Pseudoclavibacter triregionum: USB125703_01764
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Entry
USB125703_01764 CDS
T07344
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
USB125703_01764 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01764 (ruvB)
Enzymes [BR:
psev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
USB125703_01764 (ruvB)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
USB125703_01764 (ruvB)
RecFOR pathway proteins
USB125703_01764 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
Sigma54_activ_2
AAA_22
AAA_14
nSTAND3
AAA_18
AAA_3
MCM
DUF815
Zeta_toxin
Rad17
AAA_33
IstB_IS21
RNA_helicase
AAA_28
GGDEF_2
NTPase_1
TsaE
AAA_17
AAA_25
ABC_tran
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
CAG7845494
LinkDB
All DBs
Position
1:1964910..1965923
Genome browser
AA seq
337 aa
AA seq
DB search
MSERDDLLEPVPESDAELAFEGALRPRTLAEFVGQQKVRTQLDLLIRAAALQGRAPDHIL
LAGPPGLGKTTLAMILAEETGHPIRLTSGPALQHAGDLASVLSSLVQGEILFIDEIHRMA
RTAEEMLYLAMEDFRIDIMVGKGAGATSVPLELAPFTVVGATTRAGLLPNPLRDRFGFTA
HLEFYEQAELEDVIRRAARLLDLELPGPALAAIARRSRGTPRIANRLLRRVRDFALVHER
PADAAAVDDALLLYDVDELGLDRLDRAVLEGLVDRFAGGPVGVRTLAVSIGEEPETIESV
VEPFLVRVGLVARTPRGRIATRAAYAHLGRPAPADAV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgcgacgacctcctcgagccggtccccgagtcggacgccgagctcgccttc
gagggcgccctccgcccgcgcacgctcgccgagttcgtcggccagcagaaggtgcgcacg
cagctcgacctcctcatccgcgccgccgcgctccagggccgcgcgcccgaccacatcctc
ctcgcgggccctcccggcctcggcaagacgacgctcgcgatgatcctcgccgaggagacg
gggcatccgatccgtctcacctcgggccccgcgctccagcacgcgggcgacctcgcctcg
gtgctctcgagcctcgtgcagggggagatcctcttcatcgacgagatccaccgcatggcc
cgcaccgccgaggagatgctctacctcgcgatggaggacttccgcatcgacatcatggtc
ggcaagggcgcgggcgccacgagcgtgccgctcgagctcgcgccgttcacggtcgtcggc
gcgacgacgcgggcggggctcctcccgaacccgctccgcgatcgcttcggcttcacggcg
cacctggagttctacgagcaggccgagctcgaggacgtcatccggcgcgccgcccgcctg
ctcgacctcgagctgccgggccccgcgctcgccgcgatcgcccgccgctcgcgcggcacg
ccccgcatcgcgaaccggctcctgcgccgcgtgcgcgacttcgcgctcgtccacgagcgc
ccggccgacgcggccgccgtcgacgacgcgctcctcctctacgacgtcgacgagctcggc
ctcgaccgcctcgaccgcgccgtgctcgagggcctcgtcgaccgcttcgccgggggaccg
gtcggcgtgcggacgctcgcggtctcgatcggggaggagccggagacgatcgagtcggtc
gtcgagcccttcctcgtgcgcgtcgggctcgtcgcccggaccccgcgcggccgcatcgcg
acccgggccgcctacgcgcacctcgggcgacccgcgccggccgacgcggtctga
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