Polypterus senegalus (gray bichir): 120514933
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Entry
120514933 CDS
T08668
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120514933 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120514933 (tprb)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120514933 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
HALZ
Motif
Other DBs
NCBI-GeneID:
120514933
NCBI-ProteinID:
XP_039591515
LinkDB
All DBs
Position
14:complement(77464634..77552254)
Genome browser
AA seq
2389 aa
AA seq
DB search
MAAVLQQILERTELNKLPKPVQNKLEKFLGDQQVEIDALKSRHERFKVDGEQQYFEVEKR
LAQSQEKLLSEKQERQNLQEELKKLNDDCKELKEKNKEHEANKEKLSTEQAQLKRANDEL
ADEKRELTRKLEKKSQELEHYSEDLKRLNDKLVETSTAKVELQLKLDELQTSEVSVKYRE
KRMEQEKELLQNQNVWLNAELKTKTDELLAVTREKGNEILELKCSLENKKDEVTRLEEQV
NSLKSSNESFQKQIEDLMAKLKESKEQQASMEERFRNELNAHIKLSNLYKSAAEDSESKS
TELNRAVEELHKLLKEAGEANKATERRMKELELCKEEMEAELKGKITSLEKELENANELL
SASKRKGVSVLTEEELTTLSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKMEMKRV
NKYLDEIVQEVEAKAPILKRQREEYERMQTSVASLSAKLEQAMKEIHRLQKETDEANKRS
SVLERENQRFELLAADLSKQIRVLLMELEEARGNHVIREDEEVSSADISSSSEVISQHLV
TYRDIQDLQQQNQRLLVALRELGEAKEREEQETTSSRVSELQADLDKALSELEQLKDSRN
HQMQLVESIVRQRDMYRILLAQTTGVSFPTPGVSEEFSATSTPRRSPAVTPTVATPVQIT
KEESAEVIEAKAALKQLQEVFLTYKKEKAENDKILNEHNEKLQEQVTELRSQNTKISTQL
EFASRRYDMLQENLDRYRREIASFREKCQKMSSTTQQQEQMIHTLTQDLRAANEKLATAE
VRAENLRREKDMFKISESRLNQEKESLLAEQKGQNLLLTNLKSIQVTLERSETETKQRLN
NQIEKQEREIAQMKKKLEYEVEQKHLLSRNQDLQLLEVKKQLETQLSVHEKTKELLKNAE
KEIGTLKQQLSNAENQIASQALQGSASTVRQGAEVDIEDLQTRLRQSEEQNNDLKERLKT
ATNNVEQYRSMVLSLEDSLSKEKQVTEEARTVIETRLKESHDYQVQLEEKLVEAEKEKQE
LQEDKRKEIENLEQQVSELKKNLTSIQAELQEALQRAAIAASHEQKASQDSQQQAKLAAE
AQNKYERELMLHAADVEALQAAKKQAGQTSQMRQQLEDKAQKAEAQLKECQKSWDEREGI
LKEEVTKLASRCEDLLKQNNLLHEQIEALGNKMVASVQQAVQDSNLNISLNEEGKSQEQI
LEILRFVRREKEIAETKYEVAQVESLRYRQRVEHLEREQKELQDSLNAEREKMQVTTKTL
AQHEELMKKMENMNVLVETNKMLREEKERIEQEMQQAQAKVRKLEADILPLQESNAELSE
RSGMLQAEKKLLEEDVKRWKGRVQNLVSQQKDTDPEEYKKLHSEKEAHLKRIQQLTEETG
RLKTESARLHASITTGQRENQMLKDNLNKVSAEKEAVQKELDAKVLDIQEKTRTITQVKK
IGRRYKTQFEELKVQHDQMVEEAANRPAIEQEAQQASAQEIQGLKDALHQAESKVQELQE
EAENRKKIISDREAEIKDVQENVSKLQAELNTIKQELQEKSNLTEQLRQQITEKDEKTKK
AFMGAKQKIQHLMGTKDQLTKENEDLRAQKEEQEGRLNVLKSQYEGRICRLERELREQQE
RHHEQRDEPQEQPNKAQEQQRQAEQRQITLKSTPTSVDRGSTSALEPPTANIKPTPLVPT
PSKAAAIPGNKATPRASIRPMITPATVTTPTTTPTATVMPTTQVETQEAIQSEGPVEHVM
VFGSTSGSVRSTSPNVQTTLSQTILTVQQQQTQATAFVQPTQQSLPPVEPASQDPSPAIV
EVVQIERPSTSTAVFGTVSATPNASIPKRPREEGEENIPDNTETIQEDVADQPIPKKLRI
IQRVGPEEEIVVEDSPDVETEVQAESQEPQVPTQVVMEEDYTSIDSSQALQQTAPGDLIP
QLTEQQQTHIQDTLEEKQQDVIVIDTDSESEEEEEAEQEYEEEEEEDDEEDGEMGDEGEE
