Polypterus senegalus (gray bichir): 120514652
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Entry
120514652 CDS
T08668
Symbol
mypn
Name
(RefSeq) myopalladin isoform X1
KO
K22028
myopalladin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120514652 (mypn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120514652 (mypn)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120514652 (mypn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_C17orf99
V-set_CD47
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
120514652
NCBI-ProteinID:
XP_039591083
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Position
1:306357989..306715740
Genome browser
AA seq
1379 aa
AA seq
DB search
MQDDSLEASTSISQLLRESYLAESRIHQRHSEVSRSESNLQHSFYESITGNPEDLVTQDD
FTDLSAFLSQEELDKSVNLAREAIAQCPKEIKLGEKEQGKAPLVDLGSQQTTPVIIEKQT
YSSFRQENVYKSSRDPLQEPRKPTRNSPYGSDSQCKKEFLNKAADFIEELSSLFKANSSK
RIRPRACKANRSRYQSKAQSESSSYSYTIDERERPAAPIASQLIEEVTLDENEPEMLPEE
EDENTAEVTEIEPLEESTEESASDTYYSEQPLGVPPSFIQKLKSREVPEGSKVQLDCIVT
GVPTPEVRWFCEGKELENSPDIQILNVGELHSLIITEAFEEDTGRYSCFASNFYGTDSTS
AEIYIEGASSSESEGEQNIDNMPQIQKKTSVSTTITSTTSGSEAAYQETSTVRAARSQPV
TQLPAEKCQSPSNYPKGLDGRPLMAAPVFTKMLQDLTAYEGQLVVLECRVKGAPSPKVEW
YREGTLIEDSPDFRILQKKPRTLAEQEEICTLVIAEVFPEDSGTFTCTASNKYGTVSSIA
SLNVKGNQNNSSSLQATHTSLMVESSHQKTSRAATTDPPGCLKTKLVNHNEPRSSSKAGL
RVHFKLPEDDKESEDSSDEGILFFKQQKSDLRNANGQLPGGTTPMPPGKEPPPVLAKPKL
DPVQLQLLHNQVLLEQQQESGTHSQMNPSFTMSVGPVNSGPAAFQQPPTSPPSSGLPQTF
NYARPKQFIAAQSATIVTSLPSTESPVLSPNLMPPVSQTSRNETFYIGSPSSGFSQPRVL
QSPTSPTRFVSSPPPAPSVFSPFTIRPQSPLQAASPTLSSSTPSPIQDPVAFLSSVLPSL
PTSPPTNAMGLPRSAPAVSSQVLMKKNLKPSRSTTDDEIRDSKDAVLHDLEKKLRFKEEP
AHNGQHRFTYEEKMARRLLGPNNSPTVFNFEEVQESPPSQDFKYMIESTRNTLGKQQEYK
VSSFEQRLMSEIEFRLERTPVEESDDEIQHDEIPTGKCIAPIFDKKLKHFRVVEGTAVTF
TCKVVGIPVPKVYWFKDGKQISKKNEHYKMKREGDGTCSLVIEATTNDDDGNYTIMAANP
QGRISCSGHLLVQTGPIRRRLTPTIHSQRVRSRSQEGDEGEPIQERFFRPHFLQAPGDLV
AHEGRLCRLDCKVSGLPNPDLMWLLNGKPIYSDNNHKMLVRENGVHSLLIDPLMQSDAGT
YTCIATNKAGQNSFSLELSVVAKEVKKAPVFLEKLQNTGIPEGTPVRLECRVVGMPPPLI
FWKKDNDTIPVVKERMSMHQDATGYVCLLIQPTRKEDAGWYTVSAKNEAGIVSCTARLDI
YAQWHQQIPQPMKKVRSSGSRYAALTGQGLDILSAFPSTDSSPSPFSPSAEGTVESEEL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgatagtttagaggcatccacgtcaatatctcagcttttgagagagagttat
ttggcagaatccagaatccatcaaaggcacagtgaagtgagccgatcagaaagcaatttg
cagcactccttctatgaaagtataacaggaaatcctgaagacctggtgacccaggatgac
ttcaccgatctctcagcctttttaagtcaggaggaactagataaaagtgtgaatctcgca
cgggaggctattgctcagtgccccaaggagataaaattaggagaaaaggaacagggtaag
gccccattggttgacttaggaagccaacagacaactcctgtgataatagagaaacaaaca
tactccagtttccgacaagagaatgtttacaaaagctccagagatcctctgcaggagcca
agaaagccaaccaggaacagcccctatggatctgactcgcagtgtaaaaaggaatttcta
aataaggctgctgattttattgaagaactttcatctcttttcaaagccaacagttcaaaa
aggatcaggccccgggcatgtaaagctaacaggagtagataccaaagtaaagctcagtca
gaaagctcctcttattcatacaccatcgatgaaagagagagacctgctgcccctatagca
agccaactaattgaagaagtgacactagatgaaaatgagcctgaaatgctgcccgaggaa
gaagatgagaacacagcagaagttactgaaatagagcctttggaagaatccactgaggaa
agtgcgtcggacacttattacagtgagcagccactaggagttcctcccagttttattcaa
aagctaaaaagcagagaggtaccagaaggtagtaaggttcagctggattgcattgttacg
ggagtcccaacccctgaagtacgatggttctgtgaggggaaggagttggagaacagccca
gatattcagattctcaatgttggggagctgcattccctgatcatcactgaggcatttgag
gaggacactggacgctactcttgctttgcttctaatttctacgggactgactccacctct
