KEGG   Polypterus senegalus (gray bichir): 120514259
Entry
120514259         CDS       T08668                                 
Symbol
kdm4aa
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120514259 (kdm4aa)
Enzymes [BR:psex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120514259 (kdm4aa)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120514259 (kdm4aa)
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120514259 (kdm4aa)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 JmjN PHD_2 zf-HC5HC2H PHD Tudor_5 PHD_5 DUF7141 Rad9_Rad53_bind LBR_tudor DUF4537 53-BP1_Tudor SLX1_C PTM_DIR17_Tudor
Other DBs
NCBI-GeneID: 120514259
NCBI-ProteinID: XP_039590474
LinkDB
Position
14:70557125..70647370
AA seq 1074 aa
MASDSGSQNSSCRIMTFYPTKEEFQNFIRYMAYIESQGAHKAGLAKIVPPKDWKPRKCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKIANSDKYCNPRYDDFEELERK
YWKNLTFNPPIYGADVNGTLYDPDINEWNIGHLNTILDTVEKESGITIEGVNTPYLYFGM
WKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRH
KMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAILCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNPVIDHSLPTPEAAEFMKEDLGN
DEHLNSITSCTEESKETDTGKKSVSKHRIGTKRHRVCLEVPQELLPKEEFGSLQCEPAVP
KEMDIILSHQDNPTEVDCDEDNCIKDSCKTENIQEEDIVKLKNENSVQNIDTKELIVPSE
VSEYHFPLGDTPKECDTTMPIFTEGMLTLLSEKCKKMSENNTPFLQNLSTEETPDMTPKP
SLSINITSISTDSIIGQSYTKEECEESGEDNIAKSKESSILTSVHTPDMEEIDEEDTCSV
TENKIIKSKRQPLSKLPRHHPLIKDCFSDEEMQEQVILEEDISDSEPWTKSLANLWQTRP
HNLQAEREYNENMGLQSPYCAVCMIFQTFQQLECKSNCQSHKKDSEGGLRTKPLIPEMCF
ASNEDSSEFNFSAPYLEEDGTSLLISCSNCLVRVHTSCYGVTPEKIFKNWICARCEANAM
TEGCCLCSLRGGALQRANNDKWVHVLCAVAVLEARFVNIADRSPVDLSGIPLQRFKLKCY
YCKKRVKRTAGCCVQCSHGRCPTSFHATCAQAAGVLMQPDDWPFVVFITCYRHKGSITTQ
RNKAIMQELSVGQKVICKHKNGRYYQCEVVKLTKETFYEVNFDDGSFSDNLFPEDIVSRD
CVHLGPPEEGEVVQVRWTDGLVYGAKFVAAHVIQMYQVEFEDGSQLSVKRDDVYTLEEEL
PKRVKTRLSFASDMRFDGIFADKEFKQETKRQRVINSRYRGDYIEPVVYRAIME
NT seq 3225 nt   +upstreamnt  +downstreamnt
atggcgtctgactcaggatcccagaattccagttgccggataatgacattttacccaact
aaggaggagttccaaaatttcatccgttacatggcctatatagaatcacagggtgcccat
aaagctggcctggctaagattgtcccccctaaggattggaaaccaagaaaatgttatgat
gatattgatgagttggtcattccagctccaattcagcaggttgttacaggacaatctggt
ctttttacacagtataacattcaaaagaagccaatgacagtaagagaatttcgaaagatt
gcaaacagtgacaaatattgcaatccacggtatgatgattttgaagagcttgaacgtaaa
tactggaaaaaccttactttcaaccctccaatatatggtgctgatgtaaatgggacactg
tatgatccagacatcaatgaatggaacattggacatttaaatacaattctagatacggtg
gaaaaagagagtggaattactattgaaggcgtcaacacaccatatctttactttggcatg
tggaagacaacgtttgcttggcatactgaagacatggacctttacagtataaattatttg
cactttggagagcctaagtcatggtacactgttcctccagaacatggtaaaagattagaa
cgtctggctaaaggttttttccccggaagctcacaaaactgcgaagcttttctgaggcac
