Polypterus senegalus (gray bichir): 120516233
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Entry
120516233 CDS
T08668
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120516233 (npas4l)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120516233 (npas4l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
120516233
NCBI-ProteinID:
XP_039593678
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Position
16:complement(20781401..20796554)
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AA seq
797 aa
AA seq
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MTVSCRNFITPDAAQPEDPQRKPGCFAARTVTAERTTLKPFRSTKGASKARRDHINTEIR
NMRALLPISEEEKEHLSYLHTMSVVCAYIRKSLLWQGIQRESEATSPIPHEDFLQALPGF
VVAVSSEGKLTYISDNVTEYLGISRVDLLQNDSFYDLIEHTDQASVKEKLHSDSSLEGEI
SFVCHMHTSKAFRMKHGNNSSVLVQGRFQNMSLVMNSSPVFIALCTPTVNRLQDFETCLW
VNQFKTLHHLDMKFAEVPKSLFCHLGYSAEELADQSWYHLLHPDDLKVAVIKHKMLLQRN
EVSNVEMVVRLHHKVRDWTWVYVRALYVSDSQSVACTTFIISEAEALFLRPYIHPEEENS
YVCHNILNPSIQNISQRCRGQAFGIKRHQDTRNSDEEPMAKVIRSSLPSVCIYSPFVDSS
ERSFSSDVLHETPLSCTPPYSPSSDCSSFQSEDIHSSYFLYQDSIANSQVEGDRSLESFE
NLHSYYPVEVNNEPLVEPVDLVTIQPSSLEDVLSTDSALISEINSEGGRQCRLFPYDFSK
SSDEAQLVPDSITLPEMSAGVSDFNFYIDPFSIPENFQESTDSYASYTNTAVFVPPAGIL
TTEVSPAEQNSFQYSEEERTEISLLARQISSLASSFDIYKLMLPALKESATYLSVNITPQ
LQHAYSSPGLITSAPDSVLDDSVIKSILKNLDTVPQLNTGTMSAAICPDAESSHATFTDK
TQLHHTTLDSSTERSRSFSMGILDTSLGLGELCRDPPAGDSCALKPSCVCCPNELHQLDV
YLNSNQERGDLDEDFTY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgagctgcagaaacttcatcactcccgatgctgcccaacccgaggatccccag
cgcaaaccgggatgcttcgccgcaaggacagtcactgcggaaaggaccactttaaagcct
ttcagatcaaccaaaggagcatccaaggctagaagagaccacattaacacagaaatcagg
aacatgcgagctttgcttcccatctccgaagaagaaaaggaacatctgtcctacctgcac
accatgtccgttgtctgtgcctacatcagaaagtctttgctatggcaagggattcaaagg
gaaagtgaagcaacatctccaattccacacgaagacttcctacaagctcttcctggtttt
gttgttgctgtgtcaagtgagggaaaactgacgtatatctcggataacgtgacagaatat
cttggtatctccagggtggatttattgcaaaatgatagtttttatgacctcattgaacat
actgatcaggcatcggtaaaggaaaagcttcattcagattcttcactggaaggagaaatc
tcttttgtgtgtcacatgcacacttctaaggcattccgtatgaagcatggcaataacagt
tcagtgctggtccagggcaggtttcaaaacatgtctctggtcatgaattccagtccagtt
ttcattgccctgtgcacccctactgtaaaccggctgcaagatttcgaaacttgtttgtgg
gtgaatcagttcaaaacgcttcatcacctggatatgaagtttgctgaagtccctaagagt
ttgttttgccatcttggatattctgcagaagagctcgctgatcaatcttggtaccatctg
cttcatcctgatgatctcaaagtggctgtgatcaaacataaaatgctgttacaaaggaat
gaagtatcaaatgttgaaatggtcgtccggctccaccacaaggttcgtgactggacctgg
gtctacgttagagccctctatgtgtcagacagccagtcagtggcatgtaccaccttcatc
attagtgaagcagaggccttgttcctgcgtccatatattcacccagaagaagagaacagt
tatgtttgtcataatattttgaatccatcgatccagaacattagtcaaagatgcagaggg
caagcatttggtataaagagacaccaggatacaagaaattcagatgaagagccaatggcc
aaagtaatcaggagctccttgcctagcgtttgcatatattctccttttgtggactcgtcg
gaaagaagcttttcaagtgacgtgctgcatgagacacctttatcctgcactccaccctac
agccctagttcagactgttcttctttccagtccgaagacattcattcatcatatttttta
tatcaagattccattgcaaattctcaagttgaaggtgacagatcgttggaatccttcgaa
aacctacactcttactaccccgttgaggttaacaatgagcccctggtggagcctgttgac
ttagtgactatacagccttcctctctggaagatgtactgagtacggacagtgccttgata
tccgaaataaacagcgaaggggggagacaatgtcgcttatttccgtatgatttctcaaaa
agttcggatgaggctcagcttgtccccgacagcattactctcccagagatgtcagctggc
gtatcagactttaatttttacatcgaccctttcagcattcctgaaaactttcaagaaagc
accgactcttacgcttcatacaccaatacagcagtgtttgtacctcctgccggtattctg
actacagaagtgtcacccgcagaacaaaactcatttcagtacagtgaggaagaacggacg
gagatcagccttcttgcgaggcaaatctcttcattagcttcaagctttgatatatataag
ttaatgttaccggctctaaaggaaagtgccacttatctgtcggtgaatattacacctcag
cttcaacatgcctacagctcccccggcttgattacatctgcaccagattctgtactggac
gacagcgtgataaagagtatattgaaaaatcttgatacagtgccacaactaaacactggc
acaatgtcggctgccatctgcccagacgctgaatcttcgcatgcgacattcaccgacaaa
actcaattacaccatacaaccttggatagcagcactgaaagatctcgtagtttttcaatg
gggatcctggataccagtctcggactgggtgaattgtgcagagaccccccagcaggcgac
tcctgcgcgctgaagccctcgtgtgtgtgttgtcctaatgaattgcatcaactagatgtc
tacctgaacagtaaccaggagcgaggtgaccttgatgaagattttacatactga
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