Paracoccus seriniphilus: JHW44_03575
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Entry
JHW44_03575 CDS
T08801
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew03030
DNA replication
psew03430
Mismatch repair
psew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW44_03575 (dnaE)
03430 Mismatch repair
JHW44_03575 (dnaE)
03440 Homologous recombination
JHW44_03575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psew03032
]
JHW44_03575 (dnaE)
03400 DNA repair and recombination proteins [BR:
psew03400
]
JHW44_03575 (dnaE)
Enzymes [BR:
psew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW44_03575 (dnaE)
DNA replication proteins [BR:
psew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHW44_03575 (dnaE)
DNA repair and recombination proteins [BR:
psew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHW44_03575 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
WCR14548
LinkDB
All DBs
Position
727205..730675
Genome browser
AA seq
1156 aa
AA seq
DB search
MATKPLKFIHLRTHSEHSLLEGAIPVGKLPSLAAEAGMPAVALTDSNAMFAALEFSVKAM
DKGVQPIIGCQITLEADATGPVVLLAQNQAGWLNLMSLSSCLYLRSDGSLPHVTLDELCE
RSEGLICLTGGATGPLGLLIAQGQTDKANLLAERLERSFPTRLYVELQRHPGENGKLTEA
EAASEAGLISLAYARELPLVATNDAYFPKPDLYEAHDALICISEKAYIDQSQPRRRLTPQ
HYFKSPEEMAVLFADLPEALENTVEIAKRCAFAVSRHKPILPKFADDEVEELRRQAREGL
EARLKVIPHAVPVEDYHKRLDFELGIIEQMGFPGYFLIVADFIKWAKDHDIPVGPGRGSG
AGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQQKYGKE
KVGQIITFGALLSKAAVRDVGRVLQMPFGQVDRLSKMIPVEGVKPVSIAKARADEPRLRE
AAKEEVVARLLDYAEKIEGLYRNASTHAAGVVIGDRPLDQLVPLYRDPSSDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINGGGRPLHVSASGEELYQPPEGAENQINAIPL
DDKATYDLFASARTVAVFQVESSGMMDALRRMRPTCIEDIVALVALYRPGPMENIPTYCD
VKNGARELESIHPLIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAA
EMAKERPKFIKGSVENGVSEKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDMHLTDKLAVYKRECDRMGIEIVPPCVNRSAPTFTVSQGRIHYALGALK
GVGQDAMRLIHEARGETPFRDINDFARRVDMKRVGKRPLEMLARAGAFDLLDDNRARVLK
SLDGLVAWSAAVHEQAASSQSSLFGGGEDLPPPRPAIAQVWLPAEKLGEEHKAVGFYLSG
HPLDDYLPALKRKKVQTLAEISAEALGGPLVTSIAGTVAARMERKSAKGTQYAFVSLSDP
TGLYEVTVFSDLLNAARELLEPGQNVVLQVKVEPSGDQVKMLANSVTALDDAVADAGAGC
LAVEMQGADTIPRLAEVLGRIKAEINVSSRSRGPVLLRIREGDELIEIEVANDAPLNTPA
RQALRAVPGVLDVIEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaacctcttaagttcatccatcttcgcacacattccgagcattcgcttctg
gaaggcgccattccggtgggcaaattgccgtcgcttgccgccgaagcgggcatgccggct
gtggcgctgaccgacagcaatgccatgttcgcggcgctggagttcagcgtgaaggcgatg
gacaagggggtgcagcccatcatcggttgccagatcacgctggaggccgacgcgaccgga
ccggtggtcctgctggcgcaaaatcaggcgggctggctgaacctgatgtcgctgtcctcc
tgcctctatctgcgtagcgatggcagcctgccccatgtcacgctggatgaactttgcgaa
cgctctgaggggctgatctgtctcaccggcggcgcgacaggcccccttggcctgctgatc
gcgcagggacagaccgacaaggccaatcttctggccgaacgcctggagcgaagctttccg
acccggctctatgtcgaattgcagcgccatcccggtgaaaacggcaagctgaccgaggca
gaagcggcctcggaggcggggctgatatcgctggcctatgcacgtgaattgccgctggtt
gctaccaatgacgcctatttcccgaagccggacctctatgaggcgcatgacgcgctgatc
