KEGG   Polypterus senegalus (gray bichir): 120514580
Entry
120514580         CDS       T08668                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120514580 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psex03041]
    120514580 (prpf38b)
Spliceosome [BR:psex03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120514580 (prpf38b)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    120514580 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 120514580
NCBI-ProteinID: XP_039590969
LinkDB
Position
14:110494038..110516990
AA seq 519 aa
MANNTALVAGTPQQQQQQAANKPAASGKQGNVLPLWGNEKTMNLNPMILTNVLSSPYFKV
QLYELKTYHEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYK
LFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPSDLLDWFDAFLDDEEELDVKAGG
GCVMTIGEMLRSFLSKLEWFSTLFPRIPVPVQKIIDQQLKSRPRKIAKKDGKDDVEEPVR
HTDRRRSRSPKRSTSPRRSPQRSRSRSHHDGHGSTSFDRELERERERQRKEREIRDRGDK
DRRRSRSPERAVERRRSRSKERRRSRSWSKEKKNDRRERDKEREKENERSKRKERDHEKE
RVSDRDREWDKSRDVEKSKEKRSKLESEERKQKDDKEEKRHRDERKIKRHSRSRSRERKH
RSRSQSKNRSGKRSRSKSKERSNKHKSEKSNKRSRSGSRGKVDADEKIKKKERSHSKEKA
HKRSRSKERTYRRENNENKEHSNKHERRRSQSADCGERL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggctaacaacactgcgttggtggctgggactccgcagcagcaacagcaacaggccgcg
aacaaaccagcggcgtccggaaagcaggggaacgtcctacccctttggggcaacgagaag
acaatgaatctcaaccccatgatcctgaccaacgttctctcatccccctactttaaggtg
cagctgtacgagttgaaaacctaccacgaggtcgtggacgagatttacttcaaggttaca
catatagaaccatgggaaaaaggcagcagaaaaacagcaggccagactggcatgtgcggc
ggggttcgaggggttggaactggcggcatagtatctacagctttctgcctattgtacaaa
ttgtttacacttaaactaacccgaaaacaagtaatgggactgattactcacacagattct
ccgtacatcagagctcttggcttcatgtatatccggtatacacagcctccttcagacctt
ttggattggtttgatgctttccttgatgatgaggaggagctcgatgtaaaagctggtgga
ggctgtgttatgacaattggtgaaatgcttcgctctttcctttcaaaacttgaatggttt
tcaaccctcttcccaagaattccagttccagttcaaaaaataatagaccagcagttgaaa
agcagaccaagaaaaattgctaaaaaagatggcaaggatgacgttgaagaacctgtgcga
cacactgatcgtaggcgctcaaggtctccaaaaagatctaccagtcctcgcagatctcca
caaagatctcggagtcggagtcatcatgatggacatggctcaaccagttttgacagggag
ttggaaagagagcgtgaaaggcaaagaaaagaaagggagatcagggatagaggggacaag
gatagaagacgttcacgaagtcctgaaagagcagttgagcgccgacgcagtaggagcaaa
gagaggcggcgtagtcgcagttggagtaaggagaaaaaaaatgataggcgagaaagagat
aaggaaagggaaaaggaaaacgagagaagtaaaaggaaagagcgcgatcatgaaaaagaa
agagtaagtgatagggaccgagagtgggataaatctagagatgttgaaaaatctaaagaa
aaaagaagcaaactagaatctgaagaaagaaaacaaaaagacgacaaggaggagaagcgg
cacagggatgaacgcaagattaagagacacagtagaagccgaagcagagagagaaagcat
agaagtaggagtcagagcaagaatcgaagtggcaaacgcagcagaagtaaaagcaaagag
agatcaaataaacacaagtcagaaaaatcaaataagcgaagtaggtctggaagtagaggg
aaggtagatgcagatgaaaaaatcaagaagaaagagcgtagtcatagtaaggagaaggcg
cacaagcgtagtagaagtaaagaaagaacctacaggagggagaacaatgaaaataaggaa
cactcaaataaacatgagcgaaggagaagtcagagcgctgattgtggtgaaagactttga

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