Polypterus senegalus (gray bichir): 120515712 Help Entry 120515712         CDS       T08668                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism psex  Polypterus senegalus (gray bichir) Pathway psex04510   Focal adhesion psex04512   ECM-receptor interaction psex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:psex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120515712 (col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120515712 (col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120515712 (col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:psex00536]     120515712 (col1a2) Glycosaminoglycan binding proteins [BR:psex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120515712 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  120515712 NCBI-ProteinID:  XP_039592895 LinkDB All DBs Position 15:77789294..77843923 Genome browser AA seq 1359 aa AA seqDB search MLSFVDNRIALLLAVTFLATCQFAQGLEGPQGPQGDKGPQGDRGPQGPNGRDGDPGLPGP PGPPGPPGLGGNFAAQYDSSKSADPGPGPMGLMGARGPSGPPGPPGSQGFQGHAGEPGEP GQTGPQGSRGPAGPPGKQGEDGSPGKSGKPGDRGPPGAQGARGFPGTPGLPGMKGHRGYT GLDGRKGEAGAAGPKGEPGSNGENGTPGQLGARGLPGERGRVGPSGPAGARGSDGNAGPA GSAGPIGSAGPPGFPGAPGQKGDVGPVGPQGPAGAQGARGEAGPAGVVGPAGPVGNPGNN GLNGAKGAAGLPGVAGAPGFPGPRGGPGPQGPAGSAGPRGNSGEPGPSGPKGETGSKGEP GNAGPPGAPGPSGEEGKRGPTGEAGPSGPAGNRGERGTPGTRGVPGPDGRGGPIGLPGSR GATGAAGARGPSGDAGRPGEAGLPGARGLPGSSGNSGPQGKEGPAGPAGQDGRTGAPGPA GPRGQPGNIGFPGPKGPAGEPGKPGERGATGPAGARGAPGPDGNNGAQGPPGPTGNSGER GEQGAAGAPGFQGLPGPAGPPGEAGKVGDRGIPGEPGISGPAGARGERGNPGPAGSQGPQ GAIGARGASGAPGPDGNKGEPGIGGPAGPAGPQGPSGMPGERGGAGTPGPKGEKGETGPR GPDGNQGRDGPRGAPGASGPPGPAGANGDKGESGSSGPAGPAGPRGPSGERGESGPVGPP GFAGPPGADGQAGARGDRGPTGPKGEAGAQGSAGPVGAPGPAGPSGPGGPTGARGEVGSA GATGGPGAAGRVGPQGPPGIGGPPGPAGAAGKDGPRGARGDSGPAGRPGEQGIAGPPGAP GERGPSGETGPAGAPGVPGPQGMLGSPGIVGLPGSRGDRGLPGGPGAPGEAGKLGPAGPS GQRGPAGGIGPAGLTGPAGEAGRDGNPGNDGPPGRPGAAGAKGDRGEPGSPGHSGSAGAH GAPGPAGPSGRVGNRGEPGPSGPAGSVGPAGARGAPGPQGPRGEKGVAGDKGERGMKGRP GHQGLQGLPGPQGANGDQGSAGPAGPAGPRGPAGPSGPSGKDGQNGHPGVIGPPGSRGPP GHIGPAGPPGLPGPAGIAGAPGGGYEISGLEGDYRADQAALRAKDYEVDATLKSLNTQIE NLLTPEGSRKNPARTCRDIRLSHPDWTSGYYWIDPNQGCTMDAIQVHCDFTTGETCIYPN PASFPRKNWYRSDKDKKHVWFGENINGGIQFEYNDDSISPQSMATQLAFMRLLANHASQN ITYHCKNSIAYMDEEAGNLKKAVLLQGSNDVELRAEGNSRFTFSVLEDGCTRQTGQWGKT VIEYRTSKPSRLPILDIAPLDIGGDDQEFGLDIGPVCFK NT seq 4080 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggataatcggattgcgttgctgcttgcagtaactttcctagcaaca tgtcaattcgcgcaggggcttgaaggaccacagggtccccagggagataaaggtccccag ggagacaggggtccccaaggtccaaacggcagagatggcgaccctggtctacccggccct cctggcccacctggtccccctggccttggtggaaactttgctgctcagtatgattcatcc aaatcggctgatcctggacctggacccatgggcctaatgggagcaagaggaccctctgga ccacctggaccacctggtagccaaggtttccaaggacatgctggagagcctggtgaaccc ggacaaactggcccacaaggttctcgtggccccgctggacctcctggcaagcaaggtgaa gatggtagccctggcaaatctggaaagcccggcgatcgtggacctcctggtgcacaaggt gctcgtggtttccctggaactccaggactgcctggcatgaaaggacacagaggatacact ggtctggatggtcgcaagggtgaagctggtgctgctggccctaagggtgaacctggctca aatggagaaaatggaacacctggccaactgggagcacgtggtcttccaggagaaagaggg cgtgttggtccatctggccctgctggtgctcgtggtagtgatggtaatgctggtcctgct ggctctgctggtcctattggttctgctggtcctccaggcttccctggtgctcctggccaa aagggagatgttggccctgttggaccccaaggacctgctggagcacaaggtgcaagagga gaggcaggcccagccggtgttgttggccctgctggccctgttggtaaccctggtaacaat