Polypterus senegalus (gray bichir): 120516180
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Entry
120516180 CDS
T08668
Symbol
hoxa5a
Name
(RefSeq) homeobox protein Hox-A5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120516180 (hoxa5a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120516180 (hoxa5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
DUF739
Motif
Other DBs
NCBI-GeneID:
120516180
NCBI-ProteinID:
XP_039593602
LinkDB
All DBs
Position
15:49438333..49441763
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AA seq
273 aa
AA seq
DB search
MSSYFVNSFCGRYPNGPDYPLHNYGDHSSMNEQYRESASMHSTRYGYGYNGMDLSVGRST
SSHFGANDRAPSYASSATTASSENRYSQAAAASSHSPPPDSLPCSTVARSPAGEAHRAVK
NSISDPTSTSSTSNNSCSTLLGREGAGKSSGTEDDSTARSGQTNSQNSQNAVESSQPQIY
PWMRKLHISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSER
QIKIWFQNRRMKWKKDNKLKSMSMATAGGAFRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttattttgtaaactcgttctgcggtcgctatcctaatggcccggactatccg
ttacataattatggcgatcatagctcgatgaacgagcagtacagggaatcggcgagtatg
cattccaccaggtacggctacgggtacaatgggatggatcttagtgttggtcgctcaaca
tcgagtcactttggtgctaatgatagagctccaagctatgcatctagtgcaacaacagca
tcttcagaaaacaggtacagccaagccgcagcagcatcatctcactcgcctccacctgac
tcactaccttgttcaaccgttgcgcgctcgcctgctggcgaggcacaccgagctgtaaaa
aactcaatatctgaccccacaagcacttcctctacttcaaacaacagctgtagcaccctc
ttaggcagagaaggtgctggcaagtcttctggtactgaggacgactctacggcaagaagc
ggacagacaaattcacagaacagccaaaatgcagtcgaatcatcacagccacagatatat
ccgtggatgcgaaagttgcatattagtcacgatagcatggcaggaccggaaggaaagaga
gcaagaactgcctacacgcggtatcagacgctggagttggagaaagaatttcacttcaat
aggtacctgacccggagacgaaggattgaaattgcacatgctctgtgcctctcagagagg
caaattaagatatggttccaaaacagaagaatgaaatggaaaaaagataataagctgaaa
agtatgagcatggcaactgcaggaggtgcatttcgtccttaa
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