Pseudoclavibacter triregionum: USB125703_01883
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Entry
USB125703_01883 CDS
T07344
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03030
DNA replication
psev03430
Mismatch repair
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USB125703_01883 (polC)
03430 Mismatch repair
USB125703_01883 (polC)
03440 Homologous recombination
USB125703_01883 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_01883 (polC)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_01883 (polC)
Enzymes [BR:
psev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USB125703_01883 (polC)
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
USB125703_01883 (polC)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
USB125703_01883 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CoaE
Motif
Other DBs
NCBI-ProteinID:
CAG7845612
LinkDB
All DBs
Position
1:complement(2097368..2098078)
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AA seq
236 aa
AA seq
DB search
MTELAPWTSRLAVFDTETTGVDPLEARIVTAFVGLIDENGEVERGTDWLADPGVEIPEQA
AAVHGITTEMAREEGEPAAEVIAKVRASIEWIARNRVPLVVFNAPYDLTLLDAECRRHGM
EPVSPLLGPQVVDPLVIDKAIDRYRKGKRTLVDQAAAYGVELLDAHSAADDAIAGGQVAL
AIARAFPDEVGQMPLEELHRRQAAWFDEQAADFEDYMRRQRDPAFSAPRGWPVRSA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctcgccccctggacctcccgcctcgccgtcttcgacaccgagacgaccggc
gtcgacccgctcgaggcccggatcgtcacggccttcgtcggcctcatcgacgagaacggc
gaggtcgagcgcggcaccgactggctcgccgacccgggcgtggagatccccgagcaggcc
gcggccgtgcacggcatcacgaccgagatggcgcgggaggagggcgagccggcggcggag
gtcatcgcgaaggtgcgcgcctcgatcgagtggatcgcccggaaccgggtgccgctcgtc
gtcttcaacgcgccctacgacctcaccctcctcgacgccgagtgccgccggcacggcatg
gagccggtgtcgccgctgctcggtccgcaggtcgtcgacccgctcgtcatcgacaaggcc
atcgaccgctatcgcaaggggaagcggacgctcgtcgaccaggccgccgcgtacggcgtc
gagctgctcgacgcgcactcggccgccgacgacgcgatcgccggcgggcaggtcgcgctc
gcgatcgcgcgggccttcccggacgaggtcggccagatgccgctcgaggagctgcaccgc
cgccaggccgcctggttcgacgagcaggccgccgacttcgaggactacatgcgccgccag
cgcgacccggccttctccgcgccccgcggctggcccgtgcggtcggcgtag
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