Polypterus senegalus (gray bichir): 120516155
Help
Entry
120516155 CDS
T08668
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120516155 (tshz1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120516155 (tshz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_TSHZ3
zf-C2H2_4
zf-C2H2_2
zf-C2H2
zf-C2H2_6
zf-C2H2_3rep
zf-met
Zap1_zf1
zf-C2HC_2
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120516155
NCBI-ProteinID:
XP_039593565
LinkDB
All DBs
Position
15:132085736..132216006
Genome browser
AA seq
1062 aa
AA seq
DB search
MPRRKQQAPRRSAAYVPEEELKAAEIDEENLQDDGLSLDIQDSEFVCNEEEDSKDIPSYQ
NSPLSTATNQDAGYGSPLSDTSDRLTDFRSTSSKDGHEKEEGATIDNGALLHDSLSKMKA
IYANLISDSSWASITKDLMKSKPPSASTSSNGNSHSGSHTSSNGGGLTYDWHQAALAKTL
QQAPYNILPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVGLTVHMNETG
HYRDDNEDKETDSSKKWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT
KHYQKVPLKEPVPALTSKLVPSTKKRALQDSVSPCSPESTGSTAGVSMGELSKEQKAANP
YVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSA
SKKGKQLVFDPVVEEKIQSIPLPPTTTRLPLPNVKSQPESPAHSSGSEEKKDLEDEQMEL
KEPEKKIKEEKEEPGEKFEPTTPYKYLREEDLDDSPKGGMDILKSLENTVSSAISKAQNG
APTWGGYPSIHAAYQLQGSVKPVQPTVQSIHVQPSFSSSMKTLSTELAAVIHSPGSQSPP
LHRSNVSAMEELVEKVTGKISANKVEKAIEKCKPVLSKPVSPTSKENKDMLKPDDLSSRQ
LKKSSVSEAEPSKVHKEGSLDNHMKNGTESLKSPISNGCNSLGIITDHSPEQPFVNPLSA
LQSIMNTHLGKASKPVSPSLDPLAMLYKISNSMLEKPMYPPTQVKQTEPINRYYYESNDQ
PIDLTKAKNNGSNSNGSSSRPIISSVSESISSPLRENALMDISDMVKNLTGRLTPKSSTP
SSISEKSDADGSTFEDALEELSPVQKRKGRQSNWNPQHLLILQAQFVSSLKETPEGKYVM
TDLGPQERVHICKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNIDSGQPVFLCNDCASQ
FRTPSTYINHLESHLGFSLKDLSKLSLEHIREQQTVAKVITDKTFGSLGFVEEDSGSLFQ
CKLCNRTFASKHAVKLHLSKTHGKSPEDHLVYVNELEKLEKS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagcaccgaggcggtctgcagcatatgtgcctgaggaggag
ctgaaggcagccgaaattgacgaagaaaacctccaggatgatggactgtctctagatatt
caggacagtgagtttgtgtgcaacgaggaggaggatagtaaagatatccccagctaccaa
aactcccctctgagcacagccaccaatcaggatgcaggctatggatcacccctcagcgat
actagtgacaggctgaccgatttcaggagcacttcctcaaaagatggccatgagaaagag
gaaggcgccaccatagacaatggggctttgctacacgacagtttatctaagatgaaagcc
atctatgcaaatttgatctctgattcctcttgggcgagcattaccaaggatttaatgaaa
tccaagccaccgagtgccagcaccagtagcaatggaaacagccacagtgggagtcacacg
tccagcaatgggggaggcctaacctacgactggcaccaggctgccctggccaaaacctta
caacaggccccttacaatatcttgccggagcccagcctgttcagtacagtgcagctttac
cgacagaacaacaaactgtatggttcggtcttcacgggcgccagtaaatttcgatgcaaa
gactgcagtgctgcctatgatactctagtgggcctgacagtgcatatgaatgagactggc
cactaccgggacgacaatgaagacaaggaaacggacagtagcaagaaatggtcaaagccc
