Pseudoclavibacter triregionum: USB125703_01647
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Entry
USB125703_01647 CDS
T07344
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
USB125703_01647 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01647 (recO)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
USB125703_01647 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
USB125703_01647 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CAG7845385
LinkDB
All DBs
Position
1:1834199..1835062
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AA seq
287 aa
AA seq
DB search
MPSYRDEAVVLRTHRLGEADRIVTMLGRERGKLRAVAKGVRRTSSKFGARLEPFMVVDLQ
CWEGRSLDTVQQAVSLAQYGADIAADYDAYAAASAMVETADRITDADASSDQYFLLIGAL
RALARRDHLPERVLDSYLLRALSLAGWRPSFDACAKCGLPGPHDRFSAPLGGAVCRRCAK
GGAVHVSTETLALMEALLAGEWDAVDAAPEELSGRASALIAAYAQFHLEKGLRSLDVIDR
ERHGALAATAPARAAADTSDAGHPAGPAAGPLPGPPSAPSAEGARAS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccgagctatcgagacgaggcggtggtcctccgcacccaccggctgggcgaggccgac
cgcatcgtcaccatgctcggccgcgagcggggcaagctccgcgccgtggcgaagggcgtc
cgccgcacctcctcgaagttcggggcgcgcctcgagcccttcatggtcgtcgacctccag
tgctgggagggccgctcgctcgacaccgtgcagcaggccgtctcgctcgcgcagtacggc
gccgacatcgccgccgactacgacgcctatgccgccgcgagcgccatggtcgagaccgcc
gaccggatcaccgacgccgacgcctcgagcgaccagtacttcctcctcatcggcgcgctg
cgggccctcgcccgccgcgaccacctgccggagcgcgtgctcgactcgtacctgctccgg
gcgctctcgctcgccggctggcggccgagcttcgacgcctgcgcgaagtgcgggctgccg
ggcccgcacgaccgcttctcggcgcccctcggcggggccgtgtgccgcaggtgcgcgaag
ggcggcgccgtccacgtctcgaccgagacgctcgcgctgatggaggcgctcctcgcaggg
gagtgggacgccgtcgacgccgcccccgaggagctctcgggccgcgcctccgcgctcatc
gccgcctacgcccagttccacctcgagaagggcctgcgctcgctcgacgtcatcgaccgc
gagcggcacggggccctcgcggcgacggcgcccgcccgcgcggccgccgacacgtccgac
gccggccaccccgccggccccgccgccgggcccctgcccggcccaccgagtgccccgagc
gcggaaggagcacgcgcgtcatga
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