Pseudoclavibacter triregionum: USB125703_02075
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Entry
USB125703_02075 CDS
T07344
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psev03009
]
USB125703_02075
Enzymes [BR:
psev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
USB125703_02075
Ribosome biogenesis [BR:
psev03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
USB125703_02075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Cuticle_1
DUF5850
Motif
Other DBs
NCBI-ProteinID:
CAG7845799
LinkDB
All DBs
Position
1:complement(2296590..2297615)
Genome browser
AA seq
341 aa
AA seq
DB search
MDARAEREALRAARASRPEGGWSLDDFDDIPMPRAGGHRDGAGERAPRNAQHGDPYRGSL
PADPREGEEAGTVRLQKALANAGVASRRVCEDLIAKGRVEVNGEIVTELGSRIDPTKDRV
FVDGQAVQFDQTMRYIILNKPTGVVSSLKDEQGRPDLRRFTREFSERLYNVGRLDAETSG
LLVLTNDGELANILAHPSYGVEKTYVAKVRGRLAPGTLERLKRGIELEDGPIRIDSGKIL
AGQATKDATLVEVTLHSGRNRIVRRMLDAVGHPVLELVRRSFGPLHLGTLRAGEMREVTP
DELRKLVTLARRAERRPEEPAGDAGRSSDPERLRDDRGGRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccgcgccgagcgcgaggccctccgcgccgcccgcgcctcccgccccgagggc
ggctggagcctcgacgacttcgacgacatccccatgccgcgcgccggcggccaccgagac
ggcgcgggcgagcgggctccgcgcaatgcgcagcacggcgacccctaccgcggcagcctc
cccgccgacccgcgcgagggggaggaggccggcaccgtccgcctccagaaggcgctcgcg
aacgccggcgtcgcgagccgccgcgtctgcgaggacctcatcgcgaagggccgcgtcgag
gtgaacggcgagatcgtcaccgagctcggctcgcgcatcgacccgacgaaggaccgcgtc
ttcgtcgacggccaggccgtgcagttcgaccagacgatgcgctacatcatcctcaacaag
ccgacgggcgtggtctcctcgctcaaggacgagcagggccggcccgacctgcgccgcttc
acgcgcgagttctccgagcgcctctacaacgtgggccgcctcgacgcggagacgagcggg
ctgctcgtgctcacgaacgacggcgagctcgcgaacatcctcgcccacccctcctacggc
gtggagaagacctacgtcgcgaaggtgcgcggacgcctcgcccccggtaccctcgagcgc
ctcaagcgcggcatcgagctcgaggacgggcccatccgcatcgactcgggcaagatcctc
gccggccaggcgacgaaggacgcgacgctcgtcgaggtgacgctccactcgggacgcaat
cgcatcgtgcgccgcatgctcgatgccgtcgggcatcccgtgctcgagctcgtgcggcga
tccttcgggccgcttcacctcggcacgctccgcgccggcgagatgcgcgaggtcaccccg
gacgagctccgcaagctcgtcaccctggcccgccgcgccgagcgccgcccggaggagccg
gcgggggacgccggccgaagctccgacccggagcggctccgcgacgaccgaggaggacgc
cgatga
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integrated database retrieval system
