Polypterus senegalus (gray bichir): 120514519
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Entry
120514519 CDS
T08668
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120514519 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120514519 (stau1)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120514519 (stau1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120514519 (stau1)
mRNA cycle factors
Stress granule specific factors
120514519 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
120514519
NCBI-ProteinID:
XP_039590863
LinkDB
All DBs
Position
14:36116086..36275091
Genome browser
AA seq
700 aa
AA seq
DB search
MSQIQVQSTALTLSTGNPLQNNSQPMKPLIPQPMMSIPSVPGCLPSENAGHPVKSSSLPS
SSATPISTAVVPHMANPKEKTPMCLVNELARFNKVQPVYKLLSEQGPAHSKIFAVRLALG
DQCWEAEGTSIKKAQHAAAASALAETTLPKPSIRSPRHTGRNSVSHLTMMTSRKHLIFHE
DLSRTFQHSENSLNQTVELNALCMKIGKKPIYKPIDPYPGMRPNFNYNVRAPGPYPRYYY
PFPPVGPVLYQMELSIGGQQFHGKGRTRQAAKHDAAAKALKFLQKEPLLEKKSEINGGES
DQNLNKSEISQVFEIALKRNMPVNFEVTKESGPPHMKSFVVRVSVGDFYGDGEGKSKKIA
KKNAATAVLKELKKLPSLPLVEKVQPRIKKKSKSIVKLQTSPEYGQGMNPISRLAQIQQA
KKEKEPEYTLITERGLPRRREFIMQVKINDQTAEGVGPNKKVAKRNAAEKMLELMGFKVP
PPHPPKPALKTDEKVPMKKTGDGRKVTFFEPGCPEEGASVSTGHKDDEFRMPYLSHQQLP
AGILPMVPEVAQAVGANQGHHTKDFSRPPINPAKATFTAMIARELLYGGTSPTAETILKN
NNSLAHLPLGPLTRPSEQLEYLSRVQGLEVEYKDFPKNNKNEFVSLINCSSQPPLISHGI
GKDVESCHDMAALNILKLLSDLDQQTNDKTGNGPMSVKAD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaattcaggtccagagtacagctcttactctctccacaggcaaccctctgcaa
aataactcgcaaccaatgaagcctcttattcctcagcctatgatgagtattccttctgta
ccagggtgtctgccatctgagaatgctggacatccagttaaaagctcatccttaccatcg
tcttctgctacccccattagtacagctgtagttccccacatggcaaaccccaaagagaaa
accccaatgtgtcttgtgaatgagttagccaggttcaataaagtccagcctgtatataaa
cttttaagtgaacaaggaccagctcactccaagatatttgcagtacgattggctttagga
gatcagtgctgggaagctgagggaaccagtataaagaaggcacaacatgcagccgctgcc
agtgcactggctgaaaccactttgccaaagcccagtattcgttcacctcgccacacaggc
aggaattcagtttcacatctaacaatgatgacatcacgaaaacatcttatctttcatgaa
gatttgagtcggacttttcaacattctgaaaacagtttaaaccaaacagtggagttaaat
gcactctgcatgaaaattggaaaaaaacctatttacaaacccattgatccctaccctgga
atgaggcctaattttaactataatgtccgggccccaggcccttatccaaggtattattat
ccctttccaccagttggcccagtcctctaccagatggaattatcaattggaggacagcaa
tttcatggcaaaggaagaaccagacaagcagcaaagcacgatgcagctgctaaagcatta
aaatttttgcagaaagaacctctgttagaaaaaaaatcagagatcaatggtggcgaatca
gatcaaaatctaaacaaatctgaaataagtcaagtatttgaaattgcactgaaacggaat
atgcctgtcaactttgaggttactaaggagtctggccccccgcacatgaaaagttttgtt
gtgcgcgtttctgtaggagacttttatggtgatggagagggaaaaagtaaaaagattgcc
aagaaaaatgcagcgactgctgtcctcaaggagcttaaaaaactcccttcactacccttg
gttgaaaaggtccaaccacgcattaaaaagaaatcaaagtcaatagtcaagcttcagacc
agcccagaatatggtcaaggaatgaatcccatcagtcgactagctcaaattcagcaggca
aagaaagaaaaggagccggagtacacattaattacagagaggggtcttcctaggcgcaga
gaattcattatgcaggttaaaatcaatgatcagactgccgaaggggtgggtcctaacaag
aaggttgctaagcgtaatgcagcagagaagatgttggaactaatgggcttcaaagtgcct
ccaccacatccacccaaacctgcactaaaaactgatgaaaaagtgccaatgaagaagaca
ggtgatggcagaaaagttacattttttgagccaggctgtcctgaagagggagcttcagtc
tctacaggccataaggatgatgagttcagaatgccatatttaagccatcagcagctccca
gcaggaatcctgccaatggtgccagaagtggctcaggctgtgggtgccaatcaaggacat
cacaccaaagacttcagcaggcccccaattaacccagccaaggccacatttacggcaatg
atcgcacgggaactgctctatggtggcacatctccaacagctgagactattttgaaaaat
aacaacagtcttgcacaccttcctctcggaccacttacacgtccatcagagcaacttgaa
tatctttccagagtacaaggacttgaggtggagtataaagatttccccaagaacaacaaa
aatgaatttgtttctttgataaactgttcttctcagccacccctcatcagtcatggaatt
ggtaaagatgtggaatcatgccatgatatggctgcccttaatatattgaaattattgtca
gatttggaccaacaaacaaatgataaaacaggaaatggaccaatgtcagtgaaagctgat
tag
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