Polypterus senegalus (gray bichir): 120516260
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Entry
120516260 CDS
T08668
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120516260 (atxn1b)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
120516260
NCBI-ProteinID:
XP_039593718
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Position
16:complement(209194..389445)
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AA seq
844 aa
AA seq
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MKSNQERSNECLPPKKREIPPSNLPSDEKPVLVAPATESQRGENLAWLASVASGQDGTGS
ARQGGTGSSVEAGLPQDADLYKAPPTTGEFSSSSSSSSSSSARASRPGPTITTISTVYPS
ALSQSVQYAQLPHTFQFISPPNAGPYASYIPSQLISPSSTTAATSPSQRSQLEAYTAAVI
SQAQASKAEHHLHHQAHHVVRPPGLVAAGTPPPPPSQYVQIAGSPSAVSRAVSSPPAHIP
LHIHSHSAVIPQALALGGPSQVVVHYSDGHVATAPSKKHPEEGRTREVLNGEMEKGRHYG
LSQELTGGKPGAGAKGSALLHHHHHHHHHHHQQQQQQHRHFEARHVMLPAEYNAQENSGI
RTSLMLVPNSHSSSSTDLETTREHSPSLAAHEKAGLGQGKPSLRPSYALSSSQLSSDGLK
ATVATLSPHTVIQTTHNATEQLSMGLPATSFYPAASQQPIIGYITSSGTQPPQQAIGFHP
QHLVIPGNSPLIIPVGGGGSGEVEGGPTIVTSSQPFVPAAITKSEPFAVTEPLPSQPSAS
YHATVMQAQIHLPVVQPIANTSPAGTLPPAVPTPTLPPYFMKGSIIQLADGELKKVEDLK
TEDFIQSAEISNDLKIDSSTVERIEGSQNASFAIIQFAVGEHRAQVSVEVLVEYPFFVFG
QGWSSCCPERTTQLFDLPCTKLSVGDVCISLTLKNLKNGSLKKGQPVDPSSSILLKAPKN
DSLYGSRGRYTEQENGIGQRGAGGGAGGGGGGSVPASAMGTQTRAENGELKFQDKTPLPV
TCKPLVTKTDAAGGKPTARKRRWSAPESRKVEKSEEEPPLTLPKPTFIPQEVKLCIEGRS
NLGK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatcaggagcgaagcaatgagtgtctgccgccgaaaaagcgtgagataccc
ccgagcaacctgccatcagatgagaagccggtgttggtggcccccgctaccgagagccag
cggggggaaaatctcgcttggctcgccagcgtagccagtgggcaggacggcacgggcagt
gcaaggcaaggcgggacggggagctcggtcgaggccggactgccgcaagatgcagacttg
tacaaagcacctcccaccaccggggagttttcctcctcttcttcttcctcctcctcctcc
tctgccagagcttctagacccgggcccaccatcacgacaatctctaccgtgtacccatcg
gccttgtctcagtcggtgcagtacgctcagctaccacacaccttccagttcatcagccca
cccaacgccggaccctacgccagctacatcccctctcagctcatctctccctcctccacg
acggccgccacctccccgtcccagcgctctcagctggaggcctacacggccgccgtaatc
tctcaagcccaggcctccaaagccgagcatcaccttcatcaccaagcgcaccacgtcgtc
cggccgcctggactggttgcagctgggacgccgccgcccccccctagccagtacgtgcaa
atcgcgggctcaccttcggcggtcagcagggccgtctcgtcccctccagctcacatccct
ttgcacattcactctcactcggctgtcatccctcaggccctcgccctcggtgggccctct
caggtggttgtccattatagtgacggacacgtggcgacagccccctcgaaaaagcacccg
gaggaagggcggacgcgcgaggtgctcaacggcgagatggagaaggggagacactatggt
ctgtcccaggaacttactggcggcaagcccggagcgggagccaaaggcagcgccctctta
catcatcaccatcatcatcatcaccaccaccaccagcagcagcagcagcagcaccgccac
ttcgaggctcggcacgtgatgctcccagcggaatacaatgcacaggaaaactcaggcatt
cggacgtcactcatgcttgtgcccaacagccactcttccagcagcactgacttggagacc
accagggagcattcaccctctttggctgcccacgagaaagctggcttaggccaggggaag
ccgagcttgagaccatcctacgccctctcgtcctcccaactcagctcagatggattaaag
gcgacggtggcgacgctttctccgcacaccgtcatccagaccacccataatgccacagag
cagctctccatgggactacctgccacctccttttaccctgccgcctcccaacagccgatc
attggctacatcacgagcagcggcacacagccgccgcagcaggccatcggtttccaccca
cagcacttagtaatccctgggaactctccgctgatcatcccagtcggtggtggcggtagt
ggggaggtagaaggtgggccaactattgtgacctcatcgcaaccatttgtacccgctgca
atcacgaagagcgagccctttgccgtcaccgagcccctgcctagtcaaccttctgcctcg
taccacgctacagtgatgcaagcccagatccacctccctgtagtgcagcccatagctaac
acaagccccgcgggcactctgccccctgctgtgcccacgcccaccctgcccccttacttc
atgaagggctccatcatccagctggctgacggcgaactgaagaaagttgaggatctgaaa
acggaagacttcattcagagcgccgagatcagcaacgacctgaagatcgactccagcacc
gtggaacggatcgaaggcagccagaacgccagcttcgccatcatccagtttgccgtcgga
gagcacagagctcaggtcagtgtggaagtgttggtcgagtacccttttttcgtttttgga
caaggttggtcatcttgctgcccggagagaacgacccaactctttgaccttccctgcacc
aagctctcggtaggagacgtctgtatttccctcaccctgaaaaacctgaaaaacggctct
ttaaaaaagggccagcctgtggatcccagcagcagcatcctgctgaaagccccaaagaat
gacagcctctatggcagcagaggacggtacacggagcaggagaatgggattggccagcgc
ggagcgggaggcggagccggaggtggaggcggaggaagcgtcccggccagcgcgatgggc
acacagacacgcgcagaaaacggtgaactgaagtttcaagacaaaacaccgctgcccgtc
acgtgcaaaccactggtgacgaaaacagacgctgctggtggcaaaccaacagccaggaaa
cgcaggtggtctgccccggaaagtcgaaaggtggagaaatccgaagaggagcctcctttg
actcttcctaaacccacttttattcctcaggaggtaaagctttgcattgaaggccggtcg
aatctaggcaagtag
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