aggaagcgctccttaatggagatggaagggaaggaggatgcgcagaaagttctgaagtgc
atgtactgtgggcactcctttgagtcactgcaagacctgagcgtccacatgatcaaaact
aaacattaccagaaagtgcctctaaaggaaccagtgccagctctcacctccaaactggtc
ccctctaccaaaaagcgagcacttcaggactcggtctccccgtgttcccccgagtccacc
ggcagcacagcaggtgtgtccatgggggagctgtcaaaagagcaaaaagccgccaaccct
tacgtgaccccaaacaatcggtatggctatcagaatggtgccagttacacctggcagttt
gaggctcgcaaagcccagatactaaagtgcatggaatgcggtagctcccatgataccttg
caacaacttacggctcacatgatggtgaccggacattttctaaaggttaccaactctgct
tctaaaaaggggaagcaactcgtctttgacccggtggtggaagaaaaaatccagtccatc
cctttgcctccaactacaacgcggctaccattacccaacgtcaagtcgcagccagagtcg
ccagctcattcgtccggctcagaggagaaaaaggatttagaggacgaacagatggagctc
aaggagcctgagaaaaaaatcaaagaggaaaaagaagagcccggggaaaaatttgagcca
actaccccttacaagtacctccgtgaggaagatttagacgacagtccaaaaggtggcatg
gacattctgaagtctctagaaaacaccgtttccagcgcaattagcaaagcccaaaacggt
gccccaacttgggggggatatcctagcattcacgcagcctatcagctccaaggttccgtc
aaacccgttcagccgactgttcagagcattcacgtgcaaccttctttcagcagcagcatg
aaaacgttatcgactgaactcgcggcggtgattcattctcctggtagccagtctcctccg
ctccacaggagcaacgtctcggccatggaggagcttgtggagaaggtcacgggtaaaatt
tcagcaaataaggtggagaaagcgatcgagaaatgcaagcccgtcctgagcaaaccggtg
tctcccacctctaaggaaaataaggacatgcttaaaccggatgacctaagcagcaggcaa
ctgaagaagagtagcgtttcggaagctgagccttccaaggtgcacaaagagggttcgtta
gataatcacatgaaaaatggcacagagtccctcaagtcacccatcagtaatggttgcaac
agtttgggaatcattacagaccattcaccagagcagccttttgttaaccccttaagcgca
ttgcaatcgattatgaacacccatctaggcaaagcttcaaagcccgtcagtcccagtttg
gaccccttggcaatgttgtacaaaattagcaacagcatgttagagaaacccatgtaccct
ccaactcaggttaagcaaacggaacccatcaacaggtactattacgaaagcaatgatcag
cccattgacttgaccaaggccaagaataacggcagcaattcgaacggcagcagcagtcga
cccatcatctccagtgtgtctgaatcaatttcttccccactgagggaaaatgcactgatg
gacatatcggatatggtgaagaacctgaccgggcgcttgacccccaagtcatccacacca
tcgtccatctccgaaaagtccgatgctgacgggagcacctttgaggacgctttggaagag
ctttcccccgttcagaagcggaaggggagacagtccaactggaacccgcagcatcttctg
attcttcaggcccagtttgtctcgagtctgaaggagacgccggaaggcaaatacgtaatg
actgacttgggccctcaggagcgtgtccacatttgcaagtttacgggtctctccatgacc
actattagccattggctagccaacgttaagtaccagttgaggaggacaggtggaaccaag
ttcctaaagaatattgattcaggtcaacccgtcttcctctgcaatgattgtgcctctcag
ttcaggactccttccacgtacataaaccacttggagtctcacctaggcttcagtctcaag
gacctctccaaactgtccctagagcatatccgggagcagcagactgtcgccaaggtcatc
acggacaagacttttgggtctctggggttcgtcgaggaggactcaggctccctattccag
tgtaaactgtgcaacaggacttttgctagcaagcatgcagtgaaactgcaccttagtaaa
acacatggcaagtcaccagaggaccatctggtgtatgtgaatgaactagaaaaactagag
aaatcgtaa
DBGET
integrated database retrieval system
