Pseudoclavibacter triregionum: USB125703_01608
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Entry
USB125703_01608 CDS
T07344
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psev03016
]
USB125703_01608 (truB)
Enzymes [BR:
psev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
USB125703_01608 (truB)
Transfer RNA biogenesis [BR:
psev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
USB125703_01608 (truB)
Prokaryotic type
USB125703_01608 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAG7845346
LinkDB
All DBs
Position
1:1793105..1794103
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AA seq
332 aa
AA seq
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MAGDMPQDPSRAPHGIALVDKPAGRTSHDVVAWARKSLGTRKVGHAGTLDPMATGLLVLG
VGHATRLLTFLVGEDKEYLATIRLGQTTTTEDAEGELLETAEPALVDALDETRVASAMAS
LTGELDQVPSAVSAIKVDGVRAYKRVRDGEQVELAARRVTIREFERLGMRRETLGGAGDD
GFAQVLDVDVRVVCTSGTYIRALARDLGEALGVGAHLTALRRTRVGAFRVEEAATTDDPL
PREALMPSAEVAGRRFGVLDLTEQEAIDLGHGKRIDVPAGAPEGESPLAGIAPDGRLVGL
VGVSGSTAKSILNFPAEEPAAEPAERVEEAGA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgacatgcctcaggatcctagccgcgccccgcacggcatcgccctcgtcgac
aagcccgccggacgcacgagccacgacgtcgtcgcctgggcccggaagagcctcggcacc
cgcaaggtcgggcacgccggcaccctcgatccgatggcgacgggcctgctcgtgctcggc
gtcggccacgcgacgcgcctgctcaccttcctcgtcggcgaggacaaggagtacctcgcg
acgatccgcctcggccagacgacgacgaccgaggacgccgagggcgagctccttgagacg
gccgagccggccctcgtcgacgccctcgacgagacgcgcgtcgcctcggccatggcgtcc
ctcaccggcgagctcgaccaggtgccctcggccgtgagcgcgatcaaggtcgacggcgtc
cgcgcctacaagcgggtgcgcgacggcgagcaggtggagctcgcggcgcggagggtgacg
atccgcgagttcgagcggctcgggatgcggcgggagacgctcggcggcgcgggcgacgac
ggcttcgcgcaggtgctcgacgtggacgtccgcgtcgtgtgcacctccggcacgtacatc
cgggcgctcgcccgcgacctcggcgaggcgctcggagtcggcgcgcacctcacggcgctg
cgccgcacccgggtcggcgccttccgcgtcgaggaagctgcgacgactgacgatccgctc
ccccgcgaggcgctcatgccgagcgcggaggtcgcgggacgccgcttcggcgtgctcgac
ctcacggagcaggaggccatcgacctcggccacggcaagcgcatcgacgtgccggccggc
gcgcccgaaggggagagccccctcgcgggcatcgccccggacggccgcctcgtcgggctc
gtcggcgtctccgggagcacggcgaagtcgatcctgaacttcccggcggaggagccggcc
gcggagccggccgagcgcgtcgaggaggcgggcgcatga
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