Polypterus senegalus (gray bichir): 120516295
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Entry
120516295 CDS
T08668
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04141
Protein processing in endoplasmic reticulum
psex04210
Apoptosis
psex04217
Necroptosis
psex04218
Cellular senescence
psex04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120516295 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120516295 (capn2l)
04217 Necroptosis
120516295 (capn2l)
04218 Cellular senescence
120516295 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120516295 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120516295 (capn2l)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
120516295 (capn2l)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C2: calpain family
120516295 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
EF-hand_7
DUF5580_M
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120516295
NCBI-ProteinID:
XP_039593803
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All DBs
Position
16:22317013..22370995
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AA seq
699 aa
AA seq
DB search
MSGIASKIQHQRARAAGVGNNYNAVKYLGQDFEALRQQCLQSGKLFCDDTFPAHPTALGF
RELAPNSSKTRGVTWKRPTELTSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEEI
LARVVPHGQSFQEKYAGIFHFQFWQFGEWVEVVIDDRLPVKDGELVFVHSAQGNEFWSAL
LEKAYAKLNGCYEALSGGTTTEGFEDFTGGIAEVYELRRPHPQLFKIISKALQTGSLLGC
SIDITSSAETEAVTSQKLVKGHAYSLTGAEEVDYRGRPEKLIRIRNPWGQVEWTGPWSDN
SREWSQISAGEKSRLSNRSEDGEFWMSFNDFLRHYSRVEICNLTPDALTSNRYKKWDLSR
FEGNWRRGSTAGGCRNYPTTFWTNPQYVIKLDEADDDPDDNEVGCSFLVGLIQKNRRSQR
KMGEDMHTIGFAIYEIPKECIGQKAVHLNKDYFLRNQSKARSETFINLREVCSRFKLPPG
EYLVVPSTFEPNKDADFCLRVFAEKHAEAIEMDDKIDAKLDETEITEADIDAKFRGLFNQ
LAGEDSEISAFELRTILNKVVSKRTDVKTDGFSLDTCRNMVNLLDDGSAKLGLLEFKILW
TKIDRYLNIFRKLDVDRSGTMSSHEMRVAIEEAGFSLNNALLQSIVARYSDQDLTIDFDN
FVGCLIRLESMFRIFKSLSKDENGEVQFSLIQWLNVTLL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtatcgcctccaagatccagcaccagcgggctcgcgcagccggggtgggcaac
aactataatgcggtcaagtacctgggccaggacttcgaggcgctccggcagcagtgcctg
cagtcaggcaagctcttctgcgacgacaccttccctgcacatccgaccgcgctgggcttc
agggagctggcgccgaactcgtctaaaacgcggggtgtcacctggaaacgacccacggag
ctcacgtccaatcctcagtttattgttggaggggccaccaggacagatatttgccaagga
gctctcggtgactgttggctcttagctgccattgcatctttgacgttaaatgaagaaatt
ttggcacgagttgtcccacatggacaaagtttccaggagaaatatgctggaatctttcat
ttccagttctggcaatttggagaatgggttgaggtagttattgatgacagactacctgtg
aaggatggagagctggtgttcgtccactcagcccaaggaaatgagttctggagtgccctg
ttggagaaggcgtatgctaagttgaatggctgctatgaagctctgtctggtggaactacc
acagaaggatttgaagattttactggaggaattgcagaagtttatgaattgcgtcggcca
catccccagctatttaaaataattagtaaagctctgcaaacaggatcacttcttggttgc
tctatagatatcacaagttcagctgaaacagaggcagtaacttcccagaaactggtgaaa
ggacatgcatactcattgactggagcagaggaggtagattatagaggacgccctgagaaa
ctgatcagaatccgcaatccctggggtcaggtggaatggaccggaccctggagtgataac
tcacgagaatggagccagatcagtgctggagaaaagtccagactgagcaacaggtcagaa
gatggagaattctggatgtcctttaacgattttctacgacattattcacgtgtggagatc
tgtaatctaacacccgatgctctaacaagcaacagatacaagaagtgggatttgtccaga
tttgaggggaattggagaaggggatcaactgctggtggctgcagaaactatccaaccaca
ttttggacaaacccccaatatgttatcaaattggatgaggcagatgatgacccagatgac
aatgaggtgggctgcagcttcctagttggcttaattcagaagaaccgcaggagccaaaga
aaaatgggtgaagatatgcacacaattggctttgctatctatgagattcccaaagagtgc
attggacagaaggctgtccacctgaacaaggactactttttaaggaatcaatcaaaagca
aggtcagagaccttcattaatctacgggaagtatgcagccgcttcaaactgccacctgga
gaatatctcgttgtcccctccacgtttgagcccaacaaagatgctgatttctgcctcaga
gtctttgcagaaaagcatgcagaagcaattgaaatggatgacaagattgatgctaaactt
gatgagacagaaatcacagaagcagatatcgatgccaaattcagaggtctctttaatcag
ttagcaggagaggacagtgagatatctgcttttgaattacgaacaatactgaacaaagtg
gtttccaaacgcactgatgttaaaacggatggatttagcctggacacctgtcgcaatatg
gttaacctgctggacgacgggagtgcaaagctgggcttattggaattcaaaattttgtgg
acgaaaattgatcgatacctgaatattttccgtaagctagatgttgacagatctggtaca
atgagctctcatgagatgcgtgtggccattgaagaagcaggtttttctctcaacaatgca
ttacttcagagtatcgttgcccgttactcagatcaggatcttaccattgattttgacaac
tttgttgggtgtctgattcