Polypterus senegalus (gray bichir): 120514501
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Entry
120514501 CDS
T08668
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120514501 (znfx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
SLFN-g3_helicase
ResIII
DEAD
PhoH
HOOK_N
AAA_25
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120514501
NCBI-ProteinID:
XP_039590839
LinkDB
All DBs
Position
14:36347852..36437145
Genome browser
AA seq
1933 aa
AA seq
DB search
MDDNAINRRGGHRGRGGIRGRARARGGANADNRRDEGAPWLGGNRAPNNQRDGWRGNRIG
ADHRELEQGVLAGGRNRGANFEIGRNHIVGDGEWEGRNENGAWRRGRGGRAPRGGQGRPS
GEPRAGNDQGPGAKRLGFNFLQELSEKEPSEVAITLSSSAALRDLLEQPFLRQDMVQLLC
KVLSKAVGCRLDRKIVQHLIGALKNSAFLQTVLPHYIMGMVIEPVPARRRQYPEHLEQIL
TLLSDMVNIFPASSIQVASMLVTILQPVINSLRATGVTVSEKTEQNLEKIMEIVTHLQEK
RRDGTLHSDTYTLMGPDEVSPPGEGDFRTISIYPTSDEIHAEEKPFLRPNVISHGYASTA
VYLDTHFRLLREDYVRPLRDGIRELLRNYLAPAEREQGNMKNKRFDDIRVYFDTRLLVPL
CTPSGIAYKVHFDTRPLKFVRWQNSKRLLYGSLVCMSRDNFETFLFATVADRDPEDLQKG
FVKLTFMKESHEALAAVQPSDSFLMVETTAYFEAYRHVLEGLQELQEDDLPFQRYIVECQ
SDVTYPGYLNNPGALFDLSVIRAPPEESNEQGAPKQRLPLLPFDVRNLRAWPVQEELGLD
ESQMNAFQLALTKELAIIQGPPGTGKTYVGLKIAQAILANERVWQRQHDRNPVLVVCYTN
HALDQFLEGIHSFLEKGIVRVGGRSNSEILKSFTLRELRGAKNFRKTLPNHLRRAYFEIT
SELAQAEHRIREEAGHLECILRGVLHEQFLERFIRVEHWNSLHYLPFYKDIPVYGKKDSL
ILEWLGLGTSGFQMTHHHQDAEHNAEAENENENEDEESEELITVEEQAALIEAERMIDET
DVRDKTRKKKEDSTVKALSGLLLAMSLDHKEEQEDTLGNQAPQDDGWKMQREQKKRIKQR
MKKELQKTSVMDKEEEEGIRDIWRLDLKDRWRLYRLWVQRYQTDMRRRAQQSEQLYQNAA
ERLAEIRLREDLCILKEARVIGMTTTGAAKFRKLLQEVKPRIIIVEEAAEVLEAHTITTL
SQACQHLILIGDHQQLRPSATVYDLAMNFNLEVSLFERLVKVKFPYVRLNYQHRMRPEIA
QLLTPHIYSELENHPSVEQYENVKGVSSNLFFVEHSFPEQEIQDGRSHQNLHEAQFVVAL
CQYLICQDYKPSQITILTTYTGQLYCLRKLLPARRFSGVKVHVVDKYQGEENDIILLSLV
RSNQDGKVGFLKIANRICVALSRAKMGLYCIGNMKLFGKIQLWSNILHTLRENKHIGHSL
ILCCQNHPDTRSLVSSAKDFQQVPEGGCSRPCETRLQCGHVCTRACHPYDKDHKLFQCLK
PCQKVLCGLGHRCPGLCFQDCQECIVPVEKDIPYCGHKQMVPCYEDPLDFICKVPCPKKL
RCGHPCTNFCGESCTKKCAVVIQMKLACGHVQEVECYYRRQVSEGGKQPACKVACETKLH
CEHPCSGTCHTCFQGRFHVDCSLICRRPLICSHHCREPCTTDCPPCSLPCENRCVHSACK
KACGELCAPCVEPCEWSCPHFRCTNLCHEPCNRPPCNEPCNKQLKCGHPCNGLCGEPCPN
KCRICHHTELTEIFFGNEDEPDARFVQMEDCFHILEVTGLDHYMSLDGEGHGSNDEERTD
QQNRVIKLKDCPKCRTPIRRNLRYGTIINQSLDEIEKVKRLILGCPVEAEKKQKYLSRLL
KEKQSISLLLPKEFQNLKSQLSQPELPQRTLNLLEIMMTFYERLAKLKEAERKMEGEALR
IFNTRVAECIEWLESPSMRFSEQQIFDLQREFQRLGLLANLNERCRLAHVAGRSLSQEVK
NDVACLRDLLQGRSKFTSEDEEKVHRKLEELNSDLPKSGLGITQQEKEMIVRAMGLSQGH
WYKCPSGHVYVITECGGAMESRKCPHCNHDIGGSNHALATGNQVATEMDGALHPAWSEAN
NLLNFEDIRRLNL
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaatgctatcaacagaagaggtggccaccgaggacgaggtggcataagggga
agagcaagagcaagaggtggagctaatgctgacaacagaagagatgaaggcgctccttgg
ctaggtgggaatcgagccccaaataaccaaagagatggttggagaggtaaccgtatagga
gctgaccacagggagctggaacaaggtgtactcgcaggaggtcgaaacaggggagcaaac
tttgaaattggaagaaatcatatagtgggagatggagaatgggaagggagaaatgaaaat
ggtgcttggaggagagggagaggaggacgagctccaagaggaggacaaggaaggccaagt
