Polypterus senegalus (gray bichir): 120515650
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Entry
120515650 CDS
T08668
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120515650 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120515650 (pex1)
Membrane trafficking [BR:
psex04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120515650 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
AAA_7
RNA_helicase
AAA_5
DUF815
AAA_22
TIP49
AAA_33
AAA_24
ABC_tran
AAA_28
TsaE
RuvB_N
Sigma54_activ_2
NACHT
IstB_IS21
AAA_29
Bac_DnaA
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
120515650
NCBI-ProteinID:
XP_039592798
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All DBs
Position
15:complement(74923935..74982297)
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AA seq
1262 aa
AA seq
DB search
MLGSPGIQSVTLRFGNLHNCFLHVSPNLVALLRLQENQAIELSWGSHHSAFLSWTGGRQS
SFHGENIVEVSRQFAEKLGIEDGEEAFLKPCQQVSSVQQVFVEPVSPDDWEILELHSASL
EQSLLDQIRIIYPNGIFPVWVNHHTAISIKIESMTPACSYGRLEQLTELVISPKLRKAER
ASSGFPFTSDKQQRILKEEAVDTVTARAALEDVTLKKQPEETPKNIEHYQLSTSRQVTDL
RSLFRYLFSSRLESNKLTPSIPSIPTVLTDSIFRVCRTSPLSSNNLNQLEISCSNTVHVL
PWHYQPQRGDCCQFKLTCGRLTKLLSVREKSKQDSHRKEKKEQISNKANQTSSSDGVKET
NSTVVRVICHGAEDLLSAQKCIRTQKLYSGKVWISESLRKRLNVELCSAVRICPLNSKPR
VVSALRLQPLQNVKINEQDVKSSFFDWLHTQSNEELPWLTGRFNGVQLRVNEVQTEFSLS
VIQPRAGDDEQSEVFFLLPSLLEKIDVQVIMEPLTTELQKSDEFSQLLSFPVLDHLGGIG
NLSQETFEHISHSLMGHPFSQEFMVQSLGLRNGGLLLTGSKGSGKTSFAKALCRKAAVSL
DAYVEVIECKQLQGKRVETVRKKLEDVFAEAVWRQPSIIFLDDLEHIAGSASSPELEQSP
DAMMSKQIAQVLKDLVNEAVAYGSLIAFIATSQSKPSLDQSLLMVQGSHFFQCFKSIHLP
NQVQRSELLCCVTKNKTNVNEGSLQMVDIQSIAKETEGFVAADFVVLVERAVHANMTSNK
STSQGVFLSTSDFQQALKGFMPTSLRNANLHTPQQIGWNHIGGLYEVKQLLIDTIQLPGK
YPALFSNLPIRHRSGVLLYGAPGTGKTLLAGATAKESGMNFIKIKGPELLSKYIGASEQA
VRDVFSRARAAKPSLLFFDEFDSIAPRRGHDNTGVTDRVVNQLLTELDGVEGLSGVYVLA
ATSRPDLIDPALLRPGRIDKSVYCPPPNQVGRLEILKALSLSVPLARDVDFELIASNTEF
FTGADLKALLYNAQLEAIHSNLAAGPFHDMGSGSDSDVSLSSMIFLNHSSGSDDSSGEVE
GTLENPIMCPDSTELLSEDPQQNIWRLYFGSSYESELGNKTPSELNSQCLSGPNSLTHDF
TGASMRDLTSFHAPVLMTSLQDGFQELSAEQMEHLSLEVNNIKTNCRIRNTEDISHMQSA
QSKPAILICQSHLLAALTNTKCSISQQAWNKYTDLYGNFGCSRDGKSKSGSFLKPSQRVT
LA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcagcccgggaatccaatcggttactttgagatttggtaacctccacaactgc
tttctgcacgtgtctcccaatctggtagctctgctgcgacttcaggagaatcaagccatt
gagctgtcctggggttcccatcattctgcatttctcagttggactggaggtcgtcaaagt
tcctttcatggagaaaatattgtagaagtgagcagacagtttgcagaaaaacttggaatt
gaagatggagaagaggcttttctgaaaccttgccagcaagtctcatctgtacagcaagta
tttgtggaacccgtttctccagatgactgggaaatattggagcttcacagcgcgtctctt
gaacaaagtcttttggaccaaattagaataatttaccctaatggaattttcccagtgtgg
gttaaccatcatacagctatttccataaaaattgaatcaatgacacctgcgtgttcttat
ggtcgactagaacaactcacagaattggtcatttctcctaaattgcggaaggcagaacga
gcatcttcaggtttccctttcacatctgataagcaacaaaggatattaaaagaggaagct
gttgatactgtaactgctagagcagcattggaagatgtaacacttaagaaacaaccagaa
gagacaccaaaaaatattgaacactatcagctgtctacatctagacaagtaacagatttg
agaagcttatttaggtacttgttttccagtcgattggagagcaataaattgactccttcc
attccatcaattccaacagtgctaacagattcaatattcagggtctgcagaacttcccct
