Paracoccus seriniphilus: JHW44_01875
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Entry
JHW44_01875 CDS
T08801
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew00521
Streptomycin biosynthesis
psew00523
Polyketide sugar unit biosynthesis
psew00525
Acarbose and validamycin biosynthesis
psew00541
Biosynthesis of various nucleotide sugars
psew01055
Biosynthesis of vancomycin group antibiotics
psew01100
Metabolic pathways
psew01110
Biosynthesis of secondary metabolites
psew01250
Biosynthesis of nucleotide sugars
Module
psew_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JHW44_01875 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHW44_01875 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JHW44_01875 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JHW44_01875 (rfbB)
00525 Acarbose and validamycin biosynthesis
JHW44_01875 (rfbB)
Enzymes [BR:
psew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JHW44_01875 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
adh_short_C2
Sacchrp_dh_NADP
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
WCR14239
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Position
397525..398562
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AA seq
345 aa
AA seq
DB search
MKILVTGGAGFIGSAVVRLAVRRGHEVVNLDALTYAANLENVASVKDSGLYWFEQADIRD
RAALDRIFDKHAPDAVMHLAAESHVDRSIDGPAAFIETNVIGTFNMLEAARAYWVSQGRP
DSFRFHHISTDEVFGSLGETGQFTETTPYDPRSPYSASKAGSDHLVRAWHETYGLPVVLT
NCSNNYGPYHFPEKLVPVVILRALAGETIPVYGDGGNVRDWLYVEDHADALLLALEKGEN
GRSYNIGGENEARNIDLVRMICDHMDRLNPQGAPHDRLIEFVPDRPGHDRRYAIDPQRIR
TELNWRPSVTVQEGLRLTVEWYLNNRDWWEPLYQRDGVGKRLGTG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggtaacgggcggggccgggttcattggttcggcagtggtgcggcttgcc
gttcggcgcggtcacgaggtggtcaacctggatgcgttgacctatgccgcgaatctggaa
aatgtcgcttcggtcaaggacagcgggctttactggttcgagcaggccgatattcgcgat
cgcgctgcattggaccgtatctttgacaaacacgcccccgatgcggtgatgcatctggcg
gccgaaagccatgttgaccggtccatcgacggacctgcggcctttatcgagacgaatgtg
atcggcacattcaacatgttggaggcggcgcgggcttattgggtttcacaggggcgccct
gattcattccgtttccaccatatctcgaccgatgaggtattcggcagcctcggcgagacc
ggccagttcaccgaaacgaccccctatgatcctcgcagtccctattccgccagcaaggca
ggctctgaccatctggtccgggcctggcatgaaacctatgggttgcccgtcgtgctgacc
aattgttcgaacaattacggtccctatcatttccccgaaaaactggtgcccgtagttatc
ctgcgtgccctggcgggtgaaacgatcccggtctatggcgatggtgggaatgtgcgcgac
tggctgtatgtcgaagaccatgccgatgcgttgctgcttgcgctggaaaagggcgaaaac
gggcgcagctacaatatcggcggcgagaacgaggcccgcaatattgatctggtcagaatg
atctgtgaccatatggatcgcctgaatccgcagggtgctcctcatgaccggctgatcgaa
ttcgtccccgatcgtcccggtcatgaccgtcgctatgccattgatcctcagcgcatccgc
accgagctgaactggcggccttccgtcacggtgcaggaagggctgcgcctgacggtcgag
tggtatctgaacaatcgcgactggtgggaaccactgtatcagcgtgatggtgttggcaag
aggctgggtaccggatga
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