Polypterus senegalus (gray bichir): 120515240
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Entry
120515240 CDS
T08668
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120515240 (notch2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
EGF_3
Ank_3
NODP
Ank_4
Ank_5
cEGF
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
120515240
NCBI-ProteinID:
XP_039591994
LinkDB
All DBs
Position
14:145982853..146021805
Genome browser
AA seq
2365 aa
AA seq
DB search
MNHPGLLLGHFSLLLSSIWLAVGLQCRDGVCPYGKCVTYDNGTSECRCEPGSLGENCKLR
DPCSPDFCQNGGSCSSVEVKGTVKTTCSCTSGFTGRYCESRVNAPCDPGQPCKLEDPCLS
QPCLNNGACSAASGGRFTCACLDGYTGERCEVDRDECATGVTCRNKGTCVNLPGSYTCQC
PPGFTGRRCEEIFTSCSPSPCMNGGTCRSTGALSYECHCLPGFNGTDCEINIDDCVQHHC
KNGGTCVDGPNTYNCQCPPHWTGQLCDEDVDECKLQPNACQNGGTCHNEDGGHSCVCVNG
WIGDDCSINFDDCAEASCTEGSTCIDRVASFYCICPPGKTGLLCHLDDACYSNPCQTGAM
CDTNPVNGKYICTCPNGYKGTACNEDIDECALGDNPCEHGGRCMNTQGSFRCECSKGYTG
PRCEIDINECSAMPCKNEATCLDQIGKFTCICMPGFTGVFCDVDINECDSNPCLNNGECE
NQVDQFVCHCPPGFSGAVCQVDVDECVSTPCHNGAKCLDRPNGYECICAEGYTGLLCEEN
INDCEPKQCHHGRCVDGISTFTCVCDPGYMGPICSEPVNECLSQPCQNGARCVDLVNMYQ
CNCLLGTSGVNCENNFDDCASNPCDFGICKDGINSYECVCSPGYTGPKCTDNVDECASHP
CQNGGTCVDELNAFHCICPEGYHGPVCYSEMYNCDSNPCVHGQCLDDENGYKCQCEPGYT
GENCELQRNECNSNPCRNGGTCADLLNGFKCACASGFTGVTCQSDIDECVSNPCLHQGTC
LNEMNRYTCICSVRYTGLNCEKSLAPCDPNPCENSGVCKESADFLHYVCQCPPGWTGSRC
SLDADECNSKPCLNGAQCYNTQGSYKCQCRSGYTGNNCQVNIDDCSPNPCQNGGSCRDGI
GHFMCSCLPGFSGDQCQLEVDECESHPCQNGGTCSDYVNSYACKCAAGFSGIQCENEVDE
CTESSCLNSGTCVDGINSFHCLCPAGFFGSVCQNEINECESQPCKNGATCIDRLGTYHCN
CLAGYTGSNCQTLVNLCSSSLCKNGGRCVQKGTFIRCDCPSGWVGTYCDVPMVSCQEVAL
KKGISVESVCNLHGTCSNVGNSHRCHCHIGYTGSYCEVEIDECASNPCQNNARCRDYHAS
YVCECLPGFQGVNCEFEINECQSQPCKNGGTCFDQLDHFMCSCPTGTRGVLCEENIDDCA
PDVSGPRCLNGGRCVDGIGGYTCACSPGFAGDHCEGDVNECLSNPCDPSGSQDCVQLDND
YKCHCRDGYTGRHCESREEPCSVNRCHNGGQCKTISSPPGYSCRCPPGFFGNTCADSNIS
CHLRCQNNGYCVVTKSGAKCMCSRGFEGASCEISACSRQPCLNGATCFPVSYEPYYKCRC
PADFEGQNCEAHQTCPFSECSNKAGDSWCDKNCNIWECQWDGGDCSLHWKDPWQNCSLAL
RCWELFNNNVCDEQCNTAPCLFDNFQCVKNGKVCKYDRYCADHFANSVCDQGCNTEACGW
DGLDCAVDTPEHLAEGTLIIVVLLQPSELEKDLTQFLRTLGTLLHTNLRVKKDSTGKAMI
FPYYRQDGGHASNTARRSRELNKEVIGSTVHLQIDNRQCLQSSKDCFSTTDDAAVFVASQ
AIIDRLPYPVLKVSSDHSGIFNPKTHFLYLLAVALLIILVILALGVIVAKRKRKHGALWF
PEGFLPKKDRKRRDPVGQDDFGLKNIAKVPCNLSTVDGSSSTRWMDETSDPGKLKTEGQA
LLSETEAAVDRRQWTQQHLEAADIPVTPSLAPTPPRAEKEVTCVDVNVRGPDGFTPLMLA
SLRQGGSQAITDEEEDSEDASSNVIIDLINQGATLMAQTDRTGETALHLAARYARADAAK
RLIDAGADVNAQDNMGRTALHSAVAADAQGVFQILTRNRATDLDARMNDGTTPLILAARL
AVEGLVEELIGCHADVNAVDDHGKSALHWAAAVNNVEATVALLKNGANRDMQDNKEETPL
FLAAREGSYEAAQTLLDHFANRDITDHMDRLPRDIAQERMHHDIVQLLDEYNLVQSPHGT