SNEGSGSGNGNEQFEGEEHEGVEIMDTGTENEESLETAEASHRTADPQNSGEGCVGTVES
TSETSREQHTLQPAASNTDRQAPRPPQSPRRPPHPLPPRLTIQAPAQELGPPSQRMPIRR
QSVGRGLQLTPGIVGSQHFFEDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVQRFRFG
PPEDMAQTSSSHSDLGQLASQGGLGLYETPLFLAAHEDESGGRSVPTTPLQVAAPVTVFT
ETHPSDVAENASQSVPMVTTSTGSSNEPGQGDEGEEVFIESEGPGTEASLDVESQPEAEE
PAQPSDDADLPSTSQDPPPATASTETTSTQPRNRVVIRHPQHARTDSRGRPVTQTAAITS
ISAGRRALGDVAVYSAQRCLLTHGRGTERRAGVGRAFGRRGRFNRGNMS
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttttgcagcagatactggaacgaaccgagctcaataaactaccaaaacct
gtccaaaacaaacttgagaagtttcttggtgaccagcaagtagagatcgatgcactcaaa
tcccgacacgagaggtttaaagtagatggcgaacagcagtattttgaggtagagaagagg
ttggctcaaagtcaagagaaacttttatcagaaaagcaggagcgtcagaatcttcaagaa
gaacttaaaaagctgaatgacgattgtaaggaattgaaggaaaaaaataaagagcatgag
gcaaataaggagaagttatcgacagagcaggcacaacttaagagggctaatgatgaattg
gcagatgaaaaacgagaacttacaaggaaactggaaaagaagtctcaggaacttgaacat
tacagtgaggacttgaaacgtttaaatgacaaacttgtagagaccagtactgcaaaagtt
gaacttcagttgaaacttgatgaactccaaacatcagaagtttctgttaagtaccgtgaa
aaacgaatggagcaggagaaagagttgctccaaaatcagaatgtttggttaaatgcagaa
ctcaaaaccaaaactgatgaactccttgccgtcactcgtgaaaaaggcaatgaaatctta
gaactgaaatgcagcttggagaataaaaaagatgaggtcacaagattagaagaacaagtg
aatagtcttaaatcttccaatgagagctttcagaagcagattgaggatttgatggccaaa
ttgaaggagtcaaaagagcagcaagcaagtatggaagaaagattccgtaatgaacttaat
gcacatattaagctttccaatttatataagagtgcggctgaagattctgagtctaaaagc
acagagttaaatagggcagttgaagaacttcacaagctgttgaaggaagcaggagaggca
aacaaagccactgaaagaaggatgaaggaattggaattgtgcaaagaagaaatggaagcg
gaactgaaagggaaaattaccagtctggaaaaagaacttgagaatgctaatgagctgctg
tctgcttctaagcgtaaaggggtgtctgtacttacagaggaggaattaactaccttatcc
cctacggcggcggctgtagcaaaaattgtgaaacctggaatgaaactgacagagctttac
aatgcatatgttgaaactcaggatcagttacttttagaaaaaatggagatgaaacgagtc
aacaaatacttggatgagattgtccaagaagtagaggccaaagcacccattcttaaacgg
cagcgagaagaatatgagcgaatgcagacatctgttgctagtctatctgcaaaactggaa
caggcaatgaaggaaattcacagactacagaaagaaactgatgaagcaaataaaagatca
tctgtgcttgagagagaaaaccagagatttgagttattggctgctgatctatctaaacag
atcagagtgctactaatggaactggaagaagcacgtggaaatcacgttattagagaagat
gaagaggtcagttctgcagatatcagcagctcatctgaagtaatttctcagcatttagtc
acctatcgtgacattcaggatctacagcaacaaaatcaacgtctcctagtggcacttcgg
gaacttggggaagccaaggagagagaagaacaagaaacaacatcatcaagggtttctgag
ctgcaagcagacttggacaaagctttaagtgagttagagcaactgaaggacagccgcaac
catcagatgcaactggttgaatccattgtacggcaaagagatatgtatcgtatacttttg
gcacagactactggggtttcatttcctactcccggtgtttcagaagaattttctgctact
tcgactcctcgtcgctctcctgctgtcacaccaacagtagcaactccagtgcagataaca
aaagaagaatccgctgaagtcatagaagcaaaagctgcattaaaacagttacaagaagtg
tttcttacatacaaaaaggagaaagctgaaaatgataaaattcttaatgagcataatgaa
