Paracoccus seriniphilus: JHW44_08955
Help
Entry
JHW44_08955 CDS
T08801
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew00300
Lysine biosynthesis
psew00470
D-Amino acid metabolism
psew01100
Metabolic pathways
psew01110
Biosynthesis of secondary metabolites
psew01120
Microbial metabolism in diverse environments
psew01230
Biosynthesis of amino acids
Module
psew_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JHW44_08955
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JHW44_08955
Enzymes [BR:
psew01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JHW44_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Rsa3
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WCR13076
LinkDB
All DBs
Position
1835777..1837027
Genome browser
AA seq
416 aa
AA seq
DB search
MNRPESDIDPILTQAADRFGTPAYVYSTDLIDARITALERSLGRWFKLSYAMKCNPNPEL
LSWLHKRIPCIDVSSGGELMLALGAGWRADQASFTGPAKREVELRHAIEAGLGELVVESL
REARLANRIAGESGKIQNVVIRIAPDRVPKGFGDQMAGRPSPFGIDIEEAPAALTEIAAL
PHLRIAGLHIYSGTQCLKPAALVENWGIFISIFRELCEHHDLHPDRLIFGAGLGIPYHPG
DQALDLDEIAEAIAPELDALRSDPRFSDTDLVLELGRYLVGPAGYFVTRVTSIKESRGTR
IAICDGGMNGHLAASGNFGMVLRRNYVIHRVGGGAGEEPIDITGPLCTSIDKLGAKVALP
RIEEGDLIAIHASGAYGPTSSPVNFISHPAPREIIAQGGQLTDATRIESCGLRDPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaggcctgaatccgatatcgaccccattctgacgcaggccgccgaccggttcgga
acgcccgcctatgtctattccaccgatctgatcgatgcgcggatcacggcgctggaacgc
agtctgggccgctggttcaagctgtcctatgcgatgaagtgcaatccgaaccccgaattg
ctgtcctggttgcacaagcgcattccctgtatcgacgtctcctcgggcggagagctgatg
ctcgcgcttggcgcgggatggcgggcagatcaggcgagtttcaccggccccgccaagcgc
gaggtcgagttgcgccatgccatcgaggcagggctgggcgaactggtggtcgaatcgctg
cgcgaggcgcggctggcgaatcgcatcgccggtgaaagcggcaagatccagaatgtcgtc
atccgcatagccccggaccgtgtgcccaagggctttggcgaccagatggccgggcgaccc
agcccctttggcatcgacatcgaggaagctccggcggccctgaccgagatcgccgccctg
ccccatctgcgcatcgcgggtctgcatatctattccggcacgcaatgcctgaagcccgcc
gcacttgtcgagaactgggggatcttcatctcgatctttcgcgagctgtgcgaacaccat
gacctgcatcccgaccggctgatctttggagccgggttgggcatcccttatcaccccggc
gaccaggctctggatctggatgagatcgccgaggccatcgcgcccgaactggacgcgctg
cgcagcgatccgcgcttttcggacaccgatctggtgctggaactgggccgctatcttgtc
ggcccggcaggctatttcgtgacccgtgtcacctcgataaaggaatcgcggggcacccgc
atcgcgatctgcgatggcggcatgaacggccatctggcggcctcggggaatttcggcatg
gtgttgcgacgcaattacgtgatccatcgcgtcggtggcggagcgggcgaggaaccgatc
gacatcaccggcccgctctgcacctcgattgacaagctgggggccaaggtcgccctgccc
cgcatcgaggaaggggatctgattgccattcacgccagcggcgcctatggtccgacctcc
agcccggtgaatttcatcagccatcccgccccgcgcgagatcattgcccagggcggccag
ttgaccgatgccacacgcatcgaaagctgcggcctgcgcgacccgtcctga
DBGET
integrated database retrieval system