Polypterus senegalus (gray bichir): 120515862
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Entry
120515862 CDS
T08668
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120515862 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120515862 (ubr5)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120515862 (ubr5)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
HECT type E3
120515862 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
120515862
NCBI-ProteinID:
XP_039593136
LinkDB
All DBs
Position
15:119134858..119245179
Genome browser
AA seq
2817 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSLNSHPPLNVLEQAAIRQCVVGPNHAAF
LLEDGRICRIGFIVQPERLELGKPDGSDGGCFGFLRTMGIKRKSSKLSSGSGTGRTSRPG
RTSDPPWFLSGSDTLGRLAGNTLGSRWSSSVNGSGGGGSSGRSSTAARDSRRQTRVIRTG
RDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLL
SRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFR
RSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDAERGSTSREGEPSLD
KKTIPVQSPVSLTEELQWWSDKDGAKFVSIGALYSELVAVSSKGELYQWKWNEAEPYRNS
QNPSIHHPRVAFLGLTNEKITLLSANCIRATVATESNKVATWVDDTLSSVASKLEHGTQT
FSELQGERIVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLEKARAKNKKAKSSAGISS
MPNITVGTQICLRNNPLYHAGAVAFSINAGIPKVGVLMESVWNMNDSCRFQLRSPESLKN
LEKTNKTIETKAENKPESVKTEMGPPPSPASTCSDTSSIASSASLPYKRRRSTPAPKEEE
KVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSTVSNQSTVASDSDPSSL
LQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEILAVNVDSKGVHAVLKTGS
WVRYCIFDLASGKAEQENNFPTSSLAFLGQNERNVAIFTAGQESPIILKDGNGTIYPMAK
DCMGGIRDPDWLDLPPISSLGMGVHSLTNLPANSTMKKKAAVIIMAVEKQTLMQHILRCD
YEACRQYLMNLEQAVLLEQTPQALNTLLGHRCDGNRNILHACVSVCFPTSNKETKEEEEA
ERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRSLRLREMMRRSLRAAGLGRH
ESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGSLTTASTGTNQGPSTS
TIPGPSSESSVVESKDRKVNAHLILKLMCESVGLRPYLRELLSAKDARGMTPFMLAVSGR
AYPAAITILEAAQKIAKGDPSSSEKEDVLFMEMVCPSGTNPDDSPLYVLCCNDTCSFTWT
GAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLI
AGQKSARLDLLYRLLTTTNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNR
KTANAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLL
PEEQVYLNQQSGTIRLDCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAINV
TMRFLRSVARVFVILSVEMASSKKKNTFIPQPIGKCKRVFQALLPYAVEELCNVAESLIV
PVRMGIARPTAPFTLASTSIDAMQGSEELFSVEPLPPRPSPDQSSNTSQSQSSYIIRNPQ
QRRISQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEEDHHDEQEEQGEENTEAEGQHDE
HDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAATAGSEAGGRVSLAFSLFG
ASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVENETFLIEPLERTTNSPYANSAAQAPRSM
QWAVRSTQNQRTTSNTPSSTSTPAASSTGLIYIDPSNLRRSGAISTSAAAAAAALEASNS
SSYLTSASSLARAYSIVIRQISDLMGLIPKYNHLVYSQIPSAVKLTYQDAVNLQSYVEEK
LIPTWNWMVSIMDSTEAQLRYGSAISSAGDPGHPSHPLHASQSSARRERMTAREEASLRT
LESRRRATLLSARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQAL
IYWIKAMNQQTTLDTPQLERKRTRELLELGLDNEDSEHENDDDTNQSSTLNDKDEESIPA
ESGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEGIPLADQPHLLQPNARKEDLFGRPSQGL
YSSSYNTSKGLMEVTVDRNCLEVLPTKMSYSANMKNVMSMQSRQKVSSEQMLPEEETEST
KPGPSAHDLAAQLKSSLLAEIGLTESEGPPLTSFRPHCSFMGMVISHDMLLGRWRLSLEL
FGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNQQSRDLALEVDRDRDLLIQQT
MRQLNSHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCI
QNASKGMQTSNLMQRLRNRDRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPASEGN
PSDDADPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARV
DEAMELILAHGRENGADSILDLGLLDTSDKSQQENRKRHGSSRSVVDMELDDADDGDDNA
PLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRK
VNWHDFAFFDPVMYESLRQLILASQSTDAEAVFAAMDLAFAIDLCKEEGGGQVELLSGGV
NIPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGC
GEVNVQMLISFTSFNDESGETAEKLLQFKRWFWSIVEKMSITERQDLVYFWTSSPSLPAS
EEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8454 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatacactttgtggttcacccgttgcccgggactgaagaccagctcaatgac
agattgcgtgaagtttcagagaaacttaataagtacagcctcaacagtcacccaccactg
aatgtattagagcaagctgcaattagacagtgtgttgtgggaccaaaccatgctgctttt
cttctagaggatggtcgaatctgtagaattggctttattgtgcaacctgagagattggag
ctgggcaaaccagatggaagtgatggaggctgttttggattcctgaggaccatgggtatt
aaaagaaagagttcaaagttgagcagtggttcagggacaggaaggacttccaggccaggc
aggactagtgatccgccatggtttttgtctggttctgacacactgggcagactggcaggc
aacacccttgggagtcgatggagctctagtgttaatggaagtggtggtggcggctcttca
ggaaggtcttccacagcagcaagagactcaaggagacaaacacgagttatccgtacaggg
cgagaccggggttctggattattgggcagccagcctcagccagtgattccggcatctgtc
attcctgaggagctcatatcccaggctcaggtagttctgcagggaaagtccagaagtgtt
atcattcgtgaactacaacggacaaacctagatgtcaacctagctgtcaataacttgttg
agtcgtgatgatgaagatggggatgatggggatgatacagcaagtgaatcttatttgcca
ggagaagatcttatgtctcttttagatgcagacattcactctgcacaccctagtgttatc
atagacgccgatgccatgttttctgaagatattagttactttggttacccttcttttcga
cgttcttccctttcaaggcttggatcttctagagttctccttcttcccttagagagagac
tcggagctgttgcgtgagcgtgagtccgtattacgtttgcgtgaacgaaggtggcttgat
ggagcctcttttgacgctgaacgaggctctacaagcagagaaggagaaccaagtctggac
aaaaagacgatacctgttcaaagtccggtttccctcactgaagagctgcagtggtggtct
gataaggatggtgcaaagtttgttagtattggagccctctactcagaacttgtagcagta
agtagtaaaggagagctataccagtggaagtggaatgaagctgagccctatagaaattca
cagaatccttcaattcatcatccaagagtcgcttttcttgggttaaccaatgaaaaaatc
acgcttctatctgctaattgtattagagcaactgttgccactgaaagtaataaggtagcg
acctgggttgatgatactttgagcagtgtagcttccaaactggaacatggcactcaaacg
ttttctgaactccagggagaaagaattgtgtctttgcactgctgtgccttgtatacgtgt
gcacaactggagaacagcctatactggtggggtgttgtgccctttagtcaacggaaaaag
atgcttgaaaaggcgagagcaaagaacaaaaaggcaaaatccagtgcaggcatctcttca
atgccgaatattactgttggaacgcagatatgtcttcgaaacaaccctctttaccatgct
ggagcagttgcattttctatcaatgctggaattcctaaagtaggagtattaatggaatct
gtatggaacatgaatgacagctgtaggtttcaactccggtcaccagagagtttaaagaac
ttggaaaaaaccaacaaaactatagaaaccaaagctgaaaataaacctgagtctgtgaag
actgagatgggtccacctccttctccagcttctacttgtagtgatacatcttcaattgcc
agcagtgcttcactgccatataaacgtcgacgatcaacacctgcacctaaagaagaagag
aaagtaaatgaagaacagtggcctttaagagaagttgtgtttgttgaagatgtgaagaat
gtaccagttggaaaggtattaaaagtggatggtgcatatgttgctgtgaaatttccaggc
acttcgagtacagttagcaatcagagcacagttgcttctgattcagatccctcttcattg
cttcaggactgtagacttctgagaattgatgaactgcaggtagttaaaactggtggcact
cctaaagttcctgactgtttccagagaactccgaagaaactgtgcatcccagaaaaagct
gagatactagctgtaaatgttgattccaaaggagtacatgctgtattaaagactggcagt
tgggtgcgttattgcatttttgaccttgcatctggaaaagcagagcaggaaaataatttc
