Polypterus senegalus (gray bichir): 120516128
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Entry
120516128 CDS
T08668
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120516128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120516128
Transporters [BR:
psex02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120516128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA_28
Rad17
AAA_30
AAA_7
AAA_29
G-alpha
AAA_21
Zeta_toxin
APS_kinase
DUF1440
Motif
Other DBs
NCBI-GeneID:
120516128
NCBI-ProteinID:
XP_039593520
LinkDB
All DBs
Position
15:complement(54292902..54799585)
Genome browser
AA seq
1311 aa
AA seq
DB search
MSEEGKRNTENEDSIVHVYDNPSFQKEEENEVEFSENVSKKKKKKNKKEELAKSVGIFQL
FHYADTLDIILMIIGLVCSAAHGIALPIMIIVFGEMTDSFVSSGIQVNITVNSTLNASSS
DCPQVTGVDIQAAMTRYAYYFIAIGFSVLVLATIQIATFLLSSSRQTQRIREKFFYAVLH
QHMGWFDTHELGTLNTRLTDDVNKIKEGLGDKICIFLQFFCTFISGIIIGFVYGWKLTLV
ILSVSPLIGVSAAVWSKVLATLTSKELTSYAKAGAIAEEVLVAIRTVVAFNGQHKASERY
EANLVEAKQLGVKKSITTNVSLGLSQFFIFCAYALAFWYGTKLAIEEPENYSIGKVLIVF
FSVIIGTFSLGQASPNLESIASARGAAYEVYKTIDEPRPIDSGSKEGHKPDRIKGDIEFK
NIRFSYPTRPDVKILQGLNLKVQSGTTIALVGASGCGKSTTIQLLQRFYDPLGGEITLDG
QDIRTLNVKWLRENIGIVSQEPVLFATTIAENIRYGREDATDAEIEQAIKEANAYDFISK
LPDGLNTMVGERGAQLSGGQKQRIAIARAIVKNPKILLLDEATSALDNQSEYIVQTALDK
ARAGRTTIVIAHRLSTIRTADIIAGFQNGVVCEQGTHSELMEKKGLYYSLVMQQSMKSKD
EDNEYESDEMDETEDELEVLENENAGDSEIKSTRSLSRRSIRRRSTARGSRRSLKKKQKE
GEEDENLPEASFLRILSLNKKEWHYLMVGLLASLICGAVYPCFGIIFAKIIGVFAETDPV
VKSQKTILFSLLFLLLGAILLVAMSLQGYTFGVSGETLTLKLRSLSFKAILRQEISFFDD
HKNSVGVLITRLATDASLVKGAGGSRLGLAIQSICSLLIAVIVAFVFSWQLTLLILACIP
FLVGANFIRMKSVAGHASKDQSALEASGKISTETVENIRTVVSLTREEIFFKMYCKSLRG
PYRAELYKSPLYGLTYAIGQSINFFVNAAVFRLGSWLIAHCQTQFENMYIVFSVIVFAAM
QVGQSSSFAPDLGKAKVSAQRIFALLEKKPKIDIYSTEGRKLDHFDGNIEFQDVHFAYPT
RKKVQVLQGLNVKVSKGQTLALVGSSGCGKSTSVQLLERFYDPINGHVLVDGNDITSLNL
AWLRSQIGIVSQEPILFDTSIAENIRYGDNSRSVTQEEIEEAAKKANIHSFIEDLPQKYS
TKVGDKGAQLSGGQKQRIAIARALLRNPKVLLLDEATSALDTESEKIVQEALDEARQGRT
CIIIAHRLSTIQNADIIAVISNGEVVEQGTHSELIAKGGAYYALANAQSGH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaggtaaacgaaacacagaaaatgaggattctattgtccatgtgtatgac
aacccatcattccaaaaagaagaagaaaatgaagtggaattttcagaaaatgtcagcaaa
aagaaaaagaagaaaaataaaaaagaagaacttgcaaagtcagtgggaatattccagctg
ttccactatgctgatactttggatatcatattgatgataataggtttagtctgctctgca
gcacatggcattgcactaccgattatgatcattgtgtttggagaaatgactgatagtttt
gtcagcagtggcatacaagtaaatatcacagtaaactccacactgaatgcaagtagctca
gactgccctcaagtgactggggtggatattcaagcagctatgacaagatatgcatattac
ttcatcgccattggattttctgtgttagttcttgctacaattcagatagcaacgtttctg
ctcagctcttcaagacagacacaaaggatccgtgaaaaattcttttatgcagttcttcat
caacacatgggctggtttgatacacatgagttaggaacattaaacacaagactgactgat
gatgttaataaaataaaagaaggccttggagacaaaatctgtatctttcttcagttcttc
tgtaccttcatatcagggataatcataggatttgtctatggatggaagcttacattggtt
attttgtcggtcagccctctcattggagtatcagcagctgtgtggtcaaaggttctggcc
actttgacttcaaaagaactaacatcctatgcaaaggcaggtgcaatcgctgaagaagtt
ctggttgcaatacgaactgttgttgctttcaatggacaacataaagcttctgaaagatat
gaagcaaatttggtagaagctaaacagcttggagtgaaaaagtccataacaacaaatgta
tcacttggattgtcacagttctttatattttgtgcttatgctctggcattttggtatggg
acaaagcttgccattgaagaacctgaaaattattctattgggaaagtacttattgtgttc
ttttctgtgatcattgggacattttcactgggtcaggcttcacccaatttagaaagcata
gcaagtgctcgtggagctgcatatgaagtgtacaaaacaatcgatgagccacggccaatt
gacagcggttctaaagaaggacacaaaccagatcggataaaaggtgacattgaattcaag
aatattcgttttagctatccaacaaggcctgatgtaaagattttgcagggattgaatctg
aaagtgcaaagtggaacaacaattgccttggttggagccagtggctgtggaaaaagtaca
acaattcaacttctacaacgattctatgaccctctaggtggagaaatcactcttgatgga
caagacattcgcacccttaatgtcaaatggctaagggagaatattggtatagtaagtcaa
gaaccagtgctttttgccacaaccattgcagaaaatatacgatatggcagagaagatgca
acagatgcagaaattgagcaagcaattaaagaggccaatgcctatgattttatatctaag
cttcctgatggcttaaataccatggttggggaaagaggggcacagctaagtggaggacag
aagcagaggattgccattgctcgggctattgtcaagaatccaaaaattcttctcttggat
gaagcaacctcagccctcgataatcagagtgaatatattgtccagacagctttagataag
gcaagagctggtcggactacaattgttattgctcatcgattatctacaatcagaacagct
gatattattgctgggtttcaaaatggagttgtttgtgagcaaggaacccacagtgagcta
atggaaaaaaaaggattgtactactcccttgtcatgcagcagagtatgaaaagcaaagat
gaagataacgagtatgagtctgatgagatggatgaaacagaagatgaactagaagttctt
gaaaatgagaatgctggtgattctgaaattaaaagcacaagaagtctcagcaggagatca
atacgacggagatctacagctagaggttccagacgatcactaaagaagaaacaaaaggaa
ggagaggaagatgaaaatctccctgaggcatcatttcttagaatactatctctaaataaa
aaagagtggcactacttaatggttggactgctggcttctttaatttgtggagccgtgtat
ccatgttttgggataatatttgcaaagattattggagtgtttgctgagactgatcctgtg
gtaaagagtcaaaaaacaatcctgttttcactcctatttctgctgcttggtgcaatttta
ttagtggcaatgtccttgcagggatacacatttggagtgtctggtgagactctgactttg
aaactgagatcactttcttttaaagcaatattgagacaagagatcagtttttttgatgat
cataagaatagtgtgggcgttttgataacaagacttgcaactgatgcctctcttgtcaaa
ggggctggtggttcaagacttggactagctattcaatccatctgtagtcttttaattgct
gtaatcgtcgcatttgtatttagctggcagttaactctccttatcttagcctgcattcca
tttcttgttggagccaacttcattcgaatgaaatctgtggctggccatgcttccaaggat
caaagtgctctagaagcctctggaaagatttccacagaaactgttgaaaatatcagaact
gttgtgtcattaacacgtgaagaaatatttttcaaaatgtactgcaaaagtctaagaggt
ccatacagggcagaactgtataaatcgccactctatggtctaacttatgctattggccag
tcaattaacttttttgtaaatgctgcagttttccgattaggatcatggcttattgcacat
tgccaaacacaatttgaaaatatgtatatagttttctctgtaattgtatttgcggcaatg
caagttggacagtcatcatcttttgcaccagatttgggtaaagctaaagtatcagcccag
agaatatttgctctactagagaagaagccaaagattgacatatatagtactgaaggtcga
aaactggatcatttcgatggcaacattgaattccaagatgtccactttgcttaccctact
agaaaaaaagtacaggtgttgcaaggacttaatgtgaaggtttccaaaggacaaacactt
gcactggtgggaagtagtggatgtgggaaaagcacttctgttcagcttcttgaaagattt
tatgatccaattaatggacacgtgcttgtagatggaaatgacattacatctttgaacctt
gcctggttacgatcacaaataggcatagtttcccaagaacccattctgtttgatacatct
attgctgaaaatattagatacggagataacagtagaagcgtgacacaagaagaaattgaa
gaagcagcaaagaaagctaacatccacagttttattgaagatttaccacagaaatacagt
accaaagtgggagacaagggagcacaactttcaggaggacaaaagcagagaattgcgatt
gcacgtgccttgcttcgaaatccaaaggtgctgcttttggatgaggccacatcagcactt
gacacagaaagtgaaaagatagtccaggaggccttggatgaagccaggcaagggcgcact
tgcataattattgcacatcgcttatcgacaattcaaaatgctgacatcattgcagtaatc
agtaatggagaagtagttgagcagggaactcatagtgaactgattgctaaaggtggtgct
tactatgcacttgctaatgctcaaagtggacattag
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