Polypterus senegalus (gray bichir): 120516032
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Entry
120516032 CDS
T08668
Name
(RefSeq) sorbin and SH3 domain-containing protein 1 isoform X1
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03320
PPAR signaling pathway
psex04520
Adherens junction
psex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120516032
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120516032
03320 PPAR signaling pathway
120516032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120516032
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
120516032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
120516032
NCBI-ProteinID:
XP_039593396
LinkDB
All DBs
Position
1:326041663..326205745
Genome browser
AA seq
1944 aa
AA seq
DB search
MKVLDTADKHCRSRHPWKAMAPLTEKGDKREDQKIEVQKRSSTFTMSTEHEASVSSSIIN
GVSTTISKEQDRAADYPARTRSVSAVKITPVKRVKSSPALMLVTGTDPSKVCAGKGTVTL
HTSSTHSNLAACTLEPTDVEQETQDTEALDSDVDAWTTACCDANGDSTTSSLAAKGFRSV
RPNLQSQKSPQSPPSLACRPLTNQSPSFLSLAPGTDCLYMSYPKPYVPAATPDFCSGQLM
SQSPSLGERAFQQHIGVQALSMNSASAAPKYPVHAKQQETLVTVAPLTADTSHPEDSIKK
KVTSLYVACLSNSTCSPEVAEASKAPARMDTEDTQSAPPPIPPRPFLAKEPLIMWQPQES
LKMCMPAPAIPVSEALMEQQCLKSSQQPGMDPSGQEKKSGRVEPSVIPEAFPPSSSSTTR
SYFPSAGKPSSAYPSTTIVNPTIVLLQHNREQQKRLNSLADPLAECPSVLPDGHSEQTDM
EDRNRPRMKLLQDIGSSSLDGIGIPMRNTERSKDWYKTMFKQIHKIKDSPEENPYHPTYI
FPEPTEKQSRIEEDNQYVPTYQFPESPPSTNVKVENTYTPTYIFSEVARRFQAEDDDSDS
YSPRQSYSEDVRSPPYVPRSKSAADIIDTEVPVKRSATLPLPTRSSSLKPSSDRNEWEPS
DKKVDTRKYRAEPRSIFEYEPGKSSVLNHEKTTRDISPEEIDLENEPWYKFFSEMEFGRP
PPKKIWDYTPGDCSILSLEDRQSAPLSPLESQPELQQYSMHMSNHNETPRESDPMAGDHV
GSDNERLIYKSVLEGGDIPLQGLSGLNKRPSSSSSTKVDHKGGNAYIISPSSINSRTLIS
SYALGTKCKPKTPLFAAKACISEILPSKFKPRFVPPVACMQEREPPVSVHIKAQSCEDLH
DGSACYNGRRAEMIQSTESLVLKEMGELGRRSGSASSLQEYGSCARKRFIPPRRNAAEFS
AMYKNMHHINRQDLQRGSGGSGSVRNIACQFEQEQKAQSEPGGGGPDEPGEIPRHTVSSR
VNEFEQIIQRSRSLPTLDTGGKSPSPTLCRPHLSSAFSAESLLEPQSRAKEEEEETDVKI
LVKSASLSGSDAEDPASSEYSDLMPIDSLSTCTDNEVDRLSNASAESSNSSVHHTHRLKA
SKCKGSCPASYTRFTTIRRHELQMAKAEAKLASQESRNLFPRNLFLMGPQPFRLKKPPQQ
DPKRKMCPTAAPCHSAQPPELAKESNLKEERADSEDGSYPEDRPLIPQRQSSLEAVERLS
HQNNGDKPQEEPYDCIANGNGTPNSLDSNNNPEHKMAIFLRDSDSLRHFAPVEHVDTPEE
IARRRYDDKEKLLEEQRRLKREQEEADIASRRHTGLFLTHHQFITNDRFGDLLNTDDADK
RKSGSEVCSSHLNAPLDPKQDLPLTLCCTMAPARAQYDFKAQTLKELPFQKGDIVYIYRQ
IDQNWYEGEHHGRVGIFPRTYVELLPPTEKAQPKKTPPVQVLEYGEAMAKFSFTGDTPVE
MSFRKGERITLIRRVDENWYEGKISGTNRQGIFPVTYVDVIKRPRVKNSVEYPDPPMSRS
PNRSSTASPQSNYSRLLSPTPPLSSVRRAVTPDVQAITSEWISLTMGVSCNSPSAVTPPL
PPLPEGFSVCGDYLSPSAAASPTPSVSIPYYSLSGSSTPRSATSPPPPYPPRPYSFTPSI
TCTPPKGEEHRLAFHSPTSPCHSPTAMSSSHTPSPDFTKAPSPEQKLFSIELEDDKLCQE
LLNIVHGESASGGTNHTLSMAGPLSSNEKNADNYRESHSPPLPPPKAASLAYFQPSATQG
RPQPSIGAGTTMCQPLKNDVIYPGVTSRSPVLSTDFPASMMNTNSYAPSHQPLRTGPDLT
DSEKSYVQPQAQQRGSTPDRPQIISEVFQAMYSYVPQNDDELELREGDIVNVMEKCDDGW
FVGTSRRTRQFGTFPGNYVKPIQI
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgctggacacagctgataaacactgtaggtcaaggcatccctggaaggcaatg
gcccctttaacagagaaaggtgacaaaagggaggaccaaaaaattgaagtgcagaaaaga
