Polypterus senegalus (gray bichir): 120515176
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Entry
120515176 CDS
T08668
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120515176 (chd6)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120515176 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
CHDCT2
PSME4_C
Motif
Other DBs
NCBI-GeneID:
120515176
NCBI-ProteinID:
XP_039591862
LinkDB
All DBs
Position
14:6210159..6445872
Genome browser
AA seq
2549 aa
AA seq
DB search
MKILKKEKQMSASTVLKHTPSTVAIDQNAQSLFTRKQSDLHDQVRATELSSYFTSSTRHD
CTGEQMESVNLNLAKPANGVEDDGGGCRVKKKRKKKERNEPGSAANGASIKEIKPKKKRE
PKESKEPRKPKELKKSKELKQQKDPKKPRKPREAKLSKEKSMTGLNQKHKSRKNSKEQGP
TPVEKKKKGKRKNENSLDNLESDEGLSLTTNIPSTEDTNDSVDGQKRRSGRQVKRRKYNE
DLDFKVVDDDGETIAVLGTGRMPALSTSTLAWQAEEPPEDEANIIEKILSVRIVKKETSP
IELLNETEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKQAQMKHIFTEPDED
LFNPDYIEVDRVLEVAHTKDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPGKIKEFED
IKKIPENKPVDRPAADAWQKLEKSRDYKNGNELREYQLEGMNWLLFNWYNRKNCILADEM
GLGKTIQSITFLFEIFLMGLRGPFLIIAPLSTITNWEREFRTWTDMNVIVYHGSQISRQM
IQQYEMFYKDEQGITLPGIFKFHAIITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNC
KLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPNQFSSENTFLEEFGDLKTEEQV
KKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLAKGANQ
HNMPNLINTMMELRKCCNHPYLITGAEEKILEDFRKKHNPEAWDFQLQAMIQAAGKLVLI
DKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKA
DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI
TRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKKEVEDLLRKGAYGALMDEE
DEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAK
IAELEIESIDEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEDRPCRTRRLNER
NRRYMRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLAEKDMEVICRALLVYCVKHYKGD
EKIRSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKMKNQMSLPEIKNADWLANCN
PETVLCDDSYKKHLKQHCNKVLLRVRMLYYLKSEILGEAADKALEGISASKLDIVLPDID
YVEIPAHWWDAGADKSLLIGVHKHGKNTNVIYEVIISMDVDIGLSSSLPCSLDQTVFVEP
ITEERAARTLYRIELLRKVREQALRHPQLGERLKLCQPSLYLPVWWECGKHDRDLLLGVA
RHGLSRTDYYILNDPQLSFLEAHRNYVQKENKCQSAATTHCCLYKASISQQGSLVDYPCG
HTLMEPTGVIDDPLLDVVHTHKDPYMECSSIDDSMDLVSLHPDESLGAVDTLHNKSAKGA
TNGFPFKTDTGGQNMLNTYSVQNDVQGEMESVESKLQASADSSDPAHCDSDLMGASEDLD
EFQSQWESGQHSSGTDMFNESDAILSGQTLESEFLDSTHQDESRVDSSLADCMMIPNLGS
QSSTVDNLQTSFMLFKDLATSDQNGVLNDDHCVSGCLPHGVADAELHNDSASSPQENAGD
NGEKMSDSDVTHSVPSPCDGPERVNLDFEKEDLSQDDRSNAEVTEECIQQTEYCTCDVSS
NQTHQSLKNEPLLLPPALLDGEAESESKDNISEEKVPYLEAGMQKEKLVHLSPKQENLEE
IDGVLKEVKEAEGQTKGEENCEEEKYGSRCIQSNAAQEIREPTIAQLLQEKALYSFSEWP
KDRVIINRIDNICQAILKGKWPSSSQQFDSPTFVSTPGLQNNIAQRNTFLPSRMPSSTNL
SFNIGASVSHLAKDGLMGIPYLRDVKQAKRGFEFEPEVTSKLGRIEKIPIAITHASAPLV
LNGWQETAIDLSKAGDLNASPSQMHLSSGANKMGSISALQSTLGMDMAGILQAGLIHPVT
GQIVNGNLRRDDAVMRRRRGRRKNVEGVDLQFSKSQSFQEQNGDGDQKQGITGNVQPEKQ
