctcgtggcgcggcccggcatcgggccgtggacggccggctacgcctcgctccgg
ctcgtcggcgacccggacgcctggccctccggcgacgtcgccctgctcgagggcgcgcgg
cggctcggcatcgtcgaccgcgagacgccgaaggcgcgggcgctgcgggatctcgacgcg
gcggccgatgcctggcggccctggcgtgcctacgcggcgctccacctctggcgcgtcgcc
tccggctccgccggcgcgccgtag
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