Polypterus senegalus (gray bichir): 120516061
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Entry
120516061 CDS
T08668
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120516061 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120516061 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120516061 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120516061
NCBI-ProteinID:
XP_039593446
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All DBs
Position
1:326222467..326295845
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AA seq
328 aa
AA seq
DB search
MQVRVVIQGPSPWGFRLVGGKDFDQPLTISRVSPGSKAAEANLCIGDMILSINGEQTESM
THLEAQNKIKNCIDEMVLTIDRSESKIWTPMVSEDGKTNPYKMNLASEPQEVKHIGIAHN
RSAMPFSSGSASSTSPKVVTNQYNSPAGLYSSDNIKKFNTALEAKTVPAASPEPNKTLEV
HKPPTKVAVDTGSEVYKMLQENQEAAEPPRQSASFKVLQEILESDEKGEGDKPSGFRSVR
APITKIGGSVGNADKLPVCDKCGSGIVGVFIKLRQMFVHPECYTCSDCGMNLKQKGHFFV
EDKIYCEKHARERVTPPEGYDVVTVFPK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgcgtggtgatacaagggccgagtccttggggcttcaggctagtgggaggc
aaggatttcgaccaacccctgactatttcacgggtatcccctggaagcaaagctgcagaa
gctaacctgtgcataggagacatgattctgtctattaatggagaacaaactgagagcatg
actcacttggaagctcaaaataagatcaaaaactgcattgatgagatggtgcttacaatt
gacaggtctgaatcaaagatttggactccgatggtctcggaagatggcaaaacaaatcca
tacaaaatgaatttagccagtgagccacaggaggtgaaacacataggaattgctcacaac
cggagtgcaatgccattttcttccggttcagcttccagcaccagtccaaaagttgtaaca
aatcagtacaacagccctgcaggtctatactcctctgataatataaagaaattcaacact
gccttggaggctaagactgttcctgctgcatctccggagccaaataaaactttagaagtg
cataaacctcccacaaaagtagcagtggatacaggctctgaagtctataaaatgctccag
gaaaatcaagaggcagctgaacctcctcgacagtctgcctcattcaaagtattgcaggag
attttggagtctgatgagaaaggggaaggtgataagccatctggtttccgaagtgtgagg
gccccgatcacaaaaattggtggatctgttgggaatgcagacaagctaccagtctgtgac
aaatgtggatctggtattgtgggtgtttttataaagctgagacagatgtttgtccatccc
gaatgctacacatgctcagactgcggcatgaacctgaagcagaagggccacttctttgtg
gaagataagatctactgtgagaagcatgccagggaacgggtaactccccctgaaggctat
gacgttgttaccgtgtttcccaaataa
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