NSTSHSPQAERSTVDRDVPNKSLLEWLRQNPNYSMEMHQFPHNVGILHGFAERPKQRRHR
CKDPSKLDVKSLTGEERVPVVHKGTGRRLGGAMAPAMKELSRWLDANTDYAVAPDWAEIV
RHSGFLPEGKFNRILTEPVSRDLGPRRRGRRPRSEIIKSAGIMADSSSTVGPLFMNGLIS
GMDLVSLQNLRNMQSIPLTGVMGFPHSFAAVSAGEDPKNSVNMLPMMLHSMATVQPHMFS
VSGLLNPMVTTAATTVTPTVTSTSESTANSSDSSSTETALTDKERPEESKKEDKASEEIS
NSSGTIPGTSNHPETTVTTTGTLAFNPFLIPGMSHGLLYPHMFLPHGISMALPGMQPASP
SDGSNTESPKRKKRKVKDECGTEITASTGHKAESATSPQITLENQTEASTKSGESESSCG
CEPERKQEEEGWDLHEGEVGNQIKGDVFH
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgaagaaagaaaagcagatgtctgcctcgactgtattaaagcacactcca
tcaacagttgccattgaccaaaatgcacagtcactatttacaagaaagcagtcagatctg
catgatcaagtaagggccactgaactttccagttatttcacatcttcaacaaggcacgat
tgcacaggtgagcaaatggaaagtgtaaacttaaacttggcaaaacctgcaaatggtgtt
gaggatgatggcggaggctgtcgagtaaaaaaaaagcgtaagaaaaaagaaaggaatgaa
cctggtagtgcagcaaatggagcaagcataaaagaaattaaaccaaagaagaagagagaa
cctaaggaaagtaaagaacccagaaagcccaaggagctaaaaaaatccaaggaactcaaa
caacaaaaagatccgaagaaaccaagaaagcctcgggaggccaagctatccaaggaaaag
tcaatgactggtttgaaccagaaacacaaaagtcgaaagaacagtaaagaacaaggccca
acaccagtggagaaaaagaagaaaggaaaaaggaaaaatgagaactctctggacaattta
gaatctgatgaaggactctccctgactacaaatatccccagtacagaagatacaaatgat
tctgtggacggacagaagaggcgatcaggcagacaagtgaagcgcaggaaatataatgag
gacctggacttcaaagtggtcgatgatgatggtgagacaattgctgtgcttggaacagga
aggatgccagcactttcaacatccacgctagcttggcaagcagaggaacccccagaagat
gaagctaacataatcgagaagatcctctctgttcgtattgtaaaaaaagagacgtcgccc
attgagctgctgaatgagactgaagagttttatgtgaagtacagaaacttttcttacctt
cactgtaaatgggcaactcttgaagaacttgagaaagatccaagaatacatcagaagatc
aaacgcttccgaaataagcaagcgcaaatgaaacacatatttactgagccggatgaagat
ctatttaatcctgactacattgaagtggaccgggttttagaagtagcccacacaaaggac
acagagactggtgaggaagttacacattatttggtgaagtggtgctccctgtcctatgaa
gaaagcacttgggagctgcaggaagatgtagatccaggaaaaattaaagaatttgaggat
atcaaaaagattccagaaaataagcctgtggatcgtccagctgcagatgcttggcaaaag
ttagaaaagtcacgagattataagaatgggaatgaactgcgagaatatcaactggaaggg
atgaactggcttttgttcaattggtataatagaaaaaactgtatcctggctgatgaaatg
gggttgggaaaaacaatccagtccatcacatttctgtttgagatttttctgatgggactt
cggggaccatttcttattattgctcctctgtctaccattacaaattgggagcgcgagttc
cgcacttggacagatatgaatgttattgtttaccatggaagccaaatcagcaggcagatg
atccagcagtatgaaatgttttataaggatgaacaggggatcactttgccaggcattttc
aagtttcatgcaattatcacaacttttgagatgattctcgctgactgtcctgaacttaag
aaaatccagtggcgttgtgtggttattgatgaggctcaccgtctgaagaaccgaaactgc
aagctgttagaaggattgaaactcatgaatttggaacacaaggtattacttactggaacc
cctttgcaaaactctgtggaggagctttttagccttttaaacttcctggaacccaatcag
ttttcttcagaaaacacctttcttgaggaatttggagatctaaaaacagaggagcaggta
aaaaagcttcaagctattcttaagcccatgatgctaagaagactaaaagatgatgtggag
aagaatcttgcaccgaaagaagagaccatcattgaggttgagctgaccaacattcaaaag
aagtactacagggcgatactggaaaagaactttacctttctggcaaagggagccaatcag
cacaatatgcccaacctcattaacacaatgatggagctgagaaagtgctgtaaccaccca