agctctaccttcacaatgagtacagagcatgaagcctccgtgtcttcatccatcataaat
ggcgtatctactaccattagcaaagagcaggacagggcggctgactaccctgctcgtaca
cgatctgtctctgcagtaaaaataaccccagtgaagagagtgaaaagttctcctgcccta
atgctggtgacaggcacagatccttctaaggtttgtgcaggcaaagggactgtgacactg
cacacatctagcactcacagtaatctggcagcctgcactttggagcccacggatgttgag
caagaaacacaggatacagaagccctggacagtgacgtagatgcctggacgactgcttgc
tgtgatgcaaatggagacagcaccacctcatcactggcagctaagggattcagaagcgtt
cgacccaaccttcagtcacagaaatccccccagtctccacctagcttggcatgccgtcct
ttgactaaccaaagtccatccttcctttccctcgctccaggcacagactgtttgtacatg
agctaccccaaaccgtatgtgcctgcagcaacacctgatttttgcagtgggcagctaatg
tcacaaagccccagtctaggtgaaagggcttttcaacaacacataggtgtgcaggctttg
tccatgaacagtgctagtgctgctcccaagtaccccgtgcacgctaagcaacaggagaca
ttggtgactgtagcaccactgaccgctgacacctcccatccagaggatagcattaagaag
aaggtcaccagcctgtatgtagcttgtttgtctaacagcacttgctcacctgaagtggcg
gaagcttccaaagccccagcacgtatggacacagaagacacccaaagtgcaccccctcct
attccccccagacctttcttagcaaaggagcccctgataatgtggcagccacaggagtcc
ttgaagatgtgcatgccagctccagcaatcccagtcagtgaagccctgatggagcagcag
tgccttaaatcaagccaacagcctggcatggatcccagtgggcaggagaagaagagtggc
agggtggaaccatctgtgattcctgaagctttcccacctagctcaagttccacaactcgc
tcatactttccttcagcaggcaagccttcctctgcttatccatccacaacaattgtaaac
ccaaccatagtgcttttacagcacaacagagaacaacaaaaacggcttaatagtttggca
gatcctttagcagaatgccccagtgtcctgcctgatgggcacagtgaacagactgatatg
gaggacaggaaccgcccaagaatgaagctcctgcaggacataggaagcagttcactggat
gggataggcatacccatgaggaatacagagagatccaaggactggtacaagacaatgttt
aagcagattcacaagataaaagattctcctgaagaaaacccttatcatcctacctatata
tttcctgagcccactgaaaagcagagcagaatagaagaagacaaccaatatgttccaacc
taccagtttccagagagtccacctagtacaaatgtgaaagtggagaacacttacacacca
acctacattttctcggaggtggcaagaaggttccaagctgaagatgatgactcggattct
tactctcccagacagtcatattcagaagatgtgagaagtccaccatatgtgccaagatca
aaaagtgctgcagacattattgacactgaggtccctgtgaagcggtcagctactcttcct
ctgcccacccgctcatcctctctgaagccttcctctgaccggaacgagtgggagccttca
gataagaaggttgataccaggaaataccgtgcagagccaaggagtatctttgaatatgaa
ccgggcaaatcttcagtgctgaaccacgagaaaacgactcgggatataagcccagaagaa
atagatttagagaatgaaccttggtataaattcttttcagagatggagtttggaagaccg
cctccaaaaaagatctgggattatactccaggcgattgctctattctttcgctggaggat
agacagagtgcacctctcagccccctggaaagccagccagagctccagcaatactcaatg
catatgtccaatcataatgagacaccaagagaatcagatccaatggctggtgaccatgtg
ggctctgacaacgaacgtcttatttacaaaagcgttctggaaggcggtgacattcccctg
caagggttaagtggtttgaacaaacggccttccagctcatcctctacaaaagtggatcat
aaaggtgggaatgcttacatcatttcaccttcttccataaatagcagaacacttatttct
agctatgctttaggtactaaatgtaagccaaagacgccactgtttgctgcaaaagcctgt
atctctgaaatcctgccatccaaattcaagcccagatttgtgccccctgtggcctgcatg
caggagcgagaacctcctgtctcagtgcacattaaagcccaaagctgtgaagacctgcat
gatggatcagcctgctataatggccgcagggctgagatgatccaaagcacagagtcgcta
gtcttaaaggagatgggcgagttgggaaggagaagtggcagcgccagcagcctacaggag
tatggctcttgcgcacgaaagcggtttataccgcctcgcaggaatgccgcagagttcagt
gccatgtacaaaaacatgcaccacatcaaccgacaggacctgcagagaggaagtggaggc
agtggtagcgttcggaacattgcttgccagtttgaacaggagcagaaggcacagagtgag
