Paracoccus seriniphilus: JHW44_00655
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Entry
JHW44_00655 CDS
T08801
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psew
Paracoccus seriniphilus
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psew03016
]
JHW44_00655 (truB)
Enzymes [BR:
psew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JHW44_00655 (truB)
Transfer RNA biogenesis [BR:
psew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JHW44_00655 (truB)
Prokaryotic type
JHW44_00655 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WCR14030
LinkDB
All DBs
Position
complement(137623..138516)
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AA seq
297 aa
AA seq
DB search
MARKKGRDITGWLIVDKPAGITSTSVVNKVRWALDARKAGHAGTLDPDATGVLAVALGEA
TKTVATITDAFKCYDFLVTWGAETTTDDASGEVVRQSDSRPLRAQVEAALGEFTGEIMQV
PPQFSAVRVDGARAYDLAREGEELELAARPLWVESLTLLEADEHSARLEMVCGKGGYVRS
IARDLGRKLGCLGHVAHLRRTWSGPFDVEDGVRFEDIDRDRQDWVESQLLPLETALADLP
MLRATPDGARRIRNGNPGEVTGGAEWGELVWVADAAGPVCIGRYQGGMVQPERVFNL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaaaagggtcgcgacatcacgggctggctgatcgtggacaagcctgcgggc
attacctcgacatccgtggtcaacaaggtgcgttgggcgctggacgctaggaaggccggt
cacgccggcacgctggaccccgatgcgaccggggttcttgcggtggcactgggtgaggcg
accaagacggttgcaaccatcaccgatgcattcaaatgctatgatttccttgtcacctgg
ggcgcggagaccacgactgacgatgcctcgggcgaggtggtgcgccagtcggattcccgt
cccttgcgcgcgcaagtcgaggccgcgctgggtgaatttaccggcgagatcatgcaggtt
ccgccacagttttccgccgtcagggtcgatggcgcgcgggcctatgatctggcccgtgag
ggtgaagagcttgaactggcggcccggccgctctgggtcgaaagcctgaccctgcttgag
gccgatgaacacagcgcaaggctggaaatggtctgcggcaagggcggctatgtgcgctcg
atcgcgcgcgatctggggcgcaagctgggctgcctgggccatgtggcacatctgcgcaga
acctggtccggcccctttgacgtcgaggatggtgtcaggttcgaggatatcgaccgcgac
cggcaggattgggtggaaagccagctgttgccgctggagaccgcgctggcagatctgccg
atgctgcgggccacgcccgacggggcgcggcgtatccgcaacggcaaccccggcgaagtg
accggcggcgcggaatggggcgaactggtctgggtcgcggatgccgctggtccggtctgt
atcggccgttaccagggcggcatggttcagcccgagcgcgtcttcaacctgtga
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