KEGG   Polypterus senegalus (gray bichir): 120514804
Entry
120514804         CDS       T08668                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120514804 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psex03019]
    120514804 (rae1)
   03036 Chromosome and associated proteins [BR:psex03036]
    120514804 (rae1)
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120514804 (rae1)
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120514804 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_RFWD3 ANAPC4_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th ExoI_SH3
Other DBs
NCBI-GeneID: 120514804
NCBI-ProteinID: XP_039591301
LinkDB
Position
14:complement(29448158..29473585)
AA seq 369 aa
MSMFGTSSGFGSAGASMFGSTATDNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHSGPVLDVCWSDDGSKVFTVSCDKTAKMWDLNSNQA
IQIAQHDAPIRTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMSLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtatgtttgggacaagttctgggtttggttcagctggagccagcatgtttggcagc
acagcgacggacaatcacaatcccatgaaggacattgaagtaacttcaccacctgatgac
agtattagctgtttagcatttagtcctcccactctgccagggaattttcttatcggagga
tcttgggctaatgatgtccgctgttgggaggtccaggataatggacagactgttcctaaa
gcacagcagatgcacagtggtcccgtgctcgatgtctgctggagtgatgatggaagtaaa
gtctttactgtctcatgtgacaaaactgcaaaaatgtgggacctcaatagcaatcaagcg
atacagattgcacagcatgatgccccaattagaactgtacactggataaaagcacccaat
tatagttgtgtgatgacgggaagctgggacaaaactttaaagttttgggatacacgttct
ccgacaccaatgatgtcattgcagttacctgagcgatgctactgtgctgatgttgtttat
cccatggcagtggttgcaacagctgaaaggggcctcattgtctaccagttggaaaaccag
ccctctgagtttcgtagaattgaatctccactgaagcatcagcaccgctgtgttgccatc
tttaaggataaacaaaacaagcccactggctttgcactgggcagtattgaaggaagagtt
gccatacattatattaatccacccaatccggctaaggataattttacatttaagtgccac
agatcaaatggaaccaacacttctgcaccacaagatatttatgctgtgaacgccattgcc
tttcatccagtccatggtactcttgcaactgtggggtcagatggacgattcagcttttgg
gataaagatgctcgtaccaaactaaagacatctgagcaactggaccagcctatcacagcc
tgctgctttaaccacaatggcaacatctttgcgtattcctccagttacgactggtctaag
ggacatgaattttacaaccctcagaagaaaaattatatctttttgcgcaatgctgctgag
gaattgaagcctaggaacaaaaaatggtga

DBGET integrated database retrieval system