Paracoccus seriniphilus: JHW44_12555
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Entry
JHW44_12555 CDS
T08801
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psew
Paracoccus seriniphilus
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psew03009
]
JHW44_12555 (rimO)
Enzymes [BR:
psew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JHW44_12555 (rimO)
Ribosome biogenesis [BR:
psew03009
]
Prokaryotic type
ribosomal protein modification factors
JHW44_12555 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WCR13729
LinkDB
All DBs
Position
complement(2563225..2564589)
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AA seq
454 aa
AA seq
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MQTNPPDLRPDLARARIPQERRDGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPEY
QGADAVIVNTCGFLDSAKAESLEAIGEALQENGRVIVTGCLGAEPEYITGTHPKVLAVTG
PHQYEDVLDAVHGAVPPRPDPYIDLLPASGVSLTPRHYSYLKISEGCNHKCKFCIIPDMR
GKLVSRPAHAIMREAEKLVEAGVRELLVISQDTSAYGVDRKFAEERGHRAHITDLARDLG
SLGAWLRLHYVYPYPHVRDLIPLMAEGLVLPYLDIPFQHAHPDTLRRMARPAAAARTLDE
IAAWRSICPEITLRSTFIVGYPGETEQEFQTLLDWLDEAQLDRVGAFQYENVAGARANDL
PDHVPDEIKQERFERFMQKAQAISEAKLADKVGTVVEVIVDAVDDEGATCRTKADAPEID
GNLFIDEGFESLKPGDIVSVTVDEAGEYDLWGRL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgaacccgcccgatctgcgccccgacctcgcccgcgcccgcatcccccaggag
cggcgcgatggacagccgaccatcggcatggtcagccttggctgccccaaggcgctggtg
gatagcgaacgcatcctgacgcgcctgcgcgccgagggctatgccatcagccccgaatat
cagggtgcggatgcggtgatcgtgaacacctgcggttttctggacagcgccaaggcggaa
agccttgaagccattggtgaggcgctgcaggaaaacgggcgggtgatcgtgaccggctgc
ctgggtgccgaacccgaatatatcaccggcacgcaccccaaggtgctggcggtgaccggc
ccccatcaatatgaggatgtgctggatgccgtgcatggcgcggtgccgccccgtcccgat
ccctatatcgatctgctgccggcctcgggtgtcagcctgactccgcgccattacagctat
ctgaagatttcagagggctgtaaccacaaatgcaaattctgcatcatccccgacatgcgc
ggcaagctggtcagccgcccggcccatgccatcatgcgtgaggccgaaaagctggtcgag
gccggggtcagggagttgctggtcatcagccaggatacctcggcctatggcgtggaccgc
aagtttgccgaggagcgcggtcatcgagcccatatcaccgatctcgcccgtgatctgggc
agcctgggtgcctggctgcggctgcactatgtctatccctatccgcatgtgcgcgacctc
atcccgctgatggccgaggggctggttctgccctatctggacatccccttccagcatgcc
catccggatacgctcaggcgcatggcgcgtccggccgcggcggccaggactctggatgaa
atcgccgcttggcgcagcatttgccccgagatcaccctgcgctcgacctttatcgtcggc
tatccgggcgaaaccgaacaggagttccagaccctgctggactggctggacgaggcgcag
ctggatcgtgtcggggcgttccaatatgagaacgtggccggggcacgagccaatgatctg
cccgaccacgtccccgatgaaatcaagcaggaacgcttcgaacgcttcatgcagaaggct
caggcgatcagcgaggcgaaactggccgacaaggtcggaacggtggtcgaggtcatcgtg
gatgccgtcgatgatgaaggcgcgacctgccgcaccaaggccgatgcccccgaaatcgat
ggcaatctgttcatcgatgagggcttcgaatcactcaagcccggcgatatcgtcagcgtg
acagtggatgaggcaggcgaatatgatctgtggggacggctatga
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