Paracoccus seriniphilus: JHW44_08325
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Entry
JHW44_08325 CDS
T08801
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psew
Paracoccus seriniphilus
Pathway
psew00550
Peptidoglycan biosynthesis
psew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JHW44_08325 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psew01002
]
JHW44_08325 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psew01011
]
JHW44_08325 (dacB)
Enzymes [BR:
psew01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JHW44_08325 (dacB)
Peptidases and inhibitors [BR:
psew01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
JHW44_08325 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psew01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JHW44_08325 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
WCR12962
LinkDB
All DBs
Position
complement(1708348..1709757)
Genome browser
AA seq
469 aa
AA seq
DB search
MRTLGRRSLLAGLLALPASRVLAQDETLFSRPPVRPVPSTSRLIARAGAAATVGYALIDR
KTGGVMDAGGADLPLPPASTMKALTALYALDRLGGDFRFRTRILRAGDTLILAGGGDPVL
NTDDLAALADNLVAVGQASPARFVVWGGALPSIEEIAPAQADYLAYNPALSGMILNFNRV
HLGWRPGADGVQMSLQARAARHSPRAYTISAQARSQARLFDYHKDDRQEFWTVSRAAVAR
AGSRWLPVRNPELYAGDVFQTLCRAKGLVLPRPEVISQLPAATEVVAHESPQLRELLRDM
LKFSTNLTAEVIGLRASGAAGQEASAGAMQGWLQEQGLGQDFLLRDHSGLSTQSRVTALG
LARAVSLAKGAEELAGLLKVNPLDEDLGVNEQRDFTVSGKTGTLNFVSNLTGHLETTDGK
AASFAILCTDAPRQLASVGQEMPAGVITWTLRAKQLQRDMLTGWAARFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaggacactggggcgccgatctctcctggcgggtcttcttgcgcttccggcttcgcgg
gttctggcgcaggatgagacgctgttttcgcgcccgccggtccggccggtgccttcgaca
tcccgactgatcgcccgcgcgggggcggcggcaacggttggctatgcgttgatcgaccgc
aagaccggcggggtgatggacgccggaggtgcagatctgccgctgccacccgccagcacg
atgaaggccctgacagcactttatgcgctggatcgcctgggcggagacttccgttttcgc
acccgcatcctgcgtgccggagacacgctgattctggcgggcggtggtgacccggttttg
aacacagatgatctggccgcgcttgccgacaatcttgtggccgtcggacaggcctcgccc
gcgcgttttgtcgtctggggcggtgccttgccgtcaatcgaggagatcgcgccggcgcag
gccgattatctggcctataatccggcactgtccggcatgatcctgaatttcaaccgtgtc
catctgggctggcggcccggggcagatggcgtgcagatgtcgctgcaggcccgtgcagcc
cggcattctccacgcgcctatacgatttccgcgcaggcccgcagtcaggcaaggcttttc
gactatcacaaggacgacaggcaggaattctggacggtgtcgcgggcagcggtcgcgcgt
gccggaagccgctggttgccggtgcgcaaccccgagctttatgccggcgatgtctttcag
accctgtgccgagccaaggggctggtgctgccccgccccgaggtgatctcgcagctgcct
gccgcgaccgaggtggtcgcccatgaaagcccgcaattgcgcgaattgttgcgagacatg
ctgaagttctcgaccaatctgacggccgaagtcatcggcttgcgggccagcggcgcggct
ggtcaggaggcatccgccggtgcgatgcagggctggttgcaggagcaggggctggggcag
gattttctgctgcgagatcattccggcctgtcaacgcaaagccgggtgacggcccttggg
ctggcgcgggcggtgtctttggcgaagggggccgaagaactggcaggcttgctgaaggtc
aatcccctggacgaggatctcggggtgaatgagcagcgcgatttcactgtctcgggcaag
accggcacattgaatttcgtgtccaatctgaccggccatctggaaacgacggatggcaaa
gcggcaagcttcgccatcctttgcacggatgccccgcgccaattggcctcggtggggcag
gaaatgcctgcgggggtcatcacctggacgctccgcgccaagcaattgcagcgcgacatg
ctgacaggctgggcagcgcggttcctctag
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