Polypterus senegalus (gray bichir): 120515645
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Entry
120515645 CDS
T08668
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120515645
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120515645
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120515645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
Ank_2
Ank
IBR_2
Ank_4
Ank_5
UBA_ARI1
Ank_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120515645
NCBI-ProteinID:
XP_039592786
LinkDB
All DBs
Position
15:74397803..74843305
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AA seq
1122 aa
AA seq
DB search
MGNTATKFRKALINGDEALAYQLYESNPQFKESLDPNTSYGEPYQHNTPLHYAAKHAMTR
LLRAFLYSKDGNPNKRNIHNETSMHLICMGPQIMLPEGALHPRISRPYEDEQKRADCLQM
TLKWTGAKLDQGEYERADVNAVDNKKSTCLHYAAASGMKSCVEYLVKSNADLFCENEDKD
TPCDCAEKQHHKELALNLESQMVFSRDPEADDIEAEYAALDRREPYEGLRPQDLRRLKDM
LIVETADMLQTPLFTAEALLRAHDWDREKLLEAWMSNAEDCCQRSGVQMPTPPPSGYNAW
DTLPSPRTPRTTRSSVTSPDEISLSPGDEDMPLCGICMCSISVFEDPVDMPCGHEFCRAC
WEGFLNMKIQEGEAHNIFCPAYDCFQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPAI
RWCPTAGCERAVRLTRQGPGTTGSDPLTFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQ
TWKMWLQKVSEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTVEAEKKHKTFQELDRFM
HYYTRYKNHEHSYQLEQRLLKTAKEKMEQLSRALSRAEGGPPDTTFIEDAVHELLKTRRI
LKCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAPRHSFAGGTWDWEYLGFASPEILRNQSILGGSAQMENSQ
SAGIQQQEYAEFQYRRRHRQRRRGDMHSLRSNTPDPDDPSESTLETQEGGSSRRHGTSMV
SSASMSILQSSSLHDYTTVSRSENQDSLQALSSLDEDDPNILLAIQLSLQESGLAMAGDT
QEFLNNEASLGAIGTSLPSRLNTAPQSMEVPRASLSSSELLELGDSLMRLGSVTNPYATD
RFENMCSFGDAAGGVLSSSSDTDSASHDPSMNANLLGNIMAWFHDMNPQSIALIPTAPSE
TDLDSQQLSTSEELQSCRTEEAAQQEQHVHFESPSAGEGNQAMESEERTFQERAAVQDPL
QESMEQHCSGELGHSGRSECDSAPESQIVSTTSEWDEQVHLV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggggaacactgcaacaaagtttcgcaaggcacttataaatggagatgaagcacttgct
taccagctctatgagagcaacccccagttcaaggaatccctggatccaaatacctcatat
ggggaaccctaccaacacaacactccccttcactatgctgcaaagcacgctatgacccgt
ctgctcagagctttcctctacagtaaggatggcaacccaaacaagcgcaatatccacaac
gaaacatcaatgcacctgatttgcatgggaccgcaaattatgctaccagagggggcactg
cacccgaggatttcccggccatatgaggatgagcagaaaagagcagactgtctgcagatg
accctcaagtggactggggcgaagctggaccagggagagtacgaacgagcagatgtcaat
gcagttgacaacaagaaaagcacgtgtttgcactacgctgctgcctcagggatgaaaagt
tgcgtggagtacctggtgaaaagtaatgcagacttgttttgtgaaaatgaagataaagac
actccctgtgactgtgcagagaagcagcaccacaaagaactggcactgaatcttgaatct
cagatggtcttctccagagatcctgaagccgacgacattgaagcagagtatgctgcttta
gacagaagggagccctatgaaggcctgagaccccaggatctgcgccgcttaaaggatatg
ctcattgtagagactgcggatatgctccagacgccccttttcactgctgaagccctgctc
cgagcacatgactgggacagggaaaaattacttgaagcctggatgtccaatgctgaagac
tgctgccagcgttcaggcgttcagatgcctactcctcctccaagtgggtataatgcctgg
gacacccttccctctcctaggacacctcgtaccacccgttcctctgtcacatcacctgat
gaaatcagcttgtcccctggtgatgaagacatgcctctgtgtggcatttgcatgtgcagc
atttcagtgtttgaagacccagtggacatgccgtgtggacatgaattttgcagggcatgc
tgggaagggtttttaaacatgaagattcaggaaggagaggcacataatatcttctgccca
gcctatgactgtttccagctggttcctgtggaagtcatagagagtgtggtttccagagag
atggataagcgataccttcagtttgatattaaggcttttgtagaaaacaaccctgccatt
cggtggtgtcccacagcaggctgtgagagagctgtacggttaacgaggcagggtccaggg
acgactggatcagacccactcaccttccctttgttgagagctcctgcagtggattgtgga
aagggccatctcttctgctgggaatgtttaggggaggcacatgaaccatgtgactgccaa
acctggaagatgtggttgcagaaagtttccgaaatgaagccagaagaattggttggagtc
agcgaggcatatgaagatgctgccaactgcttgtggttacttacaaactccaagccatgc
gccaactgcaagtctccaatccagaagaatgagggttgcaatcatatgcagtgtgccaag
tgcaagtacgacttctgttggatctgcctggaggagtggaaaaaacacagttcatccaca
ggaggttactatcggtgcactcgatatgaggtcattcagcaggtggaggagcagtccaag
gagatgacagtggaggccgagaagaagcacaagacctttcaggagctggaccgatttatg
cactactacactagatataaaaaccacgagcacagctaccagctggaacagcgactgcta
aaaacagccaaagaaaagatggaacagttaagcagagctctcagcagagcagaagggggc
ccacctgataccaccttcattgaagacgctgtacacgagctcttgaaaacccgccgtatc
cttaagtgttcttatccatatggtttttttttggaacccaaaagcacaaagaaggagatt
tttgaactaatgcagactgaccttgaaatggtgactgaagatcttgcgcaaaaagttaac
cggccttatcttcgcacccctcgccataaaattatccgagcggcatgccttgttcaacaa
aaaagacaggagttcctggcttcagtggcccgtggtgttgctcccaatgactctcctgag
gctcccagacatagttttgcaggcggaacatgggattgggaatatttgggatttgcatca
ccagagatcctgaggaatcaatcaatacttggagggagtgctcaaatggaaaactctcaa
agtgcaggaatccagcagcaggaatatgcagagtttcaatacagaaggaggcaccggcaa
cgcagacgtggagatatgcacagcctccgcagcaataccccagacccagatgacccaagt
gagagcactttagagacccaagagggaggtagcagtcggagacatggcacttccatggtg
agttcagcttctatgagtattctgcaaagctcttcgcttcatgactatactactgtcagt
cgctctgaaaaccaggactctcttcaggctctgagctccttggatgaagatgacccaaat
attcttctagccatccagctttcattgcaagagtctggactggcaatggctggcgatacc
caagagttccttaacaatgaagcttcactgggtgcaattggcacatctttgccttctaga
cttaacacagctccacagagtatggaggttcccagagcatctcttagtagttcagagctg
ctggaacttggcgacagtcttatgagattaggctcagtgacaaatccctatgccactgat
cgttttgagaacatgtgttcttttggtgatgctgcgggaggagtcctgtcctcttccagc
gatactgattctgcaagccacgacccatcgatgaatgcaaatctgttaggcaacatcatg
gcttggtttcatgatatgaaccctcagagtatagcactcattcccactgcaccctctgaa
acagacttggactctcagcagctaagcacttcagaggagctgcagtcttgcaggacagaa
gaagcagcccagcaagagcagcatgtacactttgagagtccaagtgctggagaaggaaac
caggccatggaatcagaggaacgcaccttccaggagagagctgctgtccaggatcccctg
caagaaagcatggagcaacactgtagtggggaactgggtcattcaggcaggtcagaatgt
gactcagcccctgaatcacaaattgttagtacgacatctgaatgggatgaacaggttcac
ttagtctga
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integrated database retrieval system
