Polypterus senegalus (gray bichir): 120516259
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Entry
120516259 CDS
T08668
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04145
Phagosome
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120516259 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120516259 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120516259 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120516259 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516259 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120516259 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
psex00536
]
120516259 (thbs2a)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Phagocytosis
Opsonins
120516259 (thbs2a)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120516259 (thbs2a)
Exosomal proteins of colorectal cancer cells
120516259 (thbs2a)
Exosomal proteins of bladder cancer cells
120516259 (thbs2a)
Glycosaminoglycan binding proteins [BR:
psex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120516259 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
EGF
Laminin_G_3
TSP1_CCN
CtIP_N
Motif
Other DBs
NCBI-GeneID:
120516259
NCBI-ProteinID:
XP_039593715
LinkDB
All DBs
Position
16:37968319..38041835
Genome browser
AA seq
1191 aa
AA seq
DB search
MVRWSRLLLLLIHICFCGFVQAQDGDLEEEFEFDLFEISNINRKTLGAKLFRGPDLLSPA
YRFIRFDHIPPVEQKTLNQILKLIQNNEGFVLTATLRQDKGSRGTLIFMEGPDASQRQFE
IVSNGRANTLDMVYWVEGSQNVISFEYVDLSDSHWKNITIQVQGENANFYVGCSLIDSII
LDEPFYEHLKSGIGSRMYVAKGAYREDHFRGLLQNVRFIFDTSIDDILRNKGCDVNAPAE
VKTEGIVIDSPDLPEIVRPAITTNVIEHKPEKGVNFCDRSCEEFGSMFQELTGMRNMVSS
LFDRLQKLSEENILLQNMMKLYENRTNEGMCWQDGRLFEKNEEWTVDSCTKCTCKESKIV
CHQITCPAVSCANPSFIEGECCPVCLPKDSEDGWSPWAEWTECTVTCGTGTQQRGRSCDV
TSNPCDGPSIQTRKCSLGKCDSRIRQDGGWSHWSPWSPCSVTCGEGIITRIRLCNSPVPQ
LGGKDCEGSGRETQRCEAEPCPIDGGWGPWSPWATCSATCGGGLRGRSRICNSPLPQYGG
KKCLGEDKDSDICNKKECPIDGCLSNPCFAGVECNSSPDGSWECGPCPQGFHGNGISCED
LNECDLVSDVCFKVNNVQRCVNTDPGFHCLPCPPRYKGTQPYGMGVEAAKKNKQVCEPEN
PCKEKTHNCHKFAECIYLGHFSDPMYKCECKIGYAGDGIICGEDSDLDGWPNQNLVCAAN
ATYHCKKDNCPSLPNSGQEDFDNDGQGDACDKDDDNDGIVDERDNCPLLYNPRQFDYDKD
DVGDRCDNCPYEHNPAQIDTDNNGEGDACAVDIDGDEILNEHDNCPYVYNTDQKDTDLDG
VGDQCDNCPLVHNPDQTDTDNDLVGDQCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKD
GKGDACDYDDDNDGVPDDRDNCRLVANPDQEDSDGDGRGDACKDDFDNDSIPDIFDVCPE
NDAISVTDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDF
SGTFYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSRAYGYSGVSLKVVNS
TTGSGEHLRNALWHTGNTPGQVHTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEG
KQIMADSGPIYDKTFAGGRLGLFVFSQELVFFSDLKYECRDMAEIPTVFIR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctggagtagactgctattgctgttaattcacatatgtttttgtggttttgta
caagcacaagatggtgacttagaagaagaatttgaatttgacctgtttgaaatcagtaat
atcaatcgcaagacactgggagccaaacttttccggggtccagaccttctttctcctgcc
tatcgcttcattcgatttgaccacatacctccagtagagcagaagactctcaatcagatt
ctcaagctgatccagaacaatgagggctttgtccttacggccactttgcggcaggacaag
ggctctcgaggcactcttatattcatggagggcccagacgccagtcagcggcagtttgag
atagtgtctaatggcagggcaaacaccttggacatggtatattgggtggaaggctctcaa
aatgtgatatcttttgaatatgtggacctttctgactcccactggaagaacataacgatt
caggtgcaaggagagaatgccaatttctatgttggctgcagcctcattgacagcatcata
