Paracoccus seriniphilus: JHW44_00945
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Entry
JHW44_00945 CDS
T08801
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psew
Paracoccus seriniphilus
Pathway
psew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW44_00945 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psew03021
]
JHW44_00945 (rho)
03019 Messenger RNA biogenesis [BR:
psew03019
]
JHW44_00945 (rho)
Transcription machinery [BR:
psew03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JHW44_00945 (rho)
Messenger RNA biogenesis [BR:
psew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JHW44_00945 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_22
OB_RNB
AAA_25
AAA
Fungal_virus_P2_C
ATPase_2
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
WCR14083
LinkDB
All DBs
Position
198968..200239
Genome browser
AA seq
423 aa
AA seq
DB search
MTEERLNLSDLKAKSPADLLAMAEEWEIENASTMRKGEMMFSILKEHAEEGWDIGGEGVL
EVVQDGFGFLRSTEANYLPGPDDIYVSPDMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VERINFESPEKARHKVAFDNLTPLYPNDRLKMEIEDPTIKDRSSRIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIERNHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDAKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKSNAEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgattgaacctgtccgatctcaaggcgaaaagcccggcagatctcttg
gcaatggccgaggaatgggaaatcgagaacgcttccaccatgcgcaagggcgagatgatg
ttctcgatcctcaaggagcatgcggaagagggctgggacatcggcggtgagggcgttctg
gaggtcgttcaggacggattcggcttcctgcggtcgaccgaagccaattatctgcccggt
cccgacgacatttacgtcagccccgacatgatccgccagcacagcctgcgaacgggtgat
acggtggaaggggtgattcgagctcccggcgagaacgaacgttatttcgcgctgaccaag
gttgaacgaatcaactttgaaagccccgaaaaagcgcgccacaaggtggcttttgacaat
ttgacgccgctttatcccaatgatcgcctgaaaatggagatcgaggatcccacgatcaag
gatcgcagctcgcgcatcattgatctggtggctccgatcgggaaaggccagcgatcgctg
atcgtggcgccgccacggacgggtaaaaccgtgctgctgcagaacatcgcccattcgatc
gagcgcaatcacccggaatgctatctgatcgtgctgctgatcgacgaacggcccgaggaa
gtcaccgacatgcagcgcagcgtgcgcggcgaagtgatctcttcgaccttcgatgaaccg
gccagccgccacgtggcggtatcggagatggtcatcgaaaaggccaagcggctcgtggaa
cacaagcgagatgtggtgattcttcttgattcgatcacaagacttggtagggcattcaac
actgtagtgcccagctcgggtaaagtgcttaccggtggtgtggatgcgaatgcgctccag
cggccaaagaggttctttggtgccgcccggaatatcgaagagggcggcagcctgaccatc
atcgccaccgctttgatcgacaccggctcgcgcatggatgaagtcatcttcgaagagttc
aaaggcacgggtaacagcgaaatcgtcctggatcgcaaggtcgccgataaacgcgtcttc
ccggcgatggacatcctgaaatcaggaacgcggaaggaagaactgttggttgatgccaaa
gacctgcagaaaacctatctgttgcgccgaattctgaacccgatgggaacgaccgatgcc
atcgagttcctgatctcaaaactgaaacagacaaagagcaacgccgaattctttgattcg
atgaacgcctga
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