Pseudoclavibacter triregionum: USB125703_02022
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Entry
USB125703_02022 CDS
T07344
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev00061
Fatty acid biosynthesis
psev00071
Fatty acid degradation
psev01100
Metabolic pathways
psev01212
Fatty acid metabolism
psev02024
Quorum sensing
psev04146
Peroxisome
Module
psev_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
USB125703_02022
00071 Fatty acid degradation
USB125703_02022
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
USB125703_02022
09145 Cellular community - prokaryotes
02024 Quorum sensing
USB125703_02022
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psev01004
]
USB125703_02022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psev04147
]
USB125703_02022
Enzymes [BR:
psev01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
USB125703_02022
Lipid biosynthesis proteins [BR:
psev01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
USB125703_02022
Exosome [BR:
psev04147
]
Exosomal proteins
Exosomal proteins of breast milk
USB125703_02022
Exosomal proteins of breast cancer cells
USB125703_02022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AraC_N
Motif
Other DBs
NCBI-ProteinID:
CAG7845747
LinkDB
All DBs
Position
1:2241320..2243152
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AA seq
610 aa
AA seq
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MSAMKRSETPAVVTADPTLNTTDLLRRRLELSPDRPLFAVPEGDGWRDIPARVFGEEVLA
LAKGFAAAGLEPGDRVAFIAQTGYRWTLVDFALWTAGLVMVPVYETSSTAQLEWMLEDSG
TVGIITELPEHTAMADDAAKDVPAVRFRAALHDGAIESLSKDGEGFSDEEIERRRSLAGE
DDIATLIYTSGSTGRPKGCVLTHGNFVELARNAEEPLADLIGEGSSTLLFITLAHVLARF
ISVLCVYAGVKVGHQPNTANLVPSLGTFKPSFLLAVPRVFEKVYNSAEQKADAEGRGKIF
RRAATVGVAYSRALDKGKVPLGLKLQYALYDRLVFAKLRKVMGGRVEHAVSGSAPLGNYL
GHFYRAIGVKIMEGYGLTETTAPVSVNLPRASKIGTVGPALPGCAIRIDEDGEILTKGVN
VFREYWKNEEATKAAFTEDGWFRTGDIGRLDEDGYLTVTGRKKEIIVTAGGKNVSPATLE
DPVRSDPLVGQIVVVGDQRPFIAALITLDPEMLRNWLQQHGENPDMPLSEAAQHPKVLAE
IQHSIDRANTRVSRAESIRKFVVLDEEFTEANGTLTPKLSIRRHVILEKYAGVIDGIYNV
APPTRGISLK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgaagcggtcagagacccccgccgtcgtcacggccgaccccacgctcaac
acgacggatctgctccgccgccgcctcgagctctcccccgaccgcccgctcttcgcggtg
cccgagggcgacggctggcgcgacatccccgcgcgcgtcttcggcgaggaggtgctcgcg
ctcgcgaagggcttcgccgcggcgggcctcgagcccggcgaccgggtggccttcatcgcg
cagaccggctaccgctggacgctcgtcgacttcgccctctggaccgccggcctcgtcatg
gtgcccgtctacgagacgagctcgaccgcccagctcgagtggatgctcgaggactccggc
accgtcggcatcatcaccgaactccccgagcacaccgcgatggccgacgacgccgcgaag
gacgtcccggccgtgcgcttccgcgccgccctccacgacggcgccatcgagtcgctctcg
aaagacggcgagggcttctccgacgaggagatcgagcgccgccgctcgctcgcgggcgag
gacgacatcgcgacgctcatctacacctccggctcgacgggccgccccaagggctgcgtg
ctcacgcacggcaacttcgtcgagctcgcccgcaacgccgaggagccgctcgcggacctc
atcggcgagggctcctcgacgctcctgttcatcacgctcgcgcacgtgttggcccgcttc
atctcggtgctctgcgtgtacgcgggcgtgaaggtcggccaccagccgaacaccgcgaac
ctcgtgccctcgctcggcaccttcaagccctccttcctcctcgccgtcccgcgcgtattc
gagaaggtctacaactcggccgagcagaaggccgacgcggagggccgcgggaagatcttc
cgccgagccgcgaccgtcggcgtcgcgtactcgcgcgcgctcgacaagggcaaggtgccc
ctcggcctgaagctccagtacgcgctctacgacaggctcgtcttcgcgaagctccgcaag
gtcatgggcggccgcgtcgagcacgccgtgtcgggctcggccccgctcggcaactacctc
ggccacttctaccgcgccatcggcgtgaagatcatggagggctacggcctcaccgagacg
accgcccccgtgtcggtgaacctcccccgcgcatcgaagatcggcaccgtcggccccgcg
ctgccgggctgcgccatccgcatcgacgaggacggcgagatcctcacgaagggcgtcaac
gtcttccgcgagtactggaagaacgaggaggccacgaaggcggccttcaccgaggacggc
tggttccgcacgggcgacatcggccgcctggacgaggacggctacctcacggtcacgggc
cgcaagaaggagatcatcgtcacggccggcggcaagaacgtctcgcccgccacgctcgag
gacccggtgcgctccgacccgctcgtcggccagatcgtcgtcgtcggcgaccagcgcccc
ttcatcgcggcgctcatcacgctcgacccggagatgctccgcaactggctccagcagcac
ggcgagaacccggacatgccgctctccgaggccgcgcagcacccgaaggtgctcgccgag
atccagcactcgatcgaccgggcgaacacgcgcgtctcgcgcgcggagtccatccgcaag
ttcgtcgtcctcgacgaggagttcacggaggcgaacggcacgctcacgccgaagctctcg
atccgccgccacgtgatcctcgagaagtacgcgggcgtcatcgacggcatctacaacgtg
gccccgcccacgcgcggcatctcgctgaagtag
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