ggagaacccagagctggaaatgatcagggaccaggtgctaagaggctgggctttaatttt
cttcaagaactttctgagaaagagccttcagaagtggccatcacattatcatcaagtgct
gctttacgcgatcttttggagcaaccatttttgagacaagacatggtgcagcttctctgc
aaagttcttagcaaggctgttggatgccggcttgaccgaaagatagttcagcatttaata
ggagctcttaagaattctgcttttctccagactgtcctccctcattacattatgggtatg
gtgatagagccagtgccagctcgccggcgccagtacccagaacacttggagcagattttg
actttactttctgatatggtaaatatcttcccagccagctcaattcaagtggcctccatg
ctggtgacaatccttcagccagtaattaacagcttacgagctacaggtgtgacagtgtct
gaaaagactgaacagaacttagagaaaatcatggaaattgttactcatcttcaagagaag
cgaagagatggtactttgcattctgatacatataccttaatggggcctgatgaagtgagt
cccccgggagagggtgatttcaggaccatatccatctatcccacctccgatgaaatacat
gctgaagagaaaccttttctcaggccaaatgttatttcacatggctatgctagcacagct
gtctacctcgacacacactttcgtctgctcagggaggactatgtgcgccctcttagagat
ggaatcagggagctgctaagaaattaccttgccccggcagagagggaacaagggaacatg
aagaataaaagatttgatgacatcagggtatattttgacactcgtttgcttgtccccctc
tgtactccctcaggcattgcctacaaagtgcactttgacactcgaccattgaagtttgta
cgctggcaaaattcgaaacgattgctgtatggctctctagtgtgcatgtcacgtgacaac
tttgagacatttctgtttgctactgtggcggaccgtgatccagaggatcttcagaagggg
tttgtaaagctcacattcatgaaggaaagccatgaagcacttgctgccgtgcagccttct
gactctttcctcatggtagagacaacagcatactttgaggcttatcgtcatgtacttgaa
gggctgcaggaattgcaagaggatgaccttccgtttcagaggtacattgtggaatgccag
tcagatgtcacctacccaggttacttgaacaatcctggagctctttttgatctgtctgta
attcgagctcctcctgaagagagcaatgagcagggagctccgaagcagcggttgcctctt
ttaccatttgacgtgcgaaatctcagggcctggccagttcaggaggaactaggtctggat
gagtcccagatgaatgcttttcagttggcattgacaaaggaattggccattatacaagga
ccaccagggactggaaagacctatgtggggctgaagattgcccaagctattctggcgaat
gaaagagtatggcaacgacagcatgacaggaaccctgtgctggtggtctgctatactaat
catgcactggaccagttcctggaaggcattcattcttttttggaaaagggtattgtgaga
gtgggtggccgaagcaatagtgaaatccttaagagttttacactgagagaactgagaggt
gctaagaattttcgaaaaactttacctaatcacctgcgacgagcttactttgagattaca
agtgaactggcccaggctgaacatcggatccgagaggaggcagggcatcttgaatgtatc
ctgcgtggggttctgcatgagcaatttctggaacggttcattcgtgtggagcactggaat
tctctccattatctgccattttacaaggacatccctgtctatggaaaaaaagattccctg
attcttgagtggctgggcctaggaacttcaggcttccagatgacacatcatcatcaggat
gcagagcacaatgcagaagctgaaaatgaaaatgagaacgaggatgaagagagtgaagag
ctgattactgtggaagaacaggcagctttaatcgaagctgagaggatgattgatgaaact
gacgtaagagacaagacccgcaagaagaaggaggactcaactgtgaaggccctatccgga
ctattgcttgccatgagcctagaccataaggaggagcaggaggacactttgggcaatcag
gctcctcaagatgatggctggaagatgcagcgtgagcagaaaaaaagaatcaaacagcgc
atgaagaaggagcttcagaaaacttcagtgatggataaggaagaggaagaaggtattaga
gatatctggaggcttgatctgaaagaccgctggaggctatatagattgtgggtgcagcgc
taccagacggacatgcgtcgtcgtgctcagcagtcagaacaattgtaccagaatgctgct
gagcgccttgccgagatccgactgcgagaagacctttgcattctgaaggaggcccgtgtc
attggaatgacaaccacaggggctgcaaagttcaggaagctgctacaagaagttaaaccc
aggatcattattgtggaggaggctgcagaagtgttggaggcacatacaatcaccactttg
agccaagcctgccagcaccttatcctaattggagaccaccaacagcttcgccccagtgcc