ccagggggcggtggtccagatgagccaggcgagataccacggcacactgtgtcctctcga
gtgaatgaatttgaacagatcatccagaggtcaaggtctttaccaacactggatactgga
ggaaagagcccaagcccaacactgtgcagaccgcacttgagctcggctttctcagcagag
tcacttctggaaccgcaaagcagagctaaagaggaggaggaggagactgacgttaaaatc
cttgtgaagagtgcatctctgtctgggagtgatgctgaagatcctgcgtcctcagagtac
agtgatttgatgcccatagattctctctcaacctgcacagacaatgaagtggatcggctt
tccaatgcctctgctgagagttccaacagcagcgtccaccatacacatagactgaaagca
agcaaatgcaagggctcctgtcctgcctcctacacaaggtttacaaccatccggcggcat
gaactacagatggctaaggccgaagccaaactcgcttcccaagagagcagaaacctcttt
cccagaaacctattcctgatgggaccacagcccttccggcttaagaagccaccccagcag
gacccaaagaggaagatgtgtcccacagcagcaccctgtcactctgcacagccacctgag
ttggcaaaggaaagtaacctgaaggaagaaagagcagactctgaagatggctcctaccca
gaggaccggcctctcattcctcagcggcagtcctctctggaggcagtggaacgactgagc
catcagaacaatggggacaagccacaggaagagccgtatgactgcattgcaaatggcaac
ggcacacctaacagcctggactccaacaacaatcctgaacacaagatggccatttttctc
agagattctgactctctgcgccattttgctccagtggagcacgtggatacacctgaagaa
attgcccgcaggcgctacgatgacaaagagaaacttttagaggagcagagaaggcttaag
cgtgaacaagaagaagctgatattgcatctagaaggcatacaggactctttctaacacat
catcagtttatcactaatgatcgttttggagatcttcttaacactgacgatgcagataag
aggaaatctgggtccgaggtctgttccagtcacctcaatgctccgcttgacccaaagcaa
gatttgcctctcacactgtgttgcactatggcccctgccagggcacaatatgattttaaa
gcacagactttgaaggagttgccctttcaaaaaggagacatagtctacatttatagacag
attgatcagaactggtacgaaggggagcaccacggaagagttgggatcttccctcggaca
tatgtggagctgctcccacctactgagaaagcacaaccaaagaagactccgccagtacaa
gtgctggagtatggagaagccatggctaagttcagcttcactggagacacgcctgtagaa
atgtccttccgcaagggagagaggatcacattgatccgaagagtggacgaaaactggtat
gagggcaaaatctcaggaaccaataggcagggaattttcccagtgacatacgtcgatgtg
ataaagagaccacgcgtgaagaattctgtggagtatccagatccacctatgagccgctct
ccaaaccgcagctccactgcatcaccgcagtctaattacagcaggcttctttcacctact
ccccctctttcatctgtacgtagagcagtcacccctgacgtccaggctatcacttcagag
tggatttccctgactatgggggtatcttgcaacagcccctctgcagttactccacctctg
cctcctctcccagagggtttttctgtatgtggggactacctctctccatcagcggcagct
agtcctacaccttcggtcagcatcccttactatagcctttccggcagctccacaccacgc
tctgccacctccccgcctccaccttacccaccacgcccctactccttcacacccagcatc
acctgcacccctcccaagggagaagagcatcggcttgcctttcattcacccacttcccca
tgtcattcaccaactgccatgagcagctcgcatacaccctctcctgatttcaccaaggcc
cctagtccagagcagaagctgttttctattgagcttgaagatgacaagctgtgccaggag
ctgctcaatattgtgcatggggagagtgcttcaggaggcacgaatcacacactcagcatg
gcaggcccactgagtagcaatgaaaagaatgctgacaattacagagaaagccatagccct
cctcttccaccaccaaaggccgcctctctggcttatttccaaccttctgccacacagggc
agacctcagccctcaatcggagctgggaccaccatgtgccagcccctgaaaaacgatgtc
atctacccaggtgtgacttcgagaagtcctgttctgtccaccgactttccagcaagcatg
atgaacacaaactcctacgctccttcccatcagccactgagaacgggacctgatctcaca
gactctgaaaagagttatgtgcaaccccaggctcagcaacgagggagcaccccagaccga
cctcagatcatcagtgaagtcttccaggctatgtatagctatgtgccacagaacgatgat
gaactcgagctccgggagggcgacattgtaaacgtcatggaaaagtgcgatgatggctgg
tttgttggtacttccagaagaacaagacagtttggcacctttcctggcaactatgtgaag
cccattcagatataa
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integrated database retrieval system