cctacaagtagcttggcctttcttggacaaaatgagagaaatgtggcaatcttcactgca
ggccaggaatccccaatcattttgaaggatgggaatggtaccatctacccaatggcaaaa
gattgcatgggtggtattagagatcctgattggttggatcttccaccaatctcaagcctt
ggaatgggagtacactctttaactaaccttcctgcaaattccaccatgaagaagaaagca
gcagttattattatggctgtggaaaaacaaacattaatgcagcatattttgcgatgtgac
tatgaagcatgtagacaatacttaatgaatctcgagcaagctgttcttctggaacaaacc
cctcaagccttaaacacattgcttggtcacagatgtgatggtaatcgaaatatcctgcat
gcatgtgtttcagtgtgctttccaaccagcaataaggaaacaaaggaagaggaagaagct
gagcgttcagagagaaacacatttgctgagagactgtcagcggttgaggctatagcaaat
gcaatttctgttgtgtcaagtaatagttctggcaaccggacaggctcttccagcagcaga
agtcttcgactacgtgagatgatgagacggtctttgagggcagcagggttaggccgtcat
gagtctggcccttcatccagtgaccatcaagacccagtttctccaccaatagctcctccc
agctgggtacccgaccctccaccgatggatccagatggtgatatagattttattctcgct
cctgctgttgggtctcttactacagcatcaactggcactaaccaaggacctagtacatca
accattccaggtccttcatcagaaagttcagtggtagaatcaaaggatcgaaaagtcaat
gctcatttgattctaaagctgatgtgtgagagtgttggtcttcgaccatatcttcgtgaa
ctgctttctgccaaagatgcaagaggaatgactccatttatgcttgctgtgagtggaaga
gcatatcctgctgctataactattcttgaagctgctcagaaaatagccaaaggtgacccc
tcctctagtgaaaaagaggatgtgttattcatggagatggtatgtccatctggaacaaac
ccagatgattctccattgtatgttctttgctgcaatgatacatgcagttttacatggact
ggggcagagcacattaatcaggacatttttgaatgtcgcacttgtggattattggagtct
ttgtgttgctgtactgaatgtgccagggtttgtcacaagggacatgactgcaaattaaag
cgaacatctcctacagcatactgtgactgctgggagaaatgcaagtgcaaaacattgatt
gcaggacagaaatctgcacgccttgatttactgtacagattgcttacaaccaccaacctt
gtaacaatgccgaacagcaggggagaacacctacttctatttttagtgcaaactgttgct
cgacaaactgtggagcattgccagtaccgaccgcctagaattcgggaagaccgtaaccgt
aaaactgctaatgctgaagactcggacatgcctgaccatgatctagagcctcctcgtttt
gcacagcttgctcttgaacgagtacttcaagattggaatgcactaaaatctatgatcatg
tttggttcccaggaaaacaaagatccattaagtgcaagtagtagaataggtcatctgctg
ccagaagaacaagtttacctgaatcagcaaagcggaactatcaggcttgactgctttaca
cactgcttgattgtgaaatgcacggcagatattttgcttttagatactctgttgggaaca
ttggtgaaagagttacaaaataaatacaccccaggtcgaagagaagaagcaataaatgtc
acaatgaggttcttgcgctcagttgctcgagtctttgttattcttagtgttgaaatggct
tcttcaaagaagaaaaacacctttattcctcagccaataggtaaatgtaagcgtgttttc
caagctttgttaccctatgctgttgaagagctctgtaatgtggcagagtccttgattgta
ccggtgcgaatgggtattgcacgaccaactgctcctttcaccctggcaagtacgagcatc
gatgcaatgcaaggcagcgaagaattgttctctgttgagccactgccaccaaggccatct
ccagaccagtcaagcaacacaagtcaatcccagtcctcatatattatcagaaatccacaa
cagaggcgtattagtcagtctcagcctgtaagaggaagggatgaagaacaagacgatatt
gtttctgctgatgttgaagaggtggaggtggttgaaggggtagctggggaagaggatcac
catgatgaacaagaagagcagggagaggagaatacggaagcagagggtcaacatgatgag
cacgatgaggatggcagtgacatggagctggatttgcttgcagcagcagagactgaaagt
gacagtgaaagcaaccacagcaatcaggataatgccagtggtcgaaggagtgttgttaca
gctgccactgcaggctctgaagcaggcggtagggtctccttggcattttctttgtttggt
gccagcagtgttcctgcattcttttcagaggatgattcccagtccaatgactccagtgat
tctgatagcagtagcagccagagtgatgatgtggagaatgagacttttttgattgagcct
ttggaaagaactactaacagcccttatgcaaacagtgcggctcaagcacctcgctctatg
cagtgggcagttcgaagtactcagaaccagcgaactacaagcaatacaccttcaagcacc
tcaacccctgctgccagttccacaggcttgatctatattgatccatctaatctccgtcgc
agtggtgctatcagcactagtgctgctgccgctgctgcagctcttgaagcaagcaattca
agcagttacttgacgtccgccagtagtctagccagagcctacagcatagtcatccgtcag