GGHGMGSTLSPIVCGPNGSFVSMHQASQGKKPRRNNPKGPGNIQSLTKDAKGRRRKKCPG
EKKGRLSESSVTLSPVDSLESPHAYFSDSTSPPLLTSPTTPLHAVPLVYAQGTGTILPPV
SHMLSQGGALTPSLPRCSPEWMGRPKSTFGPMFGVLHQHPSMLQQGSMATPVNMSVAREP
LPPIVTFQMMPSTSSQPQAQRRLVQQSAEGHCALGMYQSTEMSHPGSLVPQQSFQSSVDK
YPTPPSQHSYVSTSDGSPNQNKPATSEHPYLTPSPESPDQWSSSSPHSTSDWSDVPTTSP
TPLGQRQPGVLHIPEQQRNGMQVFA
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcccgggctgcttttggggcacttttcgctgcttttaagctcgatctggctg
gcggtcggtctgcagtgtcgtgatggcgtgtgcccctatggtaaatgcgtcacctatgac
aatggcactagcgaatgcaggtgtgagccaggaagtctgggagaaaactgcaaactcaga
gacccctgcagtcctgacttctgccagaatggcggcagctgctcatcagttgaagtgaag
ggtaccgtgaagaccacctgcagctgtacttcgggattcacagggcgctactgtgagagc
cgcgtgaatgccccctgtgacccaggtcaaccgtgtaaattggaggacccctgcttatct
cagccttgcttgaacaacggcgcttgttctgctgcttctgggggacgcttcacttgcgcc
tgtcttgacggctacaccggggagcgctgcgaggtggaccgcgatgaatgtgctaccgga
gtgacctgccgcaacaagggcacctgtgtcaacttgccggggtcttacacgtgtcagtgc
ccccctggtttcacagggagacgctgtgaggaaatcttcacatcctgctccccttcacct
tgcatgaacggtgggacgtgccgctccactggcgccctctcctacgagtgccactgcctc
ccaggttttaatggaacagactgtgaaatcaacattgatgactgcgtgcagcaccattgc
aaaaatggtggtacctgtgttgatggaccgaatacatacaactgtcagtgtccaccacat
tggacaggccagctctgtgatgaggatgtggatgagtgcaagctgcagcccaacgcttgt
caaaacgggggcacatgccacaatgaagatggtgggcacagctgtgtctgtgtcaatggc
tggattggtgatgactgcagcataaattttgacgattgtgccgaggcctcctgcacagaa
gggtctacgtgcattgatagagtggcgtctttctactgcatctgtccacccggaaaaaca
ggactgctgtgtcatttggatgatgcctgctacagcaacccctgccagactggggcgatg
tgtgacaccaacccggtcaatggcaaatatatctgcacctgccccaatgggtacaagggc
acagcctgcaatgaagacattgacgagtgtgcgttgggcgataacccctgtgagcacggc
ggtcgctgcatgaacacccagggctcgttccgctgcgagtgttccaagggctacactgga
ccacgatgtgaaatcgacatcaacgagtgttcagcaatgccctgtaagaatgaagccacc
tgcttggaccagattggcaagttcacctgcatctgcatgccaggattcaccggagtcttc
tgtgacgttgacattaacgagtgtgatagcaacccctgtctgaataatggcgagtgtgag
aaccaggtggaccagtttgtttgccactgccctcctggtttcagtggagctgtttgccag
gtcgatgttgatgaatgtgtcagcacaccgtgccacaatggtgccaaatgtctggacaga
cccaatggatatgaatgcatctgcgctgaaggctacactggtctgctgtgtgaggagaac
atcaatgactgtgaacccaagcagtgtcaccatgggcgctgtgtggatggcattagcacc
tttacttgtgtgtgtgaccccggctacatgggccccatatgcagtgagccggtcaacgag
tgtctgagccagccctgtcagaatggggcacgctgtgttgacttagtcaacatgtaccag
tgcaactgcttgctgggtacctcgggggtcaactgcgaaaacaactttgatgattgcgcc
agcaacccatgtgactttggcatctgcaaagacggcatcaacagctatgaatgtgtctgc
tccccagggtatacaggtcccaagtgcaccgacaatgttgatgagtgtgcctcacatcca
tgtcagaatggtggcacctgcgtggatgagctcaatgcattccattgcatttgccccgaa
ggctaccatggccctgtgtgttactctgaaatgtacaactgtgacagcaacccctgtgtc
catggccagtgtctggatgatgaaaatgggtataagtgccagtgtgagcctgggtacact
ggagagaactgtgagctgcagcgcaacgagtgtaactcaaacccatgtcgcaatggaggc
acctgtgcagacctcctcaatggcttcaaatgtgcttgtgcaagtggattcacaggtgtc
acctgccagagcgacatcgatgagtgcgtttcaaatccctgcctccaccagggcacctgc
ctcaatgagatgaacagatacacctgcatctgctctgtgcgttacacaggcctgaactgt
gaaaaatctttggctccctgtgacccgaacccctgtgagaattctggtgtctgcaaagag
tccgccgacttcttacactatgtgtgccagtgtccacccggctggacgggttcccgatgc
tctctagacgcggatgagtgtaattctaaaccctgtctgaacggagcccagtgttacaac
actcaagggtcttacaaatgccagtgccgctctggttatacagggaacaactgccaagtc
aacattgacgactgctctccaaacccatgccagaatggcggttcttgcagggatgggatt
ggtcacttcatgtgttcgtgtctgccgggtttcagtggtgaccagtgtcagctggaagtt
gatgaatgtgagagtcatccatgtcagaatggaggcacatgtagcgactatgtcaacagc
tacgcatgcaagtgtgcagctggattcagtggcatccagtgtgagaatgaggtggacgag
tgcactgagagctcttgtctcaatagtggaacttgtgtggatggcatcaactcattccac
tgcctctgcccggctggattctttggctctgtctgtcagaatgagatcaatgagtgtgaa
tcccagccctgcaaaaatggggctacctgcattgacagattgggaacctatcattgcaac
tgtctggcaggttacacgggcagcaactgccagaccttggtaaacctgtgtagctcgtct
ttatgcaagaatggtgggagatgtgtgcaaaagggtacctttatacggtgcgattgcccc
agtggctgggtaggcacctactgtgatgtgcccatggtgtcgtgtcaggaagtggcatta
aagaaagggatcagtgtggagagtgtgtgcaatctgcatgggacttgcagcaatgtggga
aacagccacagatgccattgccacattgggtacactggcagctactgcgaggtggagata
gacgagtgtgcttctaacccctgccagaacaatgctcgctgcagggactaccatgccagc
tatgtatgtgagtgtttgcctggcttccagggagtcaactgtgaatttgagattaatgag
tgccagtcccagccctgcaaaaatggtggcacatgctttgatcagctggaccacttcatg
tgctcttgcccaactggaacacgaggggttttgtgtgaggagaacattgatgactgtgca
ccagatgtctctggccctcgctgcttgaatggtggccggtgtgtcgatggcatcggaggt
tacacctgtgcctgctcgccaggctttgctggtgaccactgtgagggggatgtgaatgag
tgcttatctaacccttgtgatcccagtggcagccaggactgcgtgcagttagacaatgac
tacaagtgtcattgtcgagacggctatacaggtcgtcactgtgaatcaagagaagaaccg
tgctctgtaaaccgctgccacaatggtggccagtgcaaaacaattagcagcccaccaggc
tacagctgcaggtgcccaccgggattctttgggaacacctgtgccgacagcaacatctcc
tgccacctccgctgtcagaacaatggctactgtgtggtgaccaagtctggtgcaaagtgc
atgtgctcccggggctttgagggtgcctcctgtgaaatcagtgcctgcagcagacagcca
tgcttgaacggggccacttgctttcctgtttcatatgagccatactataagtgcaggtgc
ccggcggacttcgaagggcagaattgtgaggcacaccagacctgccctttttcagagtgc
agtaacaaagcaggggacagctggtgtgacaaaaactgcaacatctgggagtgccagtgg
gatggtggcgattgctcacttcactggaaggacccttggcagaactgttcactggccctg
cgctgctgggagctcttcaacaacaatgtttgtgacgaacagtgcaacacggccccctgc
ctttttgacaacttccagtgtgtgaagaatgggaaggtgtgcaagtacgaccgttactgt
gctgaccacttcgctaatagcgtgtgcgatcagggctgcaacacagaggcctgtggctgg
gatggcctggactgtgcagttgacacaccggagcacctggctgagggcacattgatcatt
gtggtgttactgcaacctagcgagcttgagaaggacctgacccagtttttacgaaccctg
ggtactctgttgcacaccaatttgcgtgtcaagaaagattccactgggaaggccatgatt
tttccgtattatcggcaggatggtggccatgcgagcaacacggcgaggagaagccgtgag
ttgaacaaggaggttatcggctccaccgttcacttacagattgataatcgccaatgtctc
cagagctccaaggactgcttctccaccactgatgatgctgctgtgtttgtggcctcccag
gccatcatcgacagacttccatacccagtgcttaaagtgtcaagtgatcacagtggcatc
tttaacccgaagacgcatttcttgtacctcttggcggtcgctctgctcattatactggtg
attcttgcactgggagtcattgtagctaagaggaagcgtaagcatggagcgctgtggttt
ccagagggattcctaccaaagaaagaccggaagcggagagatcccgttggccaggatgac
tttggattgaaaaacattgctaaagtcccctgtaacctgagcactgtagatggcagctca
agcacccgctggatggatgagacatctgatcctggcaagttaaagactgaaggccaggcc
ttgctctccgagactgaggcagcagtggacaggcgccagtggacacaacaacatttggag
gccgctgatattccagttacaccatccttggccccaacaccacctcgggcagagaaagaa
gtgacctgtgtggacgtcaatgtcagaggaccagatggattcacgcccctcatgctggct
tctctgaggcaaggtggttctcaagccatcaccgatgaggaagaagacagtgaagatgca
tctagcaacgtcatcatagacttgatcaaccagggagctaccctaatggcacagactgat
cgcaccggcgagacggcattacaccttgcagcgcgctacgccagagctgacgctgccaag
cgcctgattgatgctggtgctgacgtgaatgcgcaggacaatatggggcgcaccgcgctc
cactcagcagtggcagctgatgcccagggagtctttcagatcctcacccggaatcgggcc
accgacctggacgcacgcatgaatgacggcaccactcccttgatcctcgccgcgcgcctc
gctgtggagggcttggtggaggagctcatcggctgccatgcagatgttaatgcagtggat
gaccacggcaagtcagctctgcactgggcagctgctgtcaacaacgtggaggcaactgtg
gctctgctgaagaatggcgctaaccgtgacatgcaggacaacaaggaggagacccctctg
ttcctggccgctcgggagggcagttatgaagctgcccagactctgctggatcactttgcc
aatcgtgacatcacagaccacatggaccggctgccacgggacattgcccaggagcgcatg
caccatgacatcgtgcagctgttggacgagtataacctggtgcagagccctcacggcact
ggaggccatggcatgggctccaccttgtctcccatcgtgtgtggtcccaatggctccttt
gtctccatgcaccaggcctctcagggcaagaagcctagaagaaataaccccaaagggcct
ggcaacatccagagcttgaccaaagatgccaaagggcggcgccgcaagaaatgcccagga
gagaagaagggccgcctgtcagagagctctgtcaccctttccccggtagactccctcgag
tccccacatgcctacttctcagacagcacttcgccacctctgctaacctctcctaccacc
cccttgcatgctgtgcccctggtgtatgcccagggtacgggcacaatcctaccccctgtc
agccacatgctctcccaaggtggggccttgactccgtctttgccacggtgctcgcccgag
tggatgggcagacccaagtccactttcggccctatgtttggtgtcctgcatcagcatccc
agtatgctccagcagggcagcatggcgactcccgtcaatatgagcgtcgccagggaaccg
ctaccccccatcgtcacctttcagatgatgcccagcaccagcagccagccgcaggcacag
cgacggctcgtacagcaatccgcggagggccactgtgcccttggcatgtatcagagcacg
gagatgagccaccctggcagcttggtgccccagcagagcttccagagctcggtagacaag
tacccaacccctccgtctcagcacagctacgtgtctacctctgatggctcccctaatcag
aacaagcccgccaccagcgagcacccctacctgaccccatccccagaatcgcctgaccag
tggtccagctcctcccctcactccacctctgactggtcggatgtccccacgacgagcccc
acacctctggggcagcgccagcctggcgtcctgcacattcctgagcagcagaggaatggc
atgcaggtttttgcatga
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integrated database retrieval system
