Polypterus senegalus (gray bichir): 120515952
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Entry
120515952 CDS
T08668
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120515952 (recql4)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120515952 (recql4)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120515952 (recql4)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120515952 (recql4)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120515952 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-CCHC
Drc1-Sld2
zf-CCHC_5
ResIII
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
120515952
NCBI-ProteinID:
XP_039593275
LinkDB
All DBs
Position
15:complement(32724287..32782882)
Genome browser
AA seq
1438 aa
AA seq
DB search
MMDRYNDLKILLKKWESSFVQEHKRKPNKEDIDSASQETKELYREYRALKTTRENAENEK
MTASNSGISKQDDVIADSGCWGSHLNRVNTPSTKLTSKERDSLKVSALYYGMKLKSNMGT
LTKDRPTSLKKSFTPKRTLKKSPEKTTNTATVESPPLCVPNPSICTTPLSCSRVPSLSTE
EEDQPFQGLNVAKIISPVTCTKNEVKAQRLRNSMIKRLSSLDPGWLERCRVFAKVEQEDE
MPIRNMANGNLNAEYSKKNNLPNHLVMSSKEDAVDPEMLKELVCSLNSTETKQKEGSVNG
FQKTPSDHKTEKVTKSKYVENMHQYEFNEDEHPLSTDSKQNSGNAEFEQKTQETQKIGKE
IHSGVASEAEQPRKEIRKINKKRQRAEETVNSLEPTSVPKKRKTTKGSPVSTVGEKCGKP
KAGRRCGSKEVTEESSSAQNLKPDQTHSIENIFGELEDEAEAMRNTNTHASRGRRLGSKP
TDGNFVRINLKKKSHVKGFALKGALLRKQMYMHKFQLKGERFGGAGRGRGRGFVSSGDIC
FKCGGTGHWARDCKGRVPVVQLEEPDENAEEAFELPTLEEVARTTATLRCDPFVPAHSSQ
ENESEMKEEDYVLMNVIRPDYEKPTPPEAIKPLYHLEEDGKVIATPPEVYEALADFGYKS
FRPGQELAIMRILSGLSTLVVLSTGMGKSLCYQLPAYLYAKRSKSIALVVSPLVSLMDDQ
VSGLPPKVKAACIHSNMTKNQREAAIEKVKEGKVHVLLLSPEALVGGGHAGSGCLPPADQ
LPPVSFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLGVRCLLGLTATATLATARDIAHH
LEIKDEDGIAVRSAAVPPNLHLSVSMDKEKDQALVGLLKGDRFGSLDSIIVYCTRREETN
RIAALLRTCMQGVVLKEVPESIEEEFEDIHAKRKKALAKKMIRKPLKWIAESYHAGMSAS
QRRRVQNNFMCGELRIVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRAGRDGKS
AHCHLFLDPEGGDLCELRRHIYGDTVDYFTVKKLVQKLFPPCKCRQINEKQQALLKFGEV
EDEEMLSLPDPSNGQSPSSVHQHQEEEQNCSETQNVIRVCHTHERAVPIQETVEALDITE
EGIETMLCYLELHPQHWVELLHPTLSSCHLVCYSGPQQLRAIAKICPPVAVALARKRLAG
ESLSHSSSVTFDVVELADSMGWELIPVKRTLRQLQWKTERGPPGFRGTGKSGVLVEFSSL
SFHFRSYGDLTHQEMDSICEFLHQRIQAQEKTQLYQLKACFKAFFSVAYRSSTSCSDKMD
DDRSQKLKALLMNYFDKKAELDLSKKYEEDKEDCELSKYKLKDWEDQIRADIRSFLSTHN
EEKFSGRAIARIFHGIGSPCYPALTYGKDRRFWRKYINFDFNEIIRMATEEIIRTNID
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgttataatgacctcaaaatcttgttgaaaaaatgggagtcatcttttgtt
caggaacataaacggaagcccaataaggaagacatagacagtgcttcacaagaaacaaaa
gagttgtacagagaatatagagcactcaaaacgacaagagaaaatgcagaaaatgaaaaa
atgacagcatccaatagtggaatatccaagcaagatgatgtgatagctgattctggttgt
tggggctctcatcttaaccgagtcaatacaccatcaacaaagttaacttccaaagagagg
gactcgcttaaagtttcagctctgtattatggaatgaagttgaagtcaaacatgggcaca
ttaactaaggatagaccaacatctctgaaaaagtcatttactccaaagagaaccttaaaa
aaatcaccagaaaagaccacaaatacagctacagtggaaagtccaccattgtgtgtgcca
aacccaagtatttgtaccactcctctaagttgttctagagttccatccttgagtactgag
gaagaagatcaaccatttcaaggtttaaatgtggctaagatcatctcacctgttacttgt
acaaagaatgaggtaaaagcccagaggttacgaaattcaatgataaaaaggctgtcttca
ttagatccaggttggctggagcgttgtcgggtgtttgctaaagtggagcaggaggatgag
atgccaattagaaacatggcaaatggaaacttaaatgcagaatatagtaaaaagaacaac
cttcctaaccatttagtaatgtcttctaaggaagatgcagtagatcctgaaatgctgaaa
gaactggtatgctcattaaatagtacagaaaccaaacagaaagagggttctgttaatggt
ttccaaaaaacaccaagtgatcacaaaactgagaaagttaccaagtccaaatatgtagaa
aatatgcatcaatatgaatttaatgaggacgagcatcctctttctactgacagtaagcag
aattctggaaatgcagagtttgaacagaagacccaagaaacacagaaaattggcaaagaa
atacatagtggagttgccagtgaagcagaacaaccaagaaaggagataagaaaaataaac
aaaaaaagacaaagagcagaggaaactgtcaactctttagaacccacatctgtccccaag
aagagaaaaacaactaaaggcagtccagtttctacagtgggagagaaatgcggcaaacca
aaggctggtaggagatgtggatccaaagaggtcactgaggaaagtagcagtgcacagaac
ctgaagccagaccaaacacattcgatagagaatatttttggagaacttgaggatgaagct
gaagccatgagaaacaccaatacacatgcaagtaggggaagaaggcttggttccaaacct
acagatggaaactttgttagaatcaatctaaaaaagaaatctcacgttaaaggatttgca
ctaaaaggagctctgcttcgtaaacagatgtacatgcataagttccaactgaagggtgaa
cggtttggaggtgctggtcgaggaagaggaagaggttttgttagtagtggtgatatttgc
tttaaatgtggtggcactggacactgggctagagactgcaagggccgagtaccagttgta
cagttagaagagccagatgaaaatgctgaagaagcttttgagttgccaacacttgaagaa
gtggcccgcaccacagctacgcttcgatgcgatccttttgttcctgcacattctagtcag
gaaaacgagtctgaaatgaaggaggaagattatgtcctaatgaatgtgatccgtcctgat
tacgaaaagccgactcccccagaagccattaaacctctctaccaccttgaggaagatggc
aaggtaatagcaactccaccagaagtttatgaagctcttgctgattttggttacaagtca
tttagacctggtcaagaactcgctattatgcggatcctttcaggcctgtccactttagtg
gttctttctactggaatgggaaaatctctttgctaccagcttccagcctacttatatgcc
aaaaggtcaaaaagcattgcactagttgtctctccattagtgtctcttatggatgatcag
gtttctggtctccctcccaaagtaaaagctgcctgcattcattccaacatgacaaaaaat
caaagagaagctgccattgaaaaggtgaaagaaggcaaagtccacgtactactgctgtct
cctgaggcacttgttggcggtggacatgctggatctggctgcctgcctcctgccgatcag
cttcccccagtatcctttgcatgtatagatgaagcacattgtgtatctgagtggtcccac
aatttccggccctgttaccttaggctttgtaaagttcttagagaccgcttgggtgtgcga
tgtttgctaggtctgacagcaactgcaactcttgccacagcacgtgatattgcccatcac
ctggagatcaaagatgaagatggaatagctgttagatctgcagcagtgcctcctaatttg
catctgtctgtgtcaatggacaaagaaaaagaccaggctcttgtgggtttgctgaaaggt
gatcgatttggctcactggactccattattgtctactgcactcggagagaggagactaac
cgtattgctgccttgctgcgtacttgtatgcaaggtgtagtgctaaaggaagtccctgaa
tccattgaagaggaatttgaggatatccatgctaaaaggaaaaaggctctggctaagaag
atgatccggaagccactgaagtggatagcggagtcttaccatgcaggcatgtctgcatct
cagcgtcgaagagtccagaacaacttcatgtgcggggagctgcgtattgttgtggcaaca
gtggcttttggaatgggcttggacaagtcggatgtgcgtgggatcatccactataacatg
ccgaaaagctttgaaagctatgtgcaggaaattggcagagctggcagggatgggaaatcc
gcccattgccatctttttctggaccctgagggtggagatctttgtgaactacgaaggcat
atctatggagatactgttgattatttcactgtgaagaaacttgtgcagaaattatttcca
ccttgtaagtgccgtcaaataaatgaaaaacagcaggctctacttaagtttggggaagtt
gaagatgaggagatgcttagtcttcctgatccttctaatggacagtcaccttccagtgtt
caccaacatcaggaggaagaacaaaattgcagtgaaacacaaaatgtcatcagagtctgt
cacactcatgaacgtgcagttcctatccaagaaaccgtggaagctcttgacataacagaa
gaaggtatagagactatgctttgctatctggaattgcaccctcagcactgggtggagttg
ctacaccccacactctcctcttgtcatttggtttgctacagtggaccccagcagcttcga
gctattgccaagatttgtcccccagttgcagtagcacttgctcggaagaggctggctggc
gagagcctttcccactcgagttcagtgacattcgatgtggtggaactggcagactctatg
ggctgggagcttattccagtcaaaagaactctccggcaactccagtggaagactgagaga
ggtcccccaggctttagagggacaggaaagagtggtgtcctggtggagttctccagtttg
tccttccacttccgttcttatggagatctaactcaccaggaaatggacagcatttgtgag
ttcttacaccagagaattcaggctcaagagaagactcagctgtatcagctaaaagcttgc
tttaaggccttctttagtgttgcttaccgtagctctacttcttgttctgataagatggat
gatgacaggagccaaaagctgaaggccttgctaatgaactactttgacaagaaggctgaa
ctggatctaagcaaaaagtatgaagaggataaagaggactgtgaacttagtaaatataag
ttaaaagactgggaggatcagattcgtgcagacataagaagtttcctttcaactcacaat
gaagaaaagttttctggaagagcaatagccagaatatttcatggaattggaagtccttgt
tatcctgcattgacttatggaaaagacagaagattctggagaaaatatattaattttgat
ttcaatgaaatcatcagaatggcaactgaggaaattataagaaccaatattgattag
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integrated database retrieval system
