Paracoccus seriniphilus: JHW44_11920
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Entry
JHW44_11920 CDS
T08801
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew03030
DNA replication
psew03410
Base excision repair
psew03420
Nucleotide excision repair
psew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW44_11920 (polA)
03410 Base excision repair
JHW44_11920 (polA)
03420 Nucleotide excision repair
JHW44_11920 (polA)
03440 Homologous recombination
JHW44_11920 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psew03032
]
JHW44_11920 (polA)
03400 DNA repair and recombination proteins [BR:
psew03400
]
JHW44_11920 (polA)
Enzymes [BR:
psew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW44_11920 (polA)
DNA replication proteins [BR:
psew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JHW44_11920 (polA)
DNA repair and recombination proteins [BR:
psew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JHW44_11920 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHW44_11920 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WCR13613
LinkDB
All DBs
Position
complement(2445180..2447990)
Genome browser
AA seq
936 aa
AA seq
DB search
MTSDAPAFGKGCHLHLIDGSAFIFRAYHALPALTRKSDGLPVGAVAGFCNMLWKYVTDEH
GSNAPTHAAVIFDHSSKTFRNEIYDLYKANRPAPPEDLRPQFPLTREATRAFNISCIELE
GYEADDIIAALACRAREAGGSATIISSDKDLMQLVGDGVDMLDPIKGKMIGVDEVQAKFG
VGPEKVVDVQALAGDSVDNVPGAPGIGIKTAAQLINEYGDLETLLARAGEIKQPKRRQTL
IDHAEQIRISKQLVQLDCATPLDFTLQSLEVRDPDAEALLGFLTEMEFSTLTKRVAGKLG
AEAPVISAAPANSAAPAAPETPGFDPAGYECVTDMDALQGWLADIRDAGHVAIDTETTSL
DEMQADLVGLSLCVRAGRACYIPVGHVEGGDDLFGAAALVAGQLAKDEVLAALKPILEDP
AILKIGQNIKYDWKILARSGIRMTPVADTMLMSYALNAGTHNHGMDELAERYLDHKCIPI
KELIGSGKSQIGFGQVAIDKATPYAAEDADVTLRLWQHFAPLLPVEKVTTVYETLERPMV
PVLADMEMAGIRVDGDTLKRMSNAFAQKMAQLEDEIHELAGERFNVGSPKQLGEILFDKM
GLAGGKQGKTGAYSTSADVLEDLAAEGTDLAARVLDWRQISKLKSTYTDALQTYVNPETG
RVHTSYSIAGAQTGRLASSDPNLQNIPVRSDEGRRIREAFVATEGHRLVSLDYSQIELRI
LAHVADIPALKQAFREGVDIHAMTASQMFGVPVEGMDPMIRRQAKAINFGVIYGISGFGL
SRNLRIPRAEAQEFINTYFERFPEIRAYMDKTVADAKQDGFVKTLFGRRINTPAINQSGP
AAGGARRAAINAPIQGAAADIIRRAMIRMPAAIRDLPATMLLQVHDELIFEVEENAVDDL
IAVARQVMESAAEPVAKLTVPLVVDAGSGMNWAEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggacgcgcctgccttcggcaagggttgccatctgcatctgatcgatggctcg
gcctttattttccgtgcctatcacgcgctgcctgcattgacgcgcaaatccgatggcttg
cccgttggcgctgtcgccggtttctgcaacatgctgtggaaatatgtgacggatgaacat
ggcagcaatgcacccacgcatgcggcggtgatctttgaccattcctccaagacctttcgc
aacgagatctatgacctctacaaggccaatcgtcccgcgccgcccgaggatctgcggccg
cagtttccgctgacccgcgaggctacccgcgccttcaatatctcttgtatcgagctggag
