Polypterus senegalus (gray bichir): 120514517
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Entry
120514517 CDS
T08668
Name
(RefSeq) F-box/WD repeat-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04114
Oocyte meiosis
psex04120
Ubiquitin mediated proteolysis
psex04218
Cellular senescence
psex04310
Wnt signaling pathway
psex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120514517
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120514517
04340 Hedgehog signaling pathway
120514517
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120514517
04218 Cellular senescence
120514517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120514517
03036 Chromosome and associated proteins [BR:
psex03036
]
120514517
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120514517
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120514517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-TrCP_D
WDR55
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
WD40_like
F-box
Beta-prop_Nup120_160
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
F-box_5
DUF1513
Beta-prop_NWD2_C
DUF4508
DUF6188
WDR54
Motif
Other DBs
NCBI-GeneID:
120514517
NCBI-ProteinID:
XP_039590866
LinkDB
All DBs
Position
1:complement(300193349..300333792)
Genome browser
AA seq
488 aa
AA seq
DB search
MIVPKQRKLSANYEKEKELCVKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQ
RDFITALPARGLDHIAENILSYLDAKALCAAELVCKEWYRVTSDGMLWKKLIERMVRTDS
LWRGLAERRGWGQYLFKNKPPDGTTPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIH
CRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRVLTGHTGSVLCLQYDERVII
TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT
LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR
LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAAL
DPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPSSQAESTRSPS
RTYTYISR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgattgttcccaagcagcgcaagctgtctgctaactatgagaaggagaaagaactttgt
gttaaatattttgaccagtggtctgaatctgaccaggtggaatttgttgagcatcttatt
tcccggatgtgtcactaccagcatggccacatcaactcctacttgaagccaatgttacaa
agggattttatcactgcactgccagcacgtgggctggatcacattgcagagaatatcctt
tcttatttggatgcgaaagctctttgtgcagcagaacttgtttgtaaagagtggtacaga
gtgacttcagatggcatgttgtggaagaaactcattgaaagaatggttcggacagactcc
ttgtggagaggcctagcggaaagaagaggatggggccaatacctgtttaaaaacaagcca
ccggatgggactacaccacccaattctttttaccgagcactttatccaaaaattatacag
gacatagagacaatagagtctaattggcgctgtggtagacatagcttacaacgaatccat
tgccgcagtgagacaagcaagggagtctactgcttacagtatgatgatcagaagattgtt
agtggattacgagataatactataaagatttgggataagaacacactggaatgcaaaagg
gttcttacaggacatacaggctctgtattgtgccttcagtatgatgaaagagttatcatt
actggttcttcagactcaactgtcagagtttgggatgtcaacactggagagatgttaaac
acattaattcaccactgtgaagcagtgttgcatttgcggtttaacaacggcatgatggtg
acctgttcaaaagatcgctccattgcagtatgggacatggcttcaccaacagatataaca
ctacgaagggtgcttgtaggacaccgcgctgcagtgaatgttgtagactttgatgataaa
tacattgtttctgcatctggtgacagaacaataaaggtgtggaacacaagcacttgtgag
tttgtgcgaactctaaatggacataagcgtggcattgcctgtttacagtacagagacagg
ctagtggtcagtggctcctcagacaatacaatcaggttatgggatattgaatgtggagca
tgtttaagagtacttgaaggacatgaagaattggtacgatgtattcgttttgataataaa
aggattgttagtggggcatatgatggtaaaattaaagtttgggatttagttgctgctctt
gaccctcgggctcctgcaggaacgctctgtcttagaacacttgtggaacattctggaagg
gtattcagacttcagtttgatgaatttcaaattgtcagcagttcacatgatgacactatc
cttatttgggattttttaaatgatccatcttcacaggcagaatctacacgttccccatct
cggacatacacatacatctcaagataa
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