ctttcttctaacaacttgaatcaactagaaataagctgctcaaatacagtccatgttctt
ccatggcactatcaaccacaaagaggagattgctgccagtttaaattaacatgtggcagg
ctcaccaaacttttgtcagtcagggaaaagtcaaagcaggattctcacagaaaagaaaag
aaagaacaaatttccaacaaagcgaatcagacttcatctagtgatggggtgaaagaaact
aattcaactgttgttcgtgttatctgtcatggagctgaagacttattgtctgctcagaaa
tgtatcagaactcaaaaactgtacagtggaaaggtgtggatttcagaaagcttgaggaaa
aggttgaatgtcgaattgtgttcagctgtaagaatatgtcccttgaattccaaaccaaga
gtagtgtctgcccttaggctacagccacttcaaaatgtgaaaataaatgaacaagatgtg
aaatcgtctttctttgattggcttcatactcagagtaacgaggagctcccctggttaaca
ggcagatttaacggggtccagctacgagttaatgaagtccaaacagaattttcactatct
gtgattcagccacgtgcaggtgatgatgaacaaagcgaagttttctttttgttacccagt
ctgttagaaaaaattgatgtacaggtcatcatggagcctttgacaacagaattgcaaaaa
tcagatgagttcagccagctgctcagtttcccagttttggaccacttggggggcattggt
aatttgagccaagaaacctttgagcacatttctcatagcttgatggggcatcctttttct
caggagttcatggttcagtcactgggacttcgaaatgggggtcttcttttaactgggtca
aagggcagtggaaagacatcctttgctaaggcactctgtaggaaagctgctgtaagctta
gatgcatatgtagaagtaattgaatgcaaacagcttcaaggaaaaagagtagagactgta
cgtaagaaactggaggatgtgtttgcagaagcagtatggaggcaaccatccataattttt
cttgacgacttggaacatattgctggatctgcttcttctccagagcttgagcagagccct
gatgcaatgatgagcaaacaaatagcacaagttttgaaggacctggttaatgaagcagtt
gcttatggaagtcttattgcattcattgctacatctcaaagtaaaccttctttagaccag
tctcttctgatggtgcagggctcacactttttccagtgttttaaaagtattcatctgccc
aatcaggtccagcgaagtgaattattatgttgtgttacaaagaacaaaaccaatgttaat
gaaggaagtctgcaaatggtcgatatccagtcaattgcgaaggaaactgaaggctttgtg
gctgctgattttgtggtccttgttgaaagagcagtgcatgccaacatgaccagtaacaag
agcacttcacaaggtgtctttttatcaaccagtgattttcagcaagcacttaaaggattt
atgccaacatctttgagaaatgctaacctacatactcctcaacaaattggttggaaccat
attggtggcttgtatgaagtcaaacaactgttaatagatactatccagttaccaggaaag
taccctgctttattctccaatttgccaatacgtcacagatctggtgtgctgctgtacggt
gcaccaggtacaggaaaaactcttttggctggagccacagcaaaagaaagtggtatgaac
ttcattaaaattaagggtcctgagcttcttagtaaatatattggtgcaagtgagcaggct
gttcgagatgtttttagtcgggcccgggctgccaaacctagcctcttgttttttgatgag
tttgactccattgcccctcgtcgaggccatgacaacacaggggtcacagacagagtagtt
aaccaactgcttactgaactcgatggtgttgaaggattatctggtgtatatgttttggca
gccaccagtcgccctgacttaatagacccagctctcttaagacctggacgaatcgataag
tccgtgtactgccctcctcctaatcaggtaggtcggctagaaatcctcaaagcccttagt
ctctcagtacctctggctagagacgtggactttgagctcattgcctccaacacagaattc
tttactggggctgacctgaaggctttgctgtataatgcccagctagaagcaattcacagc
aacctggctgcaggccctttccatgacatgggttccggttctgacagtgatgtcagcctg
tcttcaatgatcttcttgaaccacagcagtggctcggatgattcttctggggaggtagaa
ggaaccctggagaaccccatcatgtgccccgactctacagagttactttctgaagaccct
cagcagaatatctggcgtctttattttggcagttcttatgagtcagagctgggaaataag
accccctcagaactgaactctcaatgcttgtcaggaccaaactcattgacgcatgatttc
actggagcctcaatgagagacctgacatccttccacgctccggttttgatgacgtccctt
caggacggtttccaggaactcagtgctgagcaaatggagcatttgagtttggaggttaac
aatattaaaaccaactgcaggatcagaaatacggaggacatttctcacatgcagtccgca
cagagcaaacctgccatcttaatctgtcagtctcaccttctggctgcattgacaaataca
aaatgctcgatatcccaacaggcgtggaacaaatatacagatctgtatgggaactttgga
tgttcgagggatggcaagtctaagagtggatcatttttaaagcccagtcagcgggttact
ttagcgtag
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