Pseudoclavibacter triregionum: USB125703_01825
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Entry
USB125703_01825 CDS
T07344
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03030
DNA replication
psev03410
Base excision repair
psev03420
Nucleotide excision repair
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USB125703_01825 (polA)
03410 Base excision repair
USB125703_01825 (polA)
03420 Nucleotide excision repair
USB125703_01825 (polA)
03440 Homologous recombination
USB125703_01825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_01825 (polA)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01825 (polA)
Enzymes [BR:
psev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USB125703_01825 (polA)
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
USB125703_01825 (polA)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
USB125703_01825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
USB125703_01825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CAG7845554
LinkDB
All DBs
Position
1:2033292..2035976
Genome browser
AA seq
894 aa
AA seq
DB search
MTEQTKPTLMVIDGHSLAFRAFFALPVDSFVTADGQHTNGIHGFISMLLTLLKDEDPTHL
AVAFDISRHSFRTREYPEYKATRDATPPEFKGQVPLLIDALHAMGVQTLTKEDYEADDIL
ATLARRGREEGFKVLVVSGDRDTIQLVTDDVTLLYPSTQGVSKLKRYDPEAVQERYGIRP
EQYPDIAALVGEKSDNLPGVPKVGEKTAAKWVNQWGSLQAIVEHEDEIGGKVGESFREHK
EEALRNRRLNRLVDDVELPVGPADLERGRIDVEAVREVFTRLQFRTLQERVLKLAAEDGA
EPSDRAEEAAAKVPVRPNLIDEELAAWIRVQEKACPDGLGLELLELGEDRYRVGLAGEEA
TSFEWKPGGHDYALFEEWLRSDSPKRMFDAKPQLKSFMDAGVELGGQVVDAQVSAWLTRP
QNAPKRLAELVQQMLDEQLPEGDPNELLSVEAIEGGDDAERDFAASDAWYLRRAGRAADE
RLPEPTRSVLSDIEAPLEPVLARMERQGVAIDRELLQGLADDLSERIVGYEKAAFEAIGG
TEINLGSPKQLQTVLFEQLEMPKTRKTKTGYSTDADSLAELERTSPHPFLGALRQHRDAT
KLRSMMETLLKAIRADGRIHTTYVQTGSATGRLASTDPNLQNIPIRSEEGRQVRRAFVHG
EGFETLFTADYSQVEMRIMAHLSGDDALIEAFNRGEDLHRFVGSQVFGVAPEDVTPAMRS
KVKAMSYGLAYGLSAFGLSKQLQIEVSEAKDLMAGYFSRFGEVRDYLRNVVLQAREDGYT
ETIFGRRRPFPDLNSTNRLARENAERAALNSPIQGSAADIIKVAMLGVDRRIREEGLGSR
MLLQVHDELVLEAAPGEVDDLEQIVREEMGGAAKLSVPLDVNVGSGPNWDEAGH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagcaaacgaagcccaccctcatggtcatcgacgggcactcgctcgccttccgc
gcgttcttcgccctcccggtcgactccttcgtcaccgccgacgggcagcacacgaacggc
atccacggcttcatctcgatgctcctcaccctgctcaaggacgaggacccgacccacctc
gccgtcgccttcgacatctcgcggcactccttccgcacccgcgagtaccccgagtacaag
gccacccgcgacgcgacgccgccggagttcaagggccaggtgccgctcctcatcgacgcg
ctccacgccatgggcgtgcagacgctcacgaaggaggactacgaggccgacgacatcctc
gccacgctcgcccgccgcggccgcgaggagggcttcaaggtgctcgtcgtctcgggcgac
cgcgacacgatccagctcgtcaccgacgacgtgaccctgctctacccctcgacgcagggc
gtctcgaagctcaagcgctacgacccggaggccgtgcaggagcgctacggcatccgcccc
gagcagtaccccgacatcgccgcgctcgtcggcgagaagagcgacaacctcccgggcgtc
ccgaaggtcggcgagaagaccgcggcgaagtgggtcaaccagtggggctcgctgcaggcc
atcgtcgagcacgaggacgagatcggcggcaaggtcggcgagtcgttccgcgagcacaag
gaggaggcgctgcggaaccgccgcctcaaccgcctcgtcgacgacgtcgagctgcccgtc
gggcccgccgacctcgagcggggccggatcgacgtggaggcggtgcgcgaggtgttcacg
cgcctccagttccgcacgctccaggagcgggtgctcaagctcgccgccgaggacggcgcc
gagccctccgaccgcgccgaggaggccgccgcgaaggtgccggtgcgcccgaacctcatc
gacgaggagctcgccgcctggatccgcgtgcaggagaaggcgtgccccgacggcctcggg
ctcgagctgctggagctcggcgaggaccgctaccgcgtcggcctcgccggcgaggaggcg
acgagcttcgagtggaagccgggcggccacgactatgccctcttcgaggagtggctgcgc
tccgactccccgaagcggatgttcgacgcgaagccgcagctcaagtcgttcatggacgcc
ggcgtcgagctcggcggccaggtcgtcgacgcgcaggtgagcgcgtggctcacgcgcccc
cagaacgcgccgaagcgcctcgccgagctcgtgcagcagatgctcgacgagcagctgccc
gagggggacccgaacgagctgctctccgtcgaggcgatcgagggcggcgacgacgccgag
cgcgacttcgccgcgagcgacgcgtggtacctccgccgcgccggccgggccgccgacgag
cgcctgcccgagccgacgcgatcggtgctctcggacatcgaggcgccgctcgagccggtg
ctcgcgcgcatggagcgccagggcgtcgcgatcgaccgcgagctcctccagggcctcgcc
gacgacctctccgagcggatcgtcggctacgagaaggccgccttcgaggccatcggcggc
accgagatcaacctcggctcgccgaagcagctccagaccgtgctcttcgagcagctcgag
atgccgaagacccgcaagacgaagaccggctactcgaccgacgccgactcgctcgccgag
ctcgagcgcacctcgccgcaccccttcctcggggcgctgcgtcagcaccgcgacgcgacg
aagctgcgctcgatgatggagacgctgctcaaggccatccgggccgacgggcgcatccac
accacctacgtgcagacgggctctgcgacggggcgcctcgcctcgaccgacccgaacctc
cagaacatcccgatccgctcggaggagggacgccaggtgcgccgcgccttcgtgcacggc
gagggcttcgagacgctcttcacggccgactactcgcaggtcgagatgcgcatcatggcg
cacctctcgggcgacgacgcgctcatcgaggcgttcaaccgcggcgaggacctccaccgc
ttcgtcggctcgcaggtcttcggcgtcgcgccggaggacgtcaccccggcgatgcgctcg
aaggtgaaggcgatgtcgtacggcctggcctacgggctctcggccttcggcctctcgaag
cagctgcagatcgaggtctccgaggcgaaggacctcatggcgggctacttctcgcgcttc
ggcgaggtgcgcgactacctccggaacgtcgtgctccaggcgcgcgaggacggctatacg
gagacgatcttcggccgccgccgtcccttccccgacctcaactcgacgaaccggctcgcg
cgcgagaacgccgagcgcgcggcgctcaactcgccgatccagggctcggccgccgacatc
atcaaggtcgccatgctcggcgtcgaccggcgcatccgcgaggaggggctcggctcgcgc
atgctcctccaggtgcacgacgagctcgtgctcgaggccgcgcccggggaggtcgacgac
ctcgagcagatcgtccgcgaggagatgggcggggccgcgaagctctccgtgccgctcgac
gtgaacgtcggctcgggcccgaactgggacgaggccggccactga
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