tacctgatcacgggtgctgaggagaaaattttagaggatttccgaaaaaaacacaaccca
gaggcctgggattttcaattgcaagcaatgatccaggcagctggaaaactggttttgata
gataaacttcttcccaagttaatagctggaggacacaaggtgcttgtcttctctcagatg
gtacgctgtctagatatcttggaggactacctcattcaaagaaggtatacctatgagcga
attgatggtagagttcgaggaaacctgcggcaagctgcaattgatcgattctgtaaagca
gactcagatcggtttgtgttcctgctgtgcactagagctggaggcctgggtattaactta
actgctgctgatacatgtatcatttttgattcagactggaacccacagaatgatctgcag
gctcaggctcgctgtcacagaataggtcagagtaaagcagtcaaggtttatcgtttgatc
acacgtaactcctatgagagagagatgttcgacaaggccagtctaaagctgggtctggat
aaagctgtactgcaggacattaacaggaaaggcagcactaatggggttcaacagctttct
aagaaggaagtagaagatcttttacggaaaggggcatatggagcacttatggatgaggaa
gatgagggttccaagttctgtgaggaagatattgaccaaatcttgcaacgcaggacgcaa
acaattaccatccagtcagaagggaaaggttctacttttgccaaggcaagctttgtatct
tctggaaacagaacagacatatctttggacgatcctaatttctggcagaagtgggcaaaa
attgcagaactggaaattgagtctattgatgaaaaggagagcttagtgattgacacacct
cgtgtaaggaagcaaactagacattataactcattcgaggatgatgagttgatggagttc
tcagagctggatagtgactctgaagacaggccttgtcgtacccgacgtctaaatgaacga
aaccgacgctacatgcgagcagagtgctttagggtggagaagaatttgctcatatttggc
tggggccgctggaaggacatccttacacatggcagatttaagtggcacttggcagagaaa
gacatggaagtaatatgtagagcacttctagtatattgcgtgaagcattataaaggagat
gagaaaattcgaagtttcatctgggatctcattacacctactaaggatggccagaaccaa
gctttgcagaaccattcaggtctgtctgctccagttccacgagggcgtaaagggaaaaag
atgaagaaccagatgtcacttcctgaaataaagaatgctgactggttagcaaactgcaat
cctgagactgtactctgtgatgatagctacaagaaacatctgaagcagcactgtaacaag
gttttacttagagtcagaatgctttattacttgaagtcagaaatacttggggaggcagca
gacaaagcattagaaggcatttctgcaagtaaactagatatcgttctcccagatattgac
tacgtggagattccagcacactggtgggatgcaggcgctgacaagtcgttattaattggt
gtccacaaacatggtaaaaatacaaatgtgatttatgaagtaattataagcatggatgtc
gacattggtttatcctcatctttgccatgttcacttgaccagacagtttttgtggagcct
ataacagaggaacgtgctgctagaacactatatcgtattgagctgctgcggaaggttcgg
gagcaggcgctgagacaccctcagctgggtgagcgtcttaaattgtgccagcccagtttg
tacctcccagtttggtgggagtgtggcaagcatgaccgagacctcctccttggtgttgcc
agacatggtctcagtcgcacagactactacatccttaatgacccccagctttcctttttg
gaggcacataggaattatgtccagaaggagaataagtgtcagtctgcggctacaacccat
tgctgcctgtataaagccagtatcagtcagcaaggatctctggtagactatccatgtggt
cataccctgatggaacctactggggtcattgatgatcctttattagatgttgtacatact
cataaagatccatatatggagtgcagctccatcgatgactccatggaccttgtttctctt
catccagatgagagcttaggagcagtggacactttacacaacaaatctgcaaaaggtgct
actaatggcttccctttcaagactgacactggtggccagaacatgttaaatacgtacagc
gtacagaatgatgtacaaggtgaaatggagtcagttgagagtaaattacaggcttctgca
gatagcagtgatccagcccactgtgactctgatttgatgggtgcttctgaggacctagat
gagtttcaaagccagtgggaaagtggccagcattctagtggcactgatatgtttaatgag
tctgatgctatcttaagtggacagaccttggaaagcgaattcttggattccactcatcag
gatgagtccagagtggacagcagcttggctgactgcatgatgataccaaacctgggttca
cagagtagcactgtggataatttacagacgagtttcatgttgtttaaggaccttgccact
tcagatcaaaatggagtcttgaatgatgaccattgtgtgtcaggatgcctgccacatggt