ttggatgagcccttttatgagcatctaaagtcaggcattggcagccgaatgtatgtcgct
aaaggagcatatcgggaagatcactttaggggtttactgcagaatgtgcgctttattttt
gacacctcaatagatgacattcttcgcaacaaaggctgtgatgtaaatgcacctgcagaa
gtgaaaacagaaggcatagtaattgacagccctgacttaccggagattgtcagacctgcc
ataaccactaatgtcattgagcacaagcctgagaagggcgtgaatttctgtgatcgctcc
tgtgaggagtttggcagcatgtttcaagagctgacaggaatgaggaacatggtcagcagt
ttgtttgatcgattgcagaaattgtcagaagaaaatatactcttgcagaacatgatgaag
ttgtatgaaaatcggacaaatgaaggtatgtgctggcaagacggtcgactatttgaaaaa
aatgaagaatggactgtggacagctgtaccaagtgtacctgcaaggaatctaaaatcgtt
tgccatcaaatcacttgcccagctgtgtcatgtgctaatccatcctttattgaaggcgaa
tgctgcccagtttgcttacccaaggacagtgaagatggctggtcaccatgggcagaatgg
actgaatgcacagtgacctgtggtactggtacgcaacagagaggaaggtcatgtgatgta
acgagcaatccttgtgatggaccttccatccaaacaagaaaatgcagccttggaaaatgt
gacagccgcattcgacaggatggaggttggagtcactggtccccatggtctccgtgctct
gtcacctgtggtgaaggcatcattacacgcatacgtctgtgcaattctcctgttccacag
ctcggaggcaaggactgtgaaggcagcgggagagagacccagcgttgtgaagcggagccc
tgtcccattgatggaggctggggcccctggtcaccatgggctacctgttctgctacatgt
ggaggaggtctgaggggacggtccagaatctgcaacagccccctgccacagtatggaggc
aagaagtgtttgggagaggacaaagatagtgacatatgtaacaagaaagaatgtcctatt
gatgggtgcctctctaacccctgctttgctggagtagaatgtaacagttccccagatggc
tcatgggaatgcggaccctgtcctcagggattccacggcaatgggatttcctgtgaggat
ctcaacgagtgtgatttggtatctgatgtgtgctttaaagtgaataatgttcaaagatgt
gttaacactgatcccggatttcactgtttgccttgcccacctcgatacaaaggaacccag
ccatatggaatgggcgtggaggctgccaagaaaaacaagcaagtatgtgaacctgagaac
ccatgcaaagagaagacccacaactgccacaagtttgctgaatgtatttaccttggccac
ttcagcgatcccatgtataaatgtgaatgtaagattggctatgctggagatggaatcatt
tgtggagaggattcggacttagatggctggcctaaccagaacctcgtctgtgctgctaat
gctacataccactgcaagaaggacaactgtccaagcctgccaaactctggccaagaagac
tttgataatgatggccagggcgatgcttgcgacaaagatgacgacaacgatggtattgtg
gatgaaagggataactgtcccctgctatacaatccccgtcagtttgactatgacaaggat
gatgttggcgaccgttgtgacaactgtccctatgaacacaatcctgcccagattgatact
gacaacaatggggaaggagatgcctgtgctgtggatattgatggtgatgaaattctgaat
gaacacgataactgtccttatgtatacaatactgaccagaaggacacagatctagatgga
gtgggagatcagtgtgacaactgcccactggtgcacaatcctgaccagacagacacagac
aatgatcttgttggtgaccaatgcgacaataatcaagatattgatgaagatggacatcag
aacaatttggacaactgcccatatattccaaatgctaaccaagcagaccatgataaggat
ggcaaaggtgatgcctgtgattatgatgatgacaatgatggagttcctgacgatagagac
aactgtagacttgtggccaatcccgaccaagaagattctgatggcgatggacgaggtgat
gcatgcaaggacgactttgacaatgacagtattcctgacatctttgatgtttgccctgag
aatgatgctattagtgtgacagacttcaggaaatttcagatggtccaccttgatccaaaa
ggtaccactcagattgatccaaactgggtggtccgtcaccaaggcaaagagcttgttcag
actgcaaactctgatcctggcattgcggttggttttgacgaattcaacgctgtagacttt
agtggcaccttctatgtgaatacagatcgtgatgacgactatgcaggatttgtgtttggc
taccagtcaagtggtcgcttttatgtggttatgtggaagcagattacccagacctactgg
gaggataaaccctctcgagcatatggttattctggggtctcccttaaagtggtcaactca
accacaggctctggagaacacttgagaaatgccctttggcacacaggaaacaccccaggc
caggttcatactctatggcatgaccctaaaaatattggttggaaggactacacagcctac
aggtggcatctgatccacagacccaagactggatttattagagttgtagtttatgaagga
aaacagatcatggctgactctggtcccatctatgataaaacatttgccggtggaagatta
ggactgtttgtcttttctcaagagttggtctttttctcggatctcaagtatgagtgcaga
gatatggcagagatcccaactgtgttcataagataa
DBGET
integrated database retrieval system