aagcttcaggagcaagtcactgaactgcggtcccaaaacaccaaaatttctacacagcta
gaatttgcttctagacgttatgatatgttgcaagaaaatctggataggtaccgccgtgag
attgcatcattccgggaaaaatgtcaaaagatgtcatctactactcaacaacaggagcag
atgatccataccctaacgcaggacctaagagctgcaaatgaaaaactggcaacagctgaa
gttcgagctgaaaatctaagaagagaaaaggatatgtttaagataagtgagtcaagattg
aatcaagaaaaggagtcgttgttggctgaacagaaaggacagaacctccttctgaccaat
ctcaaatccatccaggtaacactggaacgctcagagactgaaacaaagcagagactcaat
aatcaaattgagaaacaagaaagagagattgctcaaatgaagaaaaaattagagtatgag
gtagagcagaaacatctcctaagtagaaatcaagatctacagctactagaagtgaagaaa
cagcttgaaacacagttatctgtgcatgagaaaaccaaggaactcttgaagaatgcagaa
aaggaaattggtactttaaagcaacagctgagtaatgcagagaatcagatagcatctcag
gcattgcaaggatctgccagtacagttcggcaaggtgcagaagtggatattgaagacttg
caaacacgactcagacaatcagaggaacaaaataatgatctgaaagagcgtctcaaaact
gctacaaataatgtggaacaatataggtctatggtgcttagtctagaggattctcttagc
aaagagaagcaggtgacagaagaagctagaactgttattgaaacacgtttgaaagaatct
catgattatcaagtgcagctggaggaaaaacttgttgaagctgagaaggaaaaacaagag
cttcaagaagacaagcgaaaagaaattgaaaatttagaacaacaggtatctgaacttaag
aaaaatttaacaagtattcaggcagaacttcaagaagcccttcaacgggcagcaatagct
gcatctcatgagcagaaggcctcacaggatagccagcaacaagcaaagttggctgctgaa
gcacaaaataaatatgagcgtgaattaatgttgcatgctgctgatgtggaggcattgcag
gctgcaaaaaaacaagcaggtcagacttctcagatgcgacaacagctggaagacaaagca
cagaaagccgaagctcagctgaaagagtgtcagaaatcttgggatgagcgagaaggaata
ctaaaggaagaagtgactaaactggcatcccgttgtgaagatttgctaaagcagaacaac
ttgctgcatgaacagatagaagcacttggtaataagatggtggcatctgtacagcaggct
gtacaggacagtaacttgaacatatcgcttaatgaagaaggaaagtcccaggagcagatc
ctggaaattcttcgatttgtgcgtagagaaaaagaaatagcagaaacaaaatatgaagtt
gctcaggttgagagtctgcgttaccgtcaaagagtggaacatctggagagagaacaaaaa
gaactgcaagacagtctgaatgcagagcgggaaaaaatgcaggtaacaacgaaaacactg
gctcagcatgaagaacttatgaagaagatggaaaacatgaatgttctggtggaaaccaat
aaaatgttgagagaagagaaagaaagaatagagcaagaaatgcagcaggcacaagctaag
gtacgcaaattagaagcagatattttgccactgcaggaatcaaatgctgaattaagtgag
cgaagtggtatgttgcaagcagagaagaaattgttagaagaagatgttaaacgttggaaa
ggacgtgttcagaatttagtcagccagcagaaagatactgacccagaagaatacaagaag
cttcattctgagaaggaagctcacttaaaacgcattcaacagctgacagaagaaactggt
agactcaagactgaaagtgcaagattacatgcaagcataacaacagggcaaagggagaac
cagatgctgaaagataatttgaataaggtgtctgcagagaaagaggcagtgcagaaagaa
cttgatgctaaggtacttgatatccaggagaaaacaaggacaatcactcaagtgaagaaa
attggacgaagatacaagactcaatttgaggaactcaaagtacaacatgatcagatggtt
gaagaagctgctaacaggcctgcaattgaacaggaggctcaacaagcatctgcccaagaa
attcaaggacttaaagacgcacttcaccaagctgaatccaaagttcaggagcttcaggaa
gaggcagaaaaccgtaagaagatcatcagtgatcgtgaagcagagataaaagatgtccag
gaaaatgtttctaaactgcaggcagagctgaacacaataaagcaagagctgcaggagaaa
tcgaaccttacagagcagcttcgtcagcaaatcactgagaaagatgagaaaacaaagaag