gctgagatttacattgaaggtgcctcatcatcagaatctgaaggagagcaaaacattgac
aacatgccacaaattcagaagaaaacttcagtgtctacaactatcaccagcactacatct
ggatcggaagctgcttatcaagagactagcactgtccgagcggccagatctcagcctgtg
actcagctgccagcagagaagtgccaaagccccagcaactatccaaaggggttagatgga
agaccgttaatggctgctccagttttcacaaagatgcttcaggatttgaccgcatacgaa
ggacagctggtagtacttgaatgccgagtgaaaggagctccgtctccaaaagtggagtgg
tacagagaaggaacattaattgaagattctcctgattttagaattttacaaaaaaagccc
aggaccttggctgaacaagaagagatttgcaccttagtcattgcagaagtatttccagaa
gactctgggacattcacgtgcactgcaagcaacaaatatggcacagtttcaagtattgcc
tccttaaatgtaaaaggcaatcagaataatagttcctccctccaggcgactcacactagc
ctaatggtggaatcatctcatcagaaaacatcccgagctgcaacaactgacccccctggc
tgtttgaaaaccaaactggtgaaccacaatgagccccgctctagctccaaagctggcctt
cgcgtgcattttaaactaccagaagacgacaaggagagtgaagattcatctgacgaagga
attcttttcttcaagcagcaaaagtcagacttgagaaatgcaaatggacagctacctgga
ggaacaacccccatgcctcctgggaaagagcccccgccagttcttgcaaagcccaaactt
gatcctgtacaactccagcttcttcacaaccaggtattgcttgagcaacaacaagagagt
gggacacactcacagatgaacccttcattcaccatgagtgtagggccagttaactctggc
cctgctgcctttcagcaacctcccacctcaccccccagcagtggcctcccacagaccttc
aactatgcaaggccaaagcagtttattgctgcccagagtgccacaatagttaccagtctg
ccctcgactgaatccccagtcctgtcaccgaatctcatgcccccagtgtcacagacttca
aggaatgaaaccttctacataggatccccctcctcaggattctcccagcccagggtgctg
cagtctcccaccagtcccactagatttgtcagctcccctccgcccgctccatcagtgttc
tctcctttcactatacgacctcagtcccccttgcaggctgcctctcccactctcagcagc
tcaacaccaagccctatccaggatcctgtggcctttctcagttctgttctgccatctctt
ccaacatccccaccaacaaatgccatggggcttccccggagtgctcctgctgtctcctcc
caagtgctaatgaagaaaaatctaaagccttctagatctacaactgatgacgaaatccgt
gactcgaaagatgcagtccttcatgacttggagaagaaactgagatttaaagaagaacca
gcacacaatggacagcatagattcacttatgaggaaaaaatggcccgcagactgcttgga
ccaaataactcaccaacggttttcaactttgaagaggtgcaagaaagtcctccttcacag
gactttaaatatatgatagagtcaacccgcaacactcttggtaaacaacaggaatacaaa
gtttccagttttgagcaaagactgatgagtgaaattgagtttcgtcttgagcgcactcct
gtggaagaatcagatgatgaaattcagcatgatgaaatccctactgggaagtgcattgcc
ccaatatttgacaaaaaactgaagcatttccgagtggttgaaggaactgctgttacattc
acctgtaaagtggtgggaattcctgtcccaaaggtgtactggttcaaagatggaaaacaa
atctccaagaaaaacgagcattacaaaatgaagagggaaggagacggcacctgctccctg
gtcattgaagcaacgacaaacgatgatgatggcaactatactatcatggcagcaaaccca
cagggcagaatcagctgctctgggcatttgctcgtacagactggaccaatacgacgcagg
ctaactccaactattcattcgcaaagggtgcgatcacgatcacaggaaggggatgaagga
gagcctatccaggagcgattctttagacctcactttcttcaagctccaggagacttagta
gcccatgaaggccgactttgccgacttgactgcaaggtgagtggattgccaaatcctgat
ctgatgtggctcctgaatggcaaacccatttactcagacaacaaccacaaaatgctagta
agggaaaatggtgtccactctctcctcattgacccactgatgcagagtgatgctgggacc
tacacttgcattgcaaccaacaaagcagggcagaattccttttccctggagctctctgtt
gtagcaaaagaggttaaaaaggccccagtttttctggaaaagctgcaaaacacagggata
cctgaagggactccggtgaggctagagtgccgagtggtgggcatgccacctcctctgatc
ttctggaagaaagacaatgacaccatcccagtagtcaaggagagaatgagcatgcaccag
gatgccacaggatatgtttgtctgctgattcagccaaccagaaaagaggatgctggttgg
tatacagtatcagctaaaaatgaagcagggatagtatcctgcacagccaggctagatata
tatgcccagtggcatcagcagattccccagccaatgaagaaggttcgatcatcgggtagc
cggtatgctgccctcaccggtcaggggctggacattttgtctgccttcccttcaacagac
agcagcccttcaccattctccccttcagcagaagggactgtagagagtgaagagctgtga
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integrated database retrieval system