Polypterus senegalus (gray bichir): 120514403
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Entry
120514403 CDS
T08668
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120514403 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120514403 (prpf38a)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120514403 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
120514403 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120514403
NCBI-ProteinID:
XP_039590687
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All DBs
Position
14:135051681..135079205
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AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGSSVDCYKYL
EPLYNDYRKIKAQNRNGEFEVMHVDEFIDNLLHSERVCDVILPRLQKRHVLEEEELLEAR
VSALEEDLDEVESSEDDDDEDDKPERGQSPEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPAHHRSHRHRSHSRSPERSKKSH
KKSRRGNE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaggacagtgaaagatgcgaatagtatacacggtactaatccgcagtattta
gtggagaagattatccgcactcgaatttacgagtctaaatattggaaagaagaatgcttc
ggattgacagctgagctagtggtggacaaagccatggaactcaaatatgttggaggagtg
tatggtggcaatattaaaccgactcctttcctttgcttgacattgaagatgctccaaatc
cagcctgagaaagacatcattgtggagtttatcaaaaatgaagatttcaagtacgtacgt
ttacttggagccatgtatatgcggctgacaggctcctcagtggattgctacaagtatctg
gaacccctttacaatgactatcggaaaatcaaggcgcaaaacagaaatggagaatttgaa
gtgatgcatgtggatgaatttatcgacaatctgttgcatagtgagcgggtgtgtgatgtc
attctacccaggctacagaaacggcatgttctggaggaagaggagctactggaggcgagg
gtcagtgccctggaagaagaccttgatgaggttgagtcaagtgaagacgacgatgatgag
gacgataagcctgaacgaggccagtctccagagcctcaccgcaggagctacagagacatg
gacaggccacggaggtcgccttcaccccgctacagacgcagccgatctccacggcggcgc
agtcgatcacccaagagacgcagcccttcaccacgacgagagagacaccgcagtaagagt
ccacggcgccatcgcagtcgctctagggagaggagacaccgttcgaaatcaccagcacac
cacagaagccacaggcaccgcagtcactcaagatctccagaaaggtcaaagaagagtcac
aaaaagagccgacgagggaatgaatga
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