gtggctgatgcagaattacataatgacagtgcaagcagcccacaggagaatgctggtgat
aatggggaaaagatgagtgattcagatgttactcatagtgtcccaagcccatgtgacgga
ccagagagagtaaacttggattttgaaaaagaagatctttctcaagatgatcgaagtaat
gcagaagtcacagaagaatgcatacagcagactgagtactgtacctgtgatgttagcagc
aatcaaactcatcagagtctaaaaaatgaaccattgttgctgccacctgctctgttagat
ggggaagcagaaagtgagtccaaggacaatatatcagaggagaaagtgccatatttagag
gcaggaatgcagaaagagaaacttgtgcatttatcacctaagcaagaaaacctagaggag
attgatggagtgctgaaagaagtcaaggaggccgaaggtcagactaaaggggaggaaaac
tgcgaagaagagaaatatgggagcaggtgtatccaaagcaatgctgctcaggaaattcga
gagcccactattgcacagctgctacaggaaaaagcactttactccttttcagagtggcca
aaggatagagtaataataaatcggattgataacatctgtcaagccatcttgaaaggaaaa
tggccgtcttctagtcagcagtttgactcgcctaccttcgtttccactccgggtttgcaa
aacaacattgctcagaggaacactttccttccttctcggatgccatcaagcacaaatctc
agctttaatattggagcatctgtttcccacctggctaaggatggattgatgggcattccc
tacttgcgggatgtaaaacaagccaaacggggatttgaatttgaaccagaagtcacctcc
aagttaggcaggattgaaaaaattcctattgctattactcacgccagtgctccattggtt
ctaaatggttggcaggagactgctatagacctgtcgaaagctggggaccttaatgcaagc
ccttcccaaatgcacctcagcagtggagcaaataaaatgggttccatcagtgcactccag
agcacacttgggatggacatggctggcatcctgcaagcagggcttattcacccggtgact
ggacagattgtcaacggtaacctgcggcgggatgatgctgtcatgaggagaaggcgtggg
cgtcggaagaatgtagaaggtgtggacctccagttttctaaaagccaaagctttcaggag
cagaatggagatggtgatcaaaagcagggcataactggaaatgttcaaccagaaaagcaa
aactccactagccattctcctcaggctgagagaagcacagttgacagagatgtacctaat
aaaagcttgttggaatggctaaggcagaacccaaactatagtatggagatgcatcaattc
cctcataatgttgggattctacatggatttgcagagcggccaaaacagagaagacatcgt
tgcaaagatcccagcaagttagatgtaaaatctttgactggagaagaaagagtccctgtg
gttcataaaggaaccggaagaaggttgggaggagcaatggccccagcaatgaaagagctc
tctcggtggcttgatgcaaacactgattatgctgtggctccagactgggcagagattgtc
cggcactcgggtttcttaccagaagggaagttcaacagaattctcacagagccagtgtcc
agggacttgggtccaaggagacgtggtaggcgtccacgaagcgaaataatcaaatcagct
ggaataatggcagattcttcatctacagtgggtcctttattcatgaatggactcatcagt
ggcatggatttggtgagccttcagaacctgaggaacatgcagagcattcctctgactgga
gttatggggtttcctcatagctttgctgcagtttcagcaggggaggatcccaaaaacagt
gtaaacatgttgcctatgatgctacacagtatggcaactgttcagccacacatgtttagt
gttagcggactgctgaacccaatggtgacaacagcagcaaccactgtaacaccaacagta
acctctacatcggagagcacagccaacagtagtgactcctccagtacagagacagcattg
acagacaaggagagaccagaagagtcaaaaaaagaagataaagcatctgaggaaatttcg
aacagctctggtaccatccctgggacaagcaatcaccccgaaaccacagtaaccacaact
ggcactttagcatttaatccctttctgatcccaggaatgtcccatggactgttgtatccg
cacatgttccttcctcatggtatcagtatggcactacctgggatgcagcctgcaagtccc
tcagatggttccaacacagaaagccccaagcgcaaaaagaggaaagtcaaagacgagtgt
gggacagagattactgccagcactggacataaggctgaaagtgctacatcacctcaaata
actctggaaaatcagactgaagccagcacaaagtctggcgaatcagaatcctcttgtggg
tgtgagccagaaagaaagcaggaagaagaggggtgggatttgcatgaaggggaagtggga
aatcaaattaaaggtgatgtgttccattag
DBGET
integrated database retrieval system