tgcatttccgaaaaggcctatatcgaccagtcccagccccgtcgccgcctgacgccgcag
cattacttcaaatcgcccgaggaaatggcggtcctgtttgccgatctgcccgaggcattg
gaaaacacggtcgaaatcgccaaacgctgcgcctttgccgtcagccggcacaagccgatc
ctgccgaaattcgccgatgacgaggtcgaggagctgcgccgtcaggcccgcgaagggctt
gaggcacggctgaaggtcattccccatgccgtcccggtcgaggattaccacaagcggctg
gatttcgagctgggcatcatcgaacagatgggctttcccggctatttcctgatcgttgcg
gatttcatcaaatgggccaaggatcacgacatcccggtcgggccggggcggggctcgggt
gcgggctctctggttgcctatgcgctgaccatcaccgaccttgacccgctgcgctacagc
ctgctgttcgaacgctttctgaacccggaacgggtttcgatgccggatttcgacatcgac
ttctgcatggatcgccgcgaagaggtgatccgctatgtgcagcagaaatacggcaaggaa
aaggtcggccagatcatcaccttcggtgcgctgctgtccaaggctgccgtgcgcgatgtc
gggcgggtgctgcagatgccctttggtcaggtcgaccgcctgtcaaagatgattcccgtc
gaaggcgtcaagccggtcagcattgccaaggcccgcgccgacgaaccgcgcctgcgcgag
gccgccaaggaagaggtcgtcgcccgtctgctggattacgccgagaagatcgagggcctg
tatcgcaacgcatccacccatgccgccggtgtggtgatcggtgaccggccgctggatcag
ctggtgccgctgtatcgcgatccgtcctcggatatgcctgccacgcagttcaacatgaaa
tgggtggaacaggccggtctggtcaaattcgactttctggggctgaagaccctgaccgtc
atccagaacgctgtcgatctgatcaatggtggcggtcggccgctgcatgtctcggccagc
ggcgaagagctgtatcagccccccgaaggggccgagaaccagatcaacgccatcccgctg
gatgacaaggccacttatgatcttttcgccagcgcccgcaccgtggcggtgttccaggtg
gagagctcgggcatgatggacgcgctgcggcgcatgcgtcccacctgtatcgaggatatc
gtcgcgcttgtggcgctgtatcgtcccggcccgatggagaatattccgacctattgcgac
gtgaagaacggcgcgcgcgagttggaatccatccacccgttgatcgaccatatccttgag
gaaacccagggcatcatcgtctatcaggaacaggtgatgcagattgcccaggtcatggcg
ggctactctctgggcggcgctgacctgctgcgccgcgccatgggcaagaagatcgccgcc
gagatggccaaggagcggcccaaattcatcaagggcagcgtcgagaatggcgtttccgaa
aagaaggccggcgaggtttttgacctgctggagaaattcgccaattacggcttcaacaaa
tcccacgcagcggcctatgcggtggtcagctatcagaccgcatggctgaaggcgaaccac
ccggtcgaattcatggcggcggtcatgaattgcgacatgcatctgaccgacaagctggcc
gtctacaaacgcgaatgcgaccgcatgggaatcgagatcgtgcctccctgcgtcaaccgc
tcggctccgacctttaccgtcagccaggggcgtatccactatgcgctgggggcgctgaag
ggggtcgggcaggacgccatgcgcctgatccacgaagcaaggggcgaaactccgttccgc
gacatcaatgatttcgcgcgccgcgtcgacatgaagcgcgtgggcaagcggccgctggaa
atgctggcgcgggcgggggcctttgacctgctggatgacaatcgtgcaagggtgctgaaa
tcgctggacgggctggtggcatggtcggcggcggtgcatgaacaggcggcctcaagtcag
tcatcgctgtttggcgggggcgaggatctgccgccaccgcgccccgccatcgcacaggtc
tggctgcccgccgaaaagctgggcgaggaacacaaggccgtcggcttctacctgtcgggc
catccgctggatgactatctgccggcgctgaaacgcaagaaggtgcaaacccttgccgag
atcagcgccgaggctctgggcgggccgctggtgacatcgattgccggaacggtcgcggcg
cggatggagcgcaaatcggccaagggtacccaatatgcctttgtcagcctgtccgatccg
accgggctgtatgaggtgacggtattctcggatctgctgaacgcggcccgcgaacttctg
gagccgggccagaatgtcgtgctgcaggtcaaggtcgaaccctcgggcgatcaggtcaag
atgctggccaattcggtgaccgcactggatgacgcggtggccgatgccggggcaggctgt
ctggcggtagagatgcagggcgccgatacgatcccccgtctggccgaagtgctgggccgc
atcaaggccgagatcaatgtgtcctcacgttcgcgcgggccggttctgctgcgcatccgc
gaaggcgacgaattgatcgagatcgaggtcgccaatgacgcgccgctgaacacgcctgcg
cgtcaggcgctgcgggcggtgccaggggttctggatgtgatcgaggaatag
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