Polypterus senegalus (gray bichir): 120514580
Help
Entry
120514580 CDS
T08668
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120514580 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120514580 (prpf38b)
Spliceosome [BR:
psex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120514580 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
120514580 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
120514580
NCBI-ProteinID:
XP_039590969
LinkDB
All DBs
Position
14:110494038..110516990
Genome browser
AA seq
519 aa
AA seq
DB search
MANNTALVAGTPQQQQQQAANKPAASGKQGNVLPLWGNEKTMNLNPMILTNVLSSPYFKV
QLYELKTYHEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYK
LFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPSDLLDWFDAFLDDEEELDVKAGG
GCVMTIGEMLRSFLSKLEWFSTLFPRIPVPVQKIIDQQLKSRPRKIAKKDGKDDVEEPVR
HTDRRRSRSPKRSTSPRRSPQRSRSRSHHDGHGSTSFDRELERERERQRKEREIRDRGDK
DRRRSRSPERAVERRRSRSKERRRSRSWSKEKKNDRRERDKEREKENERSKRKERDHEKE
RVSDRDREWDKSRDVEKSKEKRSKLESEERKQKDDKEEKRHRDERKIKRHSRSRSRERKH
RSRSQSKNRSGKRSRSKSKERSNKHKSEKSNKRSRSGSRGKVDADEKIKKKERSHSKEKA
HKRSRSKERTYRRENNENKEHSNKHERRRSQSADCGERL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacactgcgttggtggctgggactccgcagcagcaacagcaacaggccgcg
aacaaaccagcggcgtccggaaagcaggggaacgtcctacccctttggggcaacgagaag
acaatgaatctcaaccccatgatcctgaccaacgttctctcatccccctactttaaggtg
cagctgtacgagttgaaaacctaccacgaggtcgtggacgagatttacttcaaggttaca
catatagaaccatgggaaaaaggcagcagaaaaacagcaggccagactggcatgtgcggc
ggggttcgaggggttggaactggcggcatagtatctacagctttctgcctattgtacaaa
ttgtttacacttaaactaacccgaaaacaagtaatgggactgattactcacacagattct
ccgtacatcagagctcttggcttcatgtatatccggtatacacagcctccttcagacctt
ttggattggtttgatgctttccttgatgatgaggaggagctcgatgtaaaagctggtgga
ggctgtgttatgacaattggtgaaatgcttcgctctttcctttcaaaacttgaatggttt
tcaaccctcttcccaagaattccagttccagttcaaaaaataatagaccagcagttgaaa
agcagaccaagaaaaattgctaaaaaagatggcaaggatgacgttgaagaacctgtgcga
cacactgatcgtaggcgctcaaggtctccaaaaagatctaccagtcctcgcagatctcca
caaagatctcggagtcggagtcatcatgatggacatggctcaaccagttttgacagggag
ttggaaagagagcgtgaaaggcaaagaaaagaaagggagatcagggatagaggggacaag
gatagaagacgttcacgaagtcctgaaagagcagttgagcgccgacgcagtaggagcaaa
gagaggcggcgtagtcgcagttggagtaaggagaaaaaaaatgataggcgagaaagagat
aaggaaagggaaaaggaaaacgagagaagtaaaaggaaagagcgcgatcatgaaaaagaa
agagtaagtgatagggaccgagagtgggataaatctagagatgttgaaaaatctaaagaa
aaaagaagcaaactagaatctgaagaaagaaaacaaaaagacgacaaggaggagaagcgg
cacagggatgaacgcaagattaagagacacagtagaagccgaagcagagagagaaagcat
agaagtaggagtcagagcaagaatcgaagtggcaaacgcagcagaagtaaaagcaaagag
agatcaaataaacacaagtcagaaaaatcaaataagcgaagtaggtctggaagtagaggg
aaggtagatgcagatgaaaaaatcaagaagaaagagcgtagtcatagtaaggagaaggcg
cacaagcgtagtagaagtaaagaaagaacctacaggagggagaacaatgaaaataaggaa
cactcaaataaacatgagcgaaggagaagtcagagcgctgattgtggtgaaagactttga
DBGET
integrated database retrieval system