ggctatgaggccgatgacatcatcgcggcgctggcctgccgggcgcgggaagccggcggg
tcggccaccatcatcagcagcgacaaggacctgatgcagttggtgggcgatggggtcgac
atgctggacccgatcaagggcaagatgatcggtgttgacgaggttcaggcgaaattcggc
gtcggccccgagaaggtcgtggatgtgcaggcactggccggtgattcggtcgacaatgtg
cccggcgcaccggggatcggcatcaagaccgccgcgcagctgatcaatgaatatggcgac
ctcgagacactgcttgcccgcgcgggcgagatcaagcagcccaagcggcgccagaccctg
atcgaccatgccgagcagatccgcatttcgaagcaactggtgcagctggattgtgccacg
ccactggacttcacgctgcaaagcctggaggtgcgcgaccccgatgccgaggccctgctg
ggcttcctgaccgaaatggaattcagcaccctgaccaagcgcgtggccggtaaactgggt
gccgaggctccggtgatcagcgccgcgccggccaactctgccgccccagcggcgcccgag
acgcccggtttcgatcccgctggctatgaatgtgtcaccgatatggatgcgctgcagggc
tggcttgccgatatccgcgatgccgggcatgtcgccatcgacacggaaaccacctcgctg
gatgaaatgcaggcggatctggtcggtctgtcgctttgcgtccgcgcggggcgggcctgc
tatatccctgtcggccatgtcgagggcggagacgatctgttcggggccgcggcgctggtg
gcgggtcagcttgccaaggacgaggttctggccgcgctgaagccgattctggaagatccg
gcgattctgaagatcggccagaacatcaaatatgactggaagatcctggcgcgttcgggg
attcgcatgacaccggtcgccgataccatgctgatgtcctatgcgctgaatgcaggcacc
cataaccacggtatggacgaactggccgagcgctatctggaccacaagtgcattccgatc
aaggaactgatcggctcggggaaatcgcagatcggctttggtcaggtcgccatcgacaag
gccacgccttacgccgccgaggatgccgatgtcaccctgcgactgtggcagcattttgct
ccgctcttgccggtagagaaggtgacgacggtctatgagacgctggagcggccgatggtg
ccggttctggcggatatggaaatggccgggattcgcgtggatggcgatacgctgaagcgg
atgtccaatgccttcgcccagaagatggcgcagcttgaggacgagattcacgagcttgcg
ggcgaacggttcaatgtcgggtcgcccaagcaattgggcgaaatcctgtttgacaagatg
gggctggccggtggcaagcagggcaagaccggcgcctattccaccagtgccgatgtgctg
gaggatctggctgccgagggcaccgatctggcggcgcgggtgctggactggcgccagatc
agcaagctgaaatcgacctataccgatgcgttgcagacctatgtgaatccggaaacgggc
agggtgcataccagctattccatcgcaggggcgcagacagggcggctggcctccagcgat
ccgaacttgcagaacatcccggtgcgcagtgatgaaggcaggcgcatccgcgaggcattc
gtggccaccgaggggcatcgtctggtcagcctggactatagccagatcgaactgcgcatc
ctggcccatgtcgccgatatcccggcgttgaagcaggcgttcagggaaggtgtggatatt
cacgccatgaccgccagccagatgttcggcgtgccggtcgagggcatggacccgatgatt
cgacgtcaggccaaggcgatcaatttcggcgtcatctacgggatttcgggctttggtctg
tcgcgcaatctgcgcattccccgcgccgaggcgcaggagttcatcaacacctatttcgaa
cgtttccccgagattcgcgcctatatggacaagacggtggccgacgccaagcaggacggt
tttgtcaaaaccctgttcgggcggcggatcaacaccccggcgatcaaccagtccggcccg
gcggcgggcggggcgcgtcgcgcggcaatcaatgcgccgattcagggcgcggcggccgat
atcatccggcgtgcgatgatccgtatgcccgcagcgattcgcgatctgcccgcgaccatg
ctgttgcaggtgcatgacgaattgatcttcgaggtggaagagaatgccgtggacgacctg
atcgccgtggcgcgacaggtcatggaatcggctgccgagccggtggccaagctgacggtg
cccctggtcgtcgatgcgggcagcggcatgaactgggccgaggcacattag
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