Paracoccus seriniphilus: JHW44_00075
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Entry
JHW44_00075 CDS
T08801
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW44_00075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psew03019
]
JHW44_00075 (recQ)
03400 DNA repair and recombination proteins [BR:
psew03400
]
JHW44_00075 (recQ)
Enzymes [BR:
psew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHW44_00075 (recQ)
Messenger RNA biogenesis [BR:
psew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHW44_00075 (recQ)
DNA repair and recombination proteins [BR:
psew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JHW44_00075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
zf-CXXC
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCR13924
LinkDB
All DBs
Position
complement(14764..16797)
Genome browser
AA seq
677 aa
AA seq
DB search
MPTDLLRQVWGFDGFRPGQREIVETVASGQDVLAIMPTGGGKSLCYQLPALMREGVTVVI
SPLIALMRDQVRALREAGVSAGALTSGNTHDETDAVFQSLEQGALKLLYMAPERLASGGT
LQLLRRAGVTAIAVDEAHCVSQWGHDFRPDYLRIGELKRDLGVPLSAFTATADAETRAEI
ISRLFDGRDPAIFLRGFDRPNIRLAFQPKDSPRKQVMNFVAARRGQSGIIYCASRARTET
LAQALNEAGHSAVAYHGGMEAEPRRHVEGRFQREDGLIVAATVAFGMGIDKPDIRWVLHA
DLPKSIEAYYQEIGRAGRDGDPAETLTLYGPDDIRFRRMQVDEGLAESARKGADHARLNA
LLGLAEATGCRRRRLLAYFGEDMAEDCGNCDLCLNPPKLFDGTMAVRKALSAMLRTGEWF
GSGHLIDILTGNDTEKVRDRGHDKLPTFGVGREFSRGQWQAIFRQMMGLDLCRPDPERHG
ALHLTDMAHPILRGESSVTLRHDTTLKARGGNVVKTQVSEEDEPLLSALKAKRRALAEAG
GVPAYVIFPDRTLIEMAQRRPATLDEMAHINGVGAKKLERYGDAFLTVIAGEQPEMHPHR
RALAGRPAGVLFDRLLEVQGRLARGEDGTAKPLSCSTSLLRRIAEMRPSDADSLARLMDP
ARLERFGPAFLDEIARS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggacctgctgcgccaggtctggggctttgacggctttcgccccgggcaacgc
gagatcgtcgagaccgtggcaagcgggcaggacgtgcttgcgatcatgccgacgggcggg
ggcaagtcactttgctatcagttgcccgccctgatgcgcgaaggggtgacggtggtcatc
tctccgctgattgcgctgatgcgcgatcaggtgcgcgcattgcgcgaagccggggtttcc
gccggagccctgaccagcggcaacacgcatgacgaaaccgatgccgtctttcagtcgctg
gaacagggggcgctgaagcttctgtacatggcgcccgaacggctggcctcggggggcacc
ctgcagttgctgcgccgcgccggagtcacggccattgccgtggacgaggcgcattgcgtc
agccaatgggggcatgatttccgccccgactatctgcgcatcggcgaattgaagcgcgac
ctgggcgtaccgctgtccgcctttaccgccacagctgatgccgagacgcgggccgagatc
atctcgcgtctgttcgatggtcgcgatccggcgatcttcctgcgcggctttgaccgcccc
aatatccgtctggcctttcagcccaaggacagcccccgcaagcaggtgatgaatttcgtc
gcggcgcgccggggccagtcgggcatcatctattgtgccagccgcgcgcggaccgaaacg
cttgcgcaggcgctcaatgaggccgggcacagcgccgtcgcctatcatggcggcatggag
gccgaaccccggcgtcatgtcgagggccgctttcagcgcgaggacgggttgatcgtggct
gcgacggtggcatttggcatgggcatcgacaagccggatatccgctgggtcctgcatgcc
gatctgcccaagtccatcgaggcctattatcaggagatcggtcgcgcggggcgtgatggt
gatccggccgagacgctgaccctctatggccccgatgatatccgctttcgccgcatgcag
gtggatgaggggctggcggaaagcgcccgaaaaggggccgaccacgcccgcctgaatgcc
ctgctgggtctggccgaggccacgggctgccgccgccgccgtctgctggcatatttcggc
gaggatatggccgaggattgcggcaattgcgatctgtgtctcaacccgccgaaactgttt
gacggaaccatggccgtgcgcaaggcgctgtcggccatgctgcgcacgggtgaatggttc
ggcagcgggcatctgatcgacatattgaccgggaatgacaccgagaaggtgcgcgatcgc
gggcatgacaagctgccgaccttcggggtcgggcgcgaattcagccgtggccaatggcag
gcgatcttccggcagatgatggggctggacctgtgccgccccgatccggaacgccacggc
gccctgcatctgaccgatatggcacatccgatcctgcgcggggaaagcagcgtgacgttg
cgccatgatacgacgctgaaggccaggggcggcaatgtcgtcaagacgcaggtttcggaa
gaggacgaacccttgctgtcggcgctcaaggccaagcggcgcgcgctggccgaggcaggc
ggcgtgcccgcctatgtgatctttcccgaccggacgctgatcgagatggcacagcgccgc
cccgccaccctggacgagatggcgcatataaacggcgtgggcgccaagaagctggaacgc
tatggtgatgccttcctgaccgtcattgccggtgaacaacccgagatgcacccgcacaga
cgcgcgttggccgggcgtccggcgggcgtgctgtttgatcgtttgctggaggttcaaggc
cggttggcgcgtggcgaggatggcactgccaagccgctgagctgttcgacatcgctgctg
aggcgcatcgcggaaatgcgcccttccgacgcggattcgctggcgcgtctgatggacccg
gcgcgtctcgagcgctttggtccggcttttctggatgaaatcgcccgcagctga
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