Paracoccus seriniphilus: JHW44_03705
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Entry
JHW44_03705 CDS
T08801
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psew
Paracoccus seriniphilus
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psew03032
]
JHW44_03705 (topA)
03400 DNA repair and recombination proteins [BR:
psew03400
]
JHW44_03705 (topA)
Enzymes [BR:
psew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JHW44_03705 (topA)
DNA replication proteins [BR:
psew03032
]
Prokaryotic type
DNA Topoisomerases
JHW44_03705 (topA)
DNA repair and recombination proteins [BR:
psew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHW44_03705 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Pico_P1A
Motif
Other DBs
NCBI-ProteinID:
WCR14573
LinkDB
All DBs
Position
complement(753825..756551)
Genome browser
AA seq
908 aa
AA seq
DB search
MPVVVVESPAKAKTIEKYLGADYRVLASFGHVRDLPPKDGSVDPEHDFDMKWEVASDSRK
HLKAIKDALKEDPNLILATDPDREGEAISWHLLETLRSSLKKDSEVNRVTFNAITKAAVT
EAMQQPREIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVDRE
MEIEAFKPREYWSVHARLATPAGAEYDAQLVSLAGTKLDRFDLGDAEKAAMAVSAVASRD
LSVTSVAAKPASRNPWPPFMTSTLQQEASRKMGMGAKACMSAAQRLYEAGLITYMRTDGI
DMAPEAVMAARDAIKSKFGEKYLPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDKLKVTS
DEQRKLYDLIWKRTIASQMEAARMERTTVEIGSEDGQVGLRATGQVMLFDGFLRVYDQGR
DDDEGEDSARLPAITQGEAATLVASAFESEFAKAREKGEDVPQAPAGQRAAPGLLMDEAA
SAAARQHFTQPPPRFTEATLVKRMEELGIGRPSTYASIVTTIQDRAYVRKDKNRLIPEDK
GRLVTIFLVKYFPRYVSHDFTANLENELDEISAGELMWREVLGRFWKDFSKALEGTSELR
ITEVLDAIDDVLAPHLYPPRADGGDPRECPLCGKGRLNLKTARSGGAFIGCSNYPECRYT
RPLSAPDGEAPVGDRVLGQDNGDEISLKTGRFGPYVQRGEATAEQPKPPRASIPKGWDAA
TLDLEQALQLLSLPRPIGPHPDDGVMIEAGIGRYGPYVKHDRKYANLPDVDEVFTIGMNR
AVEVLAAKQTRGRTAAAPLKELGDHPDGGAIQVMNGRYGPYVKWEKINATLPNDVTPEDI
TMEQALELIAAKAAKSPKKAAKKPAAKKKPAAKATAKKAAPKKAATRKPAAKKAPPADDG
DESAPDQS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatctccggccaaggccaaaaccatcgaaaaatatctcggt
gccgactaccgtgtgctggccagtttcggccatgtccgcgacctgccccccaaggatggc
agcgtcgatcccgaacatgatttcgacatgaaatgggaagtggccagcgacagccgcaag
catctgaaggcgatcaaggacgcactgaaggaagacccgaacctgattctggccaccgac
cccgaccgcgagggcgaagccatcagctggcaccttctggaaacgctgcgcagctcgttg
aaaaaggacagcgaggtcaaccgcgtcaccttcaacgccatcaccaaggctgccgtgacc
gaggcgatgcagcagccgcgcgaaatcgatcaggcgctggtcgatgcctatctggcgcgg
cgtgccctggattacctggtcggcttcaatctctcgccggtgctgtggcgcaagctgccc
ggcgcgaaatcggccggacgggtgcaatcggtctgcctgcggctgatcgtcgatcgcgaa
atggaaatcgaggccttcaagccgcgcgaatactggtcggtccacgcccggctggcgacg
cctgcgggggccgaatatgacgcccagctggtctctctggccgggaccaagctggatcgt
ttcgacctgggcgatgccgaaaaggccgccatggcggtcagcgctgttgccagccgcgac
ctttccgtgacctcggtcgcggcgaaaccggccagccgcaatccttggccgcccttcatg
acatcgaccctgcaacaggaagcatcgcgcaagatgggcatgggggccaaggcctgcatg
tcggccgcgcaacgcctctatgaagccgggctgatcacctatatgcggaccgatggcatc
gacatggcccccgaggccgtgatggccgcccgtgatgccatcaagtcgaaattcggcgag
aaatacctgccgaaaagcccgcgcatgtacaagaacaaggccaagaacgcgcaggaagcc
cacgaatgcatccgtccgaccgacatgatgctgtcacccgacaagctgaaggtcacctcc
gacgaacagcgcaagctgtatgacctgatctggaaacgcaccatcgccagccagatggaa
gcggcccggatggagcgcacgactgtcgagatcggcagcgaagacggtcaggtcggcctg
cgcgccaccggtcaggtgatgttgtttgacgggttcctgcgggtctatgatcagggccgc
gatgatgacgagggcgaagacagcgcccgcttgcccgccatcacccagggcgaagccgcg
accctcgtggcctcggccttcgaaagcgaattcgccaaggcccgtgaaaagggcgaagac
gtacctcaggcgcccgccggacagcgggcagcaccgggattgctgatggatgaggccgcc
tcggccgccgcccgtcagcatttcacccagcccccgccccgctttaccgaggcaacgctg
gtcaagcgcatggaggaactgggcatcggtcgtccttcgacctatgccagcatcgtgaca
acgattcaggatcgcgcctatgtccgcaaggacaagaaccgcctgatccccgaggacaag
ggccgtctggtcacgatcttcctggtcaaatatttcccgcgctatgtcagccatgacttc
acggccaatctggaaaacgaactggatgagatcagcgccggcgaattgatgtggcgcgag
gttctgggccgtttctggaaagatttttcaaaggcgctggaaggcacatcggaactgcgc
atcaccgaggttctggacgcaatcgacgacgttctggcgccgcatctctatccgccccgt
gcggatggcggcgatccgcgtgaatgcccgctgtgcggcaagggtcggctgaacctgaaa
accgcgcgttctggcggtgccttcatcggctgctcgaattaccccgaatgccgctatacg
cgccccctgtcggcccccgatggcgaagccccggtcggcgaccgcgtcctgggtcaggac
aatggcgatgaaatcagcctcaagaccggacgcttcggcccctatgtgcagcgtggcgag
gccacggcggaacagcccaagccgccgcgcgcctcgatcccaaagggatgggatgcggcg
actctggatctggagcaggcgctgcaactgttgtccctgcctcggcccattggcccccac
cccgatgacggcgtcatgatcgaggccggaatcgggcgctatggcccctatgtgaaacat
gaccgcaaatatgcgaatctgcccgatgtcgacgaggtcttcaccatcggcatgaatcgc
gcggtcgaggttctggccgcaaaacagacccgtggcagaacggctgccgctccgttgaag
gaactgggcgatcatcccgatggcggcgcaatccaggtgatgaatggccgctatggtccc
tatgtgaaatgggaaaaaatcaacgcgaccctgcccaacgatgtcacgcccgaggacatc
accatggaacaggcgctggaactgatcgcggccaaggccgcgaagtcccccaagaaggct
gccaagaagcccgccgcgaagaagaaacccgcggcaaaggcaacagccaagaaggccgct
cccaagaaggcggcgaccagaaaaccggctgcgaaaaaggcaccccctgccgacgatggg
gacgagtccgcaccggatcaaagttag
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