aaaatgacacttatctcaccatctattttaaagaagtatggaattccttttgataagatc
actcaggaggctggagaatttatgatcacatttccttacggttatcatgctggttttaac
catggcttcaattgtgcagaatcaaccaattttgcaactagacgatggattgaatatgga
aaacaggcaatcctgtgctcctgtcgtaaggatatggtgaaaatttctatggacgtattt
gtaaggaaattccaacctgagcgctacaagctatggaaagctggaaaagacaatcctgtc
attgatcactcactacccaccccagaagcagccgagtttatgaaagaggatttaggtaac
gatgaacatctgaattccattacaagctgtacagaggaatcaaaagaaacagatactggt
aaaaagagtgtttccaagcacagaattgggacaaaaagacatagagtgtgtttagaagtc
cctcaggagttactgcccaaagaagaatttggatcactacagtgtgaaccagctgtaccc
aaagagatggatataatattaagtcatcaggacaatcccacagaagtggactgtgatgaa
gataattgcataaaagactcttgtaaaaccgaaaacatacaagaggaggatatagtaaag
ctgaagaatgagaacagtgtccaaaacattgacactaaagaactgattgttccctccgaa
gtttcagagtaccattttccacttggtgacacccccaaagaatgtgatactacaatgccc
atctttactgaaggaatgttgacactcctatcagaaaaatgcaagaaaatgtcagaaaat
aacactccctttcttcagaacctatcgactgaagagactcctgatatgacacctaagcct
tctctttctataaatattacctcaatttcaactgactccataattggccaaagttatacc
aaggaggaatgtgaagaatctggtgaagacaacatagctaaaagtaaggagtccagtatt
ttaaccagtgtccatactccagacatggaagagattgatgaagaagacacctgttctgta
actgagaataagattattaaaagcaaacgtcagcccttgagtaaactgccgcggcatcac
cccctaatcaaagactgctttagcgatgaagaaatgcaagagcaagtaattttggaggag
gatatcagtgattctgaaccttggacaaaatctcttgctaatctttggcagacacgccct
cacaatttacaagcagagcgggagtataatgaaaatatgggcttacaatccccatactgt
gctgtgtgcatgattttccaaacttttcaacagcttgaatgcaaaagcaattgtcaaagc
cacaagaaagactcagagggaggactaagaacaaaaccacttatacctgaaatgtgcttt
gccagtaatgaggatagcagtgagtttaatttctctgcaccataccttgaggaagatgga
accagcctgttgattagctgttcaaattgtttagtacgggttcatacaagttgttatggt
gttactcctgaaaaaatctttaagaactggatatgtgcccggtgtgaagcaaatgctatg
acagagggctgctgcttgtgttccttgaggggaggagccttgcagcgagcaaacaatgac
aagtgggtgcacgtcctctgtgcagttgcagttttggaagctcgatttgtgaatattgct
gacagaagtcctgtggatctcagtggaataccattgcagaggttcaaactgaaatgttac
tactgcaaaaagcgtgtgaagagaactgcaggatgctgtgtacagtgttcacatggtcgc
tgcccaacatctttccatgctacttgtgcacaagcagcaggtgtgctaatgcagcctgat
gattggccatttgttgtatttatcacatgttaccgtcacaaaggatccattactacacaa
cgcaataaggcaatcatgcaagaattgtcagtaggacagaaagttatctgtaaacacaaa
aatggccgatattaccaatgtgaagttgtcaagcttacaaaggaaacattttatgaggtt
aactttgatgatggttccttcagtgacaacctttttccagaggatattgtgagtcgtgat
tgtgtacatctaggaccccctgaagaaggtgaagtagtccaagtaagatggacagatggt
ttagtgtatggtgctaaatttgtcgcagcacatgtcattcaaatgtaccaggtggagttc
gaagatggatcacaactatcagtcaagcgagatgatgtttatactctagaagaagaatta
cctaaacgagtcaaaacaagattgtcatttgcctcagacatgcgatttgatgggatattt
gcagataaagaatttaagcaagaaaccaagcggcagcgtgttataaactcaaggtatcga
ggtgactatatagaacctgtagtttaccgagccataatggagtaa

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