gcattcatgggagctaagcaaaagatacagcatctaatgggtaccaaagatcaattgaca
aaagagaatgaagatttacgagcacaaaaggaggagcaagaggggagattgaatgtttta
aagtctcagtatgagggacgaatttgtcgtttagagcgagagctaagagaacaacaagag
agacatcatgagcagcgagatgagccccaggaacaacccaataaggctcaagaacagcag
aggcaggctgaacagcgacagatcaccctgaaatccactcctacttctgttgatcgagga
agtacaagtgcattagaacccccaacagccaacataaagccaactcccctagttcctaca
ccaagcaaagctgcagcaattccaggaaacaaggccacaccacgtgcaagcattcggcca
atgatcacaccagcaactgttactactccaaccactacacctacagcaacggtaatgcct
acaactcaagtagaaactcaggaagccattcagtctgagggtccagtggagcatgttatg
gtgtttgggagtactagtggatcagtacgttctacaagcccaaatgtccagacaacattg
tcacaaacaatcttaactgtacagcagcagcagacacaagcaacagcttttgtgcagcca
actcagcaaagcctgcctccagttgagcctgccagtcaggatccatctcctgcgattgtg
gaagtggtgcagattgagaggccttctacatctactgctgtttttggcacagtttcagcc
acccccaatgcttcaatcccaaaaagaccacgtgaagaaggggaagagaatatacctgat
aacacagaaacaatccaggaagatgtggcagatcagcctatcccaaagaagctcagaatc
attcagagagttggccctgaggaagaaattgtggtggaagatagtcccgatgttgaaaca
gaggtccaggctgaaagccaagaaccccaagttcctacacaggtggtaatggaggaagat
tacacttcaatagatagcagccaggctttgcaacagactgctccaggtgacctcattccc
cagttaactgagcagcaacaaacacacattcaggacactttagaagagaagcaacaagat
gtgattgtgatagatacagattctgaatctgaagaggaggaggaagcagagcaggagtat
gaagaggaagaggaagaagacgacgaagaggatggagaaatgggggatgaaggtgaagaa
agcaatgagggtagtggaagtggtaatggaaatgaacaatttgaaggagaagaacatgag
ggagtggaaattatggacaccggaacagaaaatgaagaaagtttggaaaccgctgaagcc
agtcatagaacagcagaccctcaaaacagtggagaaggttgtgttggtacggttgaatca
acaagtgagacttccagagagcaacatactctacagccagctgcaagcaatacagataga
caagcacctcgtcctcctcagtccccaaggagaccaccgcatccgcttccaccacgactt
acaatacaggctcctgcacaggaactgggaccaccttcacagcgcatgccaattcgccgc
cagtctgtgggaagaggacttcaacttactcctgggattgttggttcgcaacattttttt
gaagatgatgaccgaatggtgccaagtactccaacgttggttgtgccccatagaactgat
ggctttgctgaggccattcattcccctcaggttgctggagttcaacggtttaggtttggt
ccaccagaagatatggcacagaccagctctagtcattcagatcttgggcagctggcttct
caaggaggactaggcttgtatgaaactcccctgttcctagcagctcatgaagacgaatca
gggggacgcagtgtaccaactacacctctgcaagttgcagctccagttacagtatttact
gaaactcatccctcagatgtggctgagaatgcctcacagtcagtaccgatggtcacaaca
tctacaggttccagtaatgagccaggccagggagatgaaggcgaagaagtatttatagag
tccgagggacctggtacagaagccagtctagatgtggagagccagcctgaagctgaagaa
cctgctcagccatctgatgatgctgatcttccttctactagccaggatcctcctccagca
actgcttctacagaaacaaccagcacacagcccagaaatagagtggtaattcgtcatcct
cagcatgcaaggacagacagtcgagggcggccagtaacgcagacggctgcgatcacaagc
atctcggctggccgcagagcattgggtgatgttgcagtctattcagcacaacgctgcttg
ctgacacatgggagaggaacggagaggagagcaggtgttgggcgtgcctttggaagaaga
ggacgtttcaatagaggaaatatgagctag
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integrated database retrieval system
