Entry |
|
Symbol |
uvrA_1
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
psev Pseudoclavibacter triregionum
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:psev00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
USB125703_01844 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:psev03400]
USB125703_01844 (uvrA_1)
DNA repair and recombination proteins [BR:psev03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
USB125703_01844 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
USB125703_01844 (uvrA_1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:2056549..2059542
|
AA seq |
997 aa
MSSIRIQGARVHNLKNVDLDVPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAY
ARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLWARIGVPHC
PVCGEVIARQTVQQIADRLMELEQGTRFQILAPVVRQKKGEFVDLFSSLSSQGFARALVD
GERVQLTDPPTLKKSFKHDISVIVDRLVASDDMLGRLTDSLETALKLADGLVEIDFVDDD
SADGRVLYSEHLSCPNQHPIALSEIEPRTFSFNAPFGACPACDGLGTKMAVDAELVLGDP
ESSIGDGVIIPWTSQGKSLYQYYERLLAGLSDELGFSLKTPWKELDPEIREAVLNGRDFQ
IQVTYRNRFGRQRTYTSGFEGVLPYIERQYAEAESDSARARWAEYLREIPCDACQGARLK
PEVLAVRINGRSIADVTTLSLDDCLEFMDTVQLDARETKIAAQVLREIRARLVFLIEVGL
SYLDLARAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIETLVKLR
DLGNTLIVVEHDEDTIRTADWVVDIGPGAGEHGGEVVHSGTYAQLTRNRRSITGDYLAGR
RAITTPAKRRPVDPERMVTVVGARANNLKDVTAEFPLGVFTAVTGVSGSGKSTLVNDILY
RVLATRLNGARKVAGKHTRITGVDRLDKVVHVDQAPIGRTPRSNPATYTGVFDRIRTLFA
ETQEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGGSRYNRETL
QVHYKGKNISEVLDMPIAEAAEFFEPITAIHRYLQTLVEVGLGYVRLGQSATTLSGGEAQ
RVKLATELQRRSNGRTVYVLDEPTTGLHFEDVRKLLLVLDGLVDKGNTVIVIEHNLDVIK
SADWIIDMGPEGGAGGGTVLAEGTPEQIAGVAASHTGSFLKEIFEAEGRPLEAPAAKKPA
AKRASAKASAGAKEPAAKPATAKRATSRTPRAKGGAA |
NT seq |
2994 nt +upstreamnt +downstreamnt
atgtcctcgatccgcatccagggcgccagggtccacaacctcaagaacgtcgacctcgac
gtgccgcgggacagcctcgtcgtcttcacggggctgtccggctccggcaagtcgtccctc
gccttcgacacgatcttcgccgagggccagcgacgctacgtcgagtcgctctccgcgtac
gcgcgccagttcctcggccaggtcgacaggccggatgtcgatttcatcgagggcctcagc
cccgccgtgtccatcgaccagaagtcgacgaaccgcaacccgcgctcgacggtcggcacg
atcaccgagatctacgactacctgcgcctgctctgggcgcgcatcggcgtgccgcactgc
ccggtctgcggcgaggtcatcgcgcgccagacggtccagcagatcgccgaccggctcatg
gagctcgagcagggcacgcgcttccagatcctcgccccagtcgtccggcagaagaagggc
gagttcgtcgacctcttctcgagcctctccagccagggcttcgcgcgcgccctcgtcgac
ggcgagcgcgtgcagctgaccgacccgccgacgctgaagaagtcgttcaagcacgacatc
tcggtcatcgtcgaccgcctcgtcgcgagcgacgacatgctcggccgcctcaccgactcg