actgtctatgacttggcaatgaactttaacctggaagtatccttatttgaaagactggtc
aaagtaaaattcccttatgtcaggctcaattatcagcatcgaatgcggcctgaaatcgct
cagcttctcaccccccatatctattcagagctggagaaccacccctctgttgagcaatat
gaaaatgttaagggtgtctcatcaaacctcttttttgtggagcattcttttccggagcaa
gaaattcaagacggccgtagccaccagaacctccatgaggcccagtttgttgtggcactc
tgccagtacctaatctgtcaagactataagccttcacaaatcacaatactcaccacatac
actgggcagctttattgtctgcgtaaactccttccagcacgtcggttttctggggtaaag
gtacatgtggtggacaagtaccaaggagaagaaaacgatattatccttttatcacttgtt
cgcagcaaccaagatggcaaggtagggttcctaaaaatcgctaaccgtatatgtgtggca
ctttcccgtgccaaaatggggctttattgcattgggaacatgaaactgtttgggaaaatt
caactgtggagcaatatcctgcacacattgagagaaaataaacatattggacattctttg
atactttgctgccagaatcaccctgacaccaggtccttagtatcatcagccaaagacttc
caacaagtacctgaaggtggctgcagtagaccatgtgagacacgcctacagtgtggacat
gtttgtaccagagcttgccacccctacgacaaagatcacaaacttttccagtgcttaaaa
ccctgtcagaaagtactgtgtggtttagggcaccgttgtcctggactttgtttccaggac
tgccaggaatgcatagtccctgtggagaaggatatcccctactgtgggcataaacaaatg
gttccctgttacgaggaccccttagacttcatctgcaaagtgccttgtcctaagaagtta
cgctgtgggcatccatgcacaaatttctgtggagagtcatgcaccaaaaaatgtgccgta
gttatacagatgaaattagcctgtggccatgtgcaggaggtggaatgttattatagaaga
caagtatctgagggtggcaaacagccagcttgcaaggtagcatgtgaaaccaagttgcac
tgtgagcacccctgctctggcacatgccatacttgtttccaaggccgattccatgtggac
tgcagcctaatttgccgaagaccactcatctgttctcaccattgccgggaaccctgcaca
actgactgcccaccctgctctttgccatgtgaaaaccgttgtgtgcacagcgcatgtaaa
aaagcctgtggtgaactttgtgctccatgtgtcgagccgtgtgaatggagttgtcctcat
tttagatgtaccaacctttgtcatgagccttgcaaccgtccaccatgtaatgagccttgc
aacaaacaattaaaatgtgggcacccctgcaatggcttgtgtggagagccatgcccaaat
aaatgtcgtatatgccatcacacagaactcacagagattttctttggtaatgaggatgaa
cctgatgcccgctttgttcaaatggaagactgtttccatattttagaggtgacaggtttg
gaccactacatgagcttagatggagaagggcatggtagcaatgacgaagagagaactgac
caacaaaatagagtaattaagctgaaggactgcccaaaatgccgcactccaattcgccgg
aacttgcgttacggcaccattataaatcaaagtctagatgagattgagaaggtcaaacgt
cttattcttggctgccctgtggaagccgaaaagaaacagaaatacttaagtcgtctgcta
aaagaaaaacaaagcatcagtcttcttttaccaaaagaattccaaaatctaaaatcacag
ctgagccaacctgagcttcctcagagaactttgaatcttcttgagatcatgatgactttt
tatgagaggctagccaaattgaaagaagccgagcggaaaatggagggagaggcactgaga
atttttaatacgcgggtggcggaatgcattgagtggctggaaagtcctagtatgcgtttc
tctgagcaacagatctttgatctgcagagagagtttcaaagactaggtttgctggcaaat
ctgaatgaacgatgtagacttgctcatgttgcaggaaggtctctgagccaggaagtgaaa
aatgatgtggcctgtttacgtgacctcctacagggtaggtccaagttcaccagtgaggat
gaagagaaagtccacagaaagctggaagagctaaattctgatctccccaagagtggacta
gggattacgcagcaggaaaaagagatgatagttcgggcaatgggcctctctcaagggcac
tggtacaagtgtccttctggccatgtttatgtcataacagagtgtggaggagccatggaa
agcaggaaatgtccacactgcaaccatgacataggtggcagcaaccacgccttagctact
ggaaatcaggtggcaacagaaatggatggagcccttcatccagcatggtctgaggccaac
aatttgctgaattttgaggatatcaggaggttgaatctgtga
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integrated database retrieval system