atatctgatctcatgggattaattcccaagtataatcatctagtatactcccagatccct
tcagctgtcaaacttacttatcaggatgccgttaacctacagagttatgttgaagaaaag
cttattcccacatggaactggatggtcagtatcatggactcaacagaggcacagctgcgt
tatggttctgcaatctcatcagcaggagaccctggccaccctagtcacccccttcatgct
tcccagtcctctgcgagaagagaaaggatgactgcaagagaggaggctagcttgagaact
ttagaaagtcgaagacgtgctacactgttaagcgcccgtcagggaatgatgtctgcacgt
ggggacttcttaaactatgctctctccttgatgcgttctcataatgatgaacattcagat
gttttaccagttttggatgtctgttcattgaaacatgtagcttatgtgtttcaagcactt
atttactggattaaagcaatgaatcagcagacaacgctggatacacctcagctagaaaga
aaaaggacccgagagttattggaactaggtttggataatgaagactcggaacatgaaaat
gatgatgacaccaatcagagctctacactgaatgataaagatgaagaaagcattccagca
gagtctggccaaaaccaccctttctttcgccgctcagactctatgacatttttaggctgc
attcctcctaatccatttgaagtacctctggcagaagggatacccttagcagaccaacct
catctattacagccaaatgctagaaaggaagatctctttggccgtccaagccagggtctc
tattcttcatcttataataccagcaaggggttaatggaagtgacagtagacagaaattgt
cttgaggttctccctacaaagatgtcttattctgcaaatatgaagaatgttatgagtatg
cagtctcgccagaaagtcagcagtgaacagatgcttcctgaggaagaaacagaaagcaca
aaacctgggccctctgctcacgacctggcggcacagctaaagagtagtcttttggctgaa
attggccttacagagagtgaaggtccaccacttacctcattcagacctcattgcagtttt
atgggcatggtcatatctcatgacatgctgttaggaagatggcgtttgtcattagaatta
tttggtcgtgtctttatggaggatgttggggcagaacctggatcaatcttaacagagctt
ggtggctttgaagtaaaagagtcaaagtttcgccgtgaaatggagaaattacgaaatcag
caatcaagagatttggcactggaagtggatcgtgatagagaccttcttattcagcaaaca
atgagacaacttaacagtcattttggacgcagatgcactaccacgcctatggctgtgcat
agggtcaaagttactttcaaagatgaacctggtgaaggtagtggggtggctcggagtttc
tacacagccatagctcaggcattcctgtccaatgagaaacttccgaaccttgactgcata
cagaatgctagcaaaggaatgcagactagtaatcttatgcaaagactgaggaacagagac
agagaaagggaaagaagaagtggtggcttgagagcgggttctaggagagatcgtgacaga
gattcaagaaggcaactttccattgacacacggccatttaggccagcatctgagggcaat
cccagtgatgatgctgacccacttccggcacatcgacaggcactgggtgagaggctttat
ccacgagtacaggcaatgcaaccggcttttgccagtaaaattaccggaatgttgttagaa
ttgtctccagcacaacttttgctgcttttagccagcgaagattcactccgtgcacgtgta
gatgaagcaatggaactaattttagctcatggaagggaaaatggtgctgatagtatacta
gatttaggactgctagacacctctgacaaatcacaacaagaaaatcgaaagaggcacggt
tccagtcgcagtgtcgttgatatggaattggatgatgcagatgatggagatgacaatgca
ccacttttctatcaaccaggaaaacgaggcttttattcaccgaggcctggtaaaaacaca
gaggcccgactcaattgctttcgcaatattggaaggatacttggattatgtttgctgcaa
aatgaattgtgccctataacattaaacagacatgttattaaagtgttactaggcagaaag
gttaactggcacgattttgcattttttgatccggtgatgtatgaaagtttacgacagctt
attctggcttcacaaagcacagatgctgaagcagtatttgcagcgatggatttggcattt
gcaattgacctctgtaaagaggaaggtggaggacaggtggaactcttgtcaggtggcgta
aatataccagtaacacctttgaatgtatacgagtatgtcagaaaatatgcagagcaccgc
atgttagtagtagcagaacagccacttcatgcaatgagaaaaggtctcctggatgtgctt
cctaaaaactcccttgaagatcttacagcagaagattttcggttgctggtgaatggctgt
ggtgaagtcaacgtccagatgttaatcagttttacatcatttaatgatgagtcaggggaa
actgctgaaaagctcctgcagttcaaaagatggttttggtcaattgttgagaagatgagc
atcactgaaagacaagacctggtctacttttggacatcaagcccatccctaccagctagc
gaggagggttttcagcccatgccatcaatcacaattcggcctccggatgaccagcacctg
ccaactgcaaacacttgcatatctcgattatatgtgccactctactcctccaaacagatt
cttaaacaaaaacttttgctagccatcaagaccaagaattttggctttgtataa
DBGET
integrated database retrieval system