ctcgagacggccctcaagctcgccgacgggctcgtcgagatcgacttcgtcgacgacgac
tcggcggatggccgggtgctctactccgagcacctcagctgcccgaaccagcaccccatc
gcgctctccgagatcgagccgcgcacgttctcgttcaacgcgcccttcggcgcctgcccg
gcctgcgacggcctcggcacgaagatggccgtcgacgcggagctcgtgctcggcgacccg
gagtcctcgatcggcgacggcgtcatcatcccgtggacgagccagggcaagagcctctac
cagtactacgagcggctcctcgccggcctcagcgacgagctcggcttctcgctgaagacg
ccgtggaaggagctcgaccccgagatccgcgaggcggtgctcaacgggcgcgacttccag
atccaggtgacgtaccgcaaccgcttcggccgccagcgcacctacacctccggcttcgag
ggcgtgctgccctacatcgagcgccagtacgccgaggccgagagcgactcggcgcgcgcc
cgctgggccgagtacctgcgcgagatcccctgcgacgcctgccagggcgcgcgcctcaag
cccgaggtgctcgccgtgcgcatcaacggccgctcgatcgccgacgtcacgacgctgagc
ctcgacgactgcctcgagttcatggacaccgtgcagctcgacgcgcgagagacgaagatc
gcggcgcaggtgctgcgcgagatccgtgcccgcctcgtcttcctcatcgaggtcggcctc
agctacctcgacctcgcgcgcgcggccgggacgctctcgggcggcgaggcccagcgcatc
cgcctcgccacgcagatcggctccggcctcacgggcgtcctctacgtgctcgacgagccc
tcgatcggcctccaccagcgcgacaaccgccgcctcatcgagacgctcgtgaagctccgc
gacctcggcaacacgctcatcgtcgtcgagcacgacgaggacacgatccgcaccgccgac
tgggtcgtcgacatcggcccgggcgcgggggagcacggcggcgaggtcgtccactcgggc
acctacgcgcagctcacgaggaaccgccgctccatcacgggcgactacctcgccggccgc
cgcgcgatcacgacgcccgcgaagcgccgccccgtcgaccccgagcggatggtcaccgtc
gtcggcgcccgcgcgaacaacctcaaggacgtcaccgcggagttcccgctcggcgtcttc
accgccgtcacgggcgtctccggctccggcaagtcgaccctcgtgaacgacatcctctac
cgcgtgctcgccacgcgcctcaacggggcgcgcaaggtcgccggcaagcacacgcgcatc
accggcgtcgaccggctcgacaaggtcgtccacgtcgaccaggcgccgatcggccgcacg
ccgcgctcgaacccggcgacctacacgggcgtcttcgaccgcatccgcaccctcttcgcc
gagacgcaggaggcgaaggcccgcggctacctgccgggccgcttctccttcaacgtgaag
ggcggacggtgcgaggcgtgctccggcgacggcacgatcaagatcgagatgaacttcctc
cccgacgtctacgtcgcgtgcgaggtctgcgggggatcgcgctacaaccgcgagacgctt
caggtgcactacaagggcaagaacatctccgaggtgctcgacatgccgatcgccgaggcg
gccgagttcttcgagccgatcacggccatccaccgctacctgcagacgctcgtcgaggtc
ggcctcggctacgtgcggctcggccagtcggcgacgaccctctccggcggcgaggcgcag
cgcgtcaagctcgcgaccgagctccagcgccgctcgaacggccgcaccgtctacgtgctc
gacgagccgacgacgggcctccacttcgaggacgtccgcaagctcctcctcgtgctcgac
gggctcgtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgacgtcatcaag
tcggccgactggatcatcgacatgggccccgagggcggcgccggcggcggcaccgtgctc
gccgagggcacgccggagcagatcgccggcgtcgcggcgagccacacgggctcgttcctc
aaggagatcttcgaggccgagggccgcccgctcgaggcgccggcggcgaagaagcccgcg
gccaagcgcgcgagcgcgaaggcgtccgcgggcgcgaaggagcccgcggcgaagcccgcg
accgcgaagcgcgcgacctcccgcacgccgcgcgcgaagggcggcgccgcgtag |