ggcttgaatggtgctaaaggtgctgctggtctccctggtgttgctggtgctcccggattt ccaggtcccagaggtggtcctggaccccaaggtcctgctggatctgcaggtccaagaggc aacagtggtgaacctggcccatctggtcctaagggtgagactggttccaagggtgagcct ggcaatgctggtccccctggtgccccaggtccctctggtgaagaaggcaagagaggtcca actggtgaggctggcccatcaggcccagctggtaaccgtggtgagcgaggtacccctgga actcgaggtgtccctggacctgacggcagaggtggacctattggtcttcctggaagccgt ggtgccactggagcagctggagcaagaggaccctctggtgatgcagggcgtcctggtgag gctggtcttcctggtgcacgtggtcttcctggtagctctggcaactctggaccacaagga aaagaaggacctgctggtcccgctggtcaagatggtcgcactggtgcccctggcccagct ggaccaagaggtcagcctggcaacataggattccctggccctaaaggacctgctggagag cctggtaaacctggtgagagaggtgcaactggtcctgctggcgcaaggggagctcccgga cccgatggaaataatggtgcacaaggacctcctggccctactggcaacagtggtgaacga ggagaacaaggagcagctggagctcccgggttccagggtcttcctggtcctgctggtccc cctggtgaggctggtaaagttggtgacaggggtattcctggtgagcctggtatatctggt cctgctggtgcaaggggtgaacgtggcaatccaggtcctgctggttctcaaggtcctcaa ggcgctattggtgctcgtggtgcttctggtgctcctggccctgatggcaacaaaggtgaa cccggtattggtggtcctgctggtcctgctggtccccaaggtccttctggtatgccaggt gagcgtggtggtgctggcactcctggacctaaaggtgaaaagggagaaactggcccaaga ggccccgatggtaaccaaggaagagatggcccacgtggagctcctggagccagtggtcca cctggaccagctggtgctaatggtgacaagggtgaatctggttccagtggtcctgctggc cctgctggaccccgtggtccttctggggaacgtggtgaatctggcccagttggtcctcct ggatttgctggtcctcctggtgctgatggacaagctggcgctagaggcgatagaggccct actggacctaaaggagaggctggtgctcagggttctgctggtcctgttggtgctcccgga cctgctggtccttctggtccaggaggtccaactggtgctcgtggtgaagttggtagtgct ggtgcaactggtggtcctggtgcagctggaagagttggcccacaaggtcctcctggaatc ggtggaccccctggtcctgctggtgcagctggcaaagatggacccagaggtgctcgtggt gacagcggcccagctggacgccctggtgagcaaggcattgctggtccccctggtgcccct ggtgagagaggcccatctggtgaaactggccctgctggtgcacctggagttccaggacct cagggtatgcttggttcccctggtattgtcggtcttcctggatcaagaggtgatcgtggt cttcctggtggccctggtgcacctggtgaggctggaaaattaggccctgctggtccctcc ggacaacgtggccctgctggtggaattggacctgctggtttgactggcccagctggtgag gctggacgcgatggaaaccctggaaatgatggtcctcctggtcgccctggtgctgctggt gcaaagggagatcgtggagagccaggatctcctggtcattctggatcagctggtgcccat ggtgccccaggacctgccggcccatctggcagagttggaaatcgtggagagcctggtcca tcaggtcctgctggttctgttggccctgctggcgcaagaggtgctcctggtccacaaggt ccccgtggagagaaaggtgttgctggagataaaggtgaaagaggaatgaaaggacgccct ggccaccaaggtctccaaggtctgcctggtccacaaggtgccaatggtgaccaaggttct gcaggtccagctggtcctgctggcccaagaggtcccgctggtccctctggcccatctggc aaagatggtcaaaatggacaccctggagtaattggtccacctggttctcgtggtcctcct ggtcacattgggccagctggtccccctggtcttcctggacccgctggtattgctggtgct cctggtggtggttacgaaatttctggacttgagggagactacagagctgatcaagctgcc cttagggccaaggactatgaagttgatgccactctgaaatctctgaacacccagattgag aaccttctcactccagagggctctagaaagaatccagctcgtacctgccgtgacatcagg cttagtcacccagactggactagcggctactattggattgaccccaaccaaggctgcact atggatgccatccaggtccactgtgacttcacaactggagagacctgcatctaccccaac cctgccagcttcccaagaaagaactggtacagaagtgacaaggataagaagcatgtatgg tttggcgagaacatcaatggtggcattcagtttgaatacaatgatgacagcataagtcct cagtcaatggcaacccaacttgccttcatgcgccttcttgcaaatcatgcctctcaaaac atcacctaccactgcaagaacagcattgcctacatggatgaagaagctggaaacctgaag aaggctgtcttgctgcagggttctaatgatgttgagctcagggctgagggtaacagccgc tttacattcagcgtgctggaagatggctgcactagacaaactggccagtggggtaagacc gtcattgaatacagaacatcaaaaccatctcgtcttccaatccttgacattgcacctttg gacattggcggagatgatcaagaatttggtttggacattggcccagtctgtttcaaataa

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