Polypterus senegalus (gray bichir): 120515553
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Entry
120515553 CDS
T08668
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120515553 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120515553 (rad54b)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120515553 (rad54b)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
120515553
NCBI-ProteinID:
XP_039592559
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Position
15:89789740..89937237
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AA seq
943 aa
AA seq
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MLNACKVMCRKVEIKTSRMRRSAAPSQLAGNAAKKQRFIPPAILNSKFESELMPLKKTLV
AQPHPDADSSLVRTESSRTLNSPSGLTNVSHLDGNSAGYCKEEGKGIDSGSFVDDELKIT
KNPEITGKFLIKNTFNSPTIQSSILERHNMEAPVPKFFRVVWCKASRKKHKKWEGDGVLI
TKGRSAILKDLEGKDIGRGTGYKSAILESLTESHTLMVGGKEVEVMGVILPEDFKSGRCF
LTVPTETSVLPDENVHQVIHKPFSNPLKNLSKEICQPQKTRDIGCKPRHSPDSPGALVMP
RPNLNHQLQYNKLGLPVVDVVVDPYLSSHLRQHQRDGIIFLYECMLGMRVSGRFGAILAD
EMGLGKTLQCISLIWTLLRQGPYGAKPVIKRVLIVTPGSLVKNWSREFQKWLGKERINVF
AVDQDHKIEEFISSPLYPILLISYEMMLRCLEQIMTVSFSLIICDEGHRLKNSNIKTSYA
LTSMPCERRIILTGTPVQNDLQEFYAIIEFVNPGILGSSSTYRKIYEEPILKSRQPSATT
EERSLGNERASELVRITGFFTLRRTQEIINSYLPPKVEWVLFCQPSPLQLEVYRALLASH
TVRSLLQGVLENSPHFVCIGALKKLCNHPALLYTTIKEKEAYPNLDCESTLYEGLSDLFP
EEYMNGGYKTIDSGKLHVLLDLLLAIRDLSPTERVVLVSNYTQTLDMLENICKEFGYNYS
RLDGQTPVSQRQQIVENFNSKYTTDFVFLLSSKAGGVGLNLVGASHLILYDIDWNPANDI
QAMARVWRDGQKNTVHIYRFLTTGTIEEKMYQRQVSKQGLSGTVVDMTKKTDHTTFSAED
LQNLFMLHCDSECITHDLLNCKCESGENSKASSTVVKPVIQRRCQLGWDSESSQKLLSMS
ELMQWKHFSGTTASFTDPFVERVRKQITFAFQNKTEPKMFMDQ
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatgcgtgtaaagtgatgtgccgtaaagtagaaattaaaacatcaagaatgagg
aggtcagccgctccaagtcagttggcaggaaatgcagcaaaaaagcaaaggtttattcct
cctgcaatactaaactcaaagtttgaatctgaactgatgccacttaaaaaaactctcgtt
gcacagcctcatcctgatgctgacagctctttggtaaggacagagtcatccaggaccctt
aattctccttccggtttaaccaatgtgagccatttagatggtaattctgctggatattgc
aaagaagaaggaaagggaattgattcagggtcttttgtggatgatgaactcaaaattaca
aaaaatccagagattactggcaaattcctaattaagaatacatttaatagccccacaata
caaagtagcattctcgaaagacacaatatggaggcacctgtccccaagttcttcagagtt
gtatggtgtaaagcatcaaggaaaaagcataagaaatgggaaggagatggagttttaata
accaaaggaaggtctgctattttgaaggatttagaaggcaaggacattggaagagggact
ggatacaaatctgcaatattagaaagccttactgaaagtcatactttgatggttggtggg
aaggaggtagaagtcatgggtgttatattaccagaagattttaaaagtggccgatgcttt
cttacagttcccactgaaacaagtgttcttcctgatgaaaatgttcatcaggtaatacat
aaaccattctctaatcctctgaaaaatctgtccaaggaaatttgccaaccacagaagact
agagacataggctgcaagccacgccatagtcccgattcccctggtgcattagtcatgcca
cgacctaacttaaaccatcaactgcaatataacaaattgggattgccagtagtagatgtg
gttgtggatccttatctttcttcccatctaagacaacatcaaagagatggcataatcttt
ctttatgaatgcatgctgggtatgagagtaagtggaaggtttggtgcaattcttgctgat
gaaatgggactgggcaagactttgcagtgtatttctcttatatggacactccttcgccaa
ggtccttatggtgcaaaaccagtcattaagcgtgtacttattgtgacaccaggaagtctt
gtgaaaaattggagtagagagtttcagaagtggctggggaaagagcgtatcaatgtgttt
gcagtggatcaggaccacaaaattgaagaatttatcagttctccattataccccatccta
ctaattagctatgaaatgatgctacgatgtttagagcaaataatgactgtcagcttcagc
ttgatcatttgcgatgaaggacaccgtttgaagaatagtaatatcaaaacatcgtatgca
cttactagcatgccttgtgaaaggaggataattcttacaggaactccagttcagaatgat
ctgcaagaattctatgctataattgaatttgttaacccaggcattcttgggtcttccagt
acctacagaaaaatttatgaagaacctattctgaagtctcgacaaccatcagcaactacg
gaggaaaggagccttggcaatgaaagggcttcagagctcgtacgcatcacaggattcttt
acattacgccggacacaagagataattaatagctatctgcctcccaaagtggaatgggta
ttgttttgtcaaccttctccattacagttggaagtctaccgagcactgctggcatcccat
actgtcagatccttacttcagggtgttcttgagaacagtccacatttcgtctgtattggg
gcacttaaaaagctatgcaatcatcctgctttgctttatactaccataaaggaaaaagaa
gcatatcctaatttggattgtgaaagcacactgtatgagggtttgtctgacctttttcca
gaagaatatatgaatggtggatacaaaaccattgacagcggcaagctacatgtactacta
gatctccttcttgctattcgagatttgagccccacagaaagagttgtacttgtatcaaat
tacactcaaactctggacatgctggagaacatttgcaaagaatttggttacaactactca
cgcttggatggacaaacaccggtgtctcaaagacaacaaattgttgaaaatttcaacagc
aaatataccactgattttgtgtttctactgagctcaaaagcaggtggcgttgggttaaat
ctagttggagcatcacatttgatactatatgatattgactggaatcctgccaatgacatt
caggcaatggccagagtttggagagacggacaaaagaatacagttcacatttaccgtttt
ctaacaacaggtacaattgaagaaaagatgtatcagaggcaagtaagtaaacagggcctc
tctggaactgttgtggacatgacgaaaaagacagatcacactactttttctgcagaagac
ctccaaaatctttttatgcttcactgtgactcagaatgcataacgcatgacttactcaac
tgcaaatgtgaatcaggagaaaattccaaagcatcatctacagttgtaaaaccagtgata
cagagaagatgtcagttgggttgggattctgaatcttcacagaaacttctgtcaatgtca
gaactcatgcagtggaaacacttctcaggaacaactgccagcttcacagatccttttgtt
gaaagggttagaaaacaaataacattcgcttttcaaaataagacagaacctaaaatgttt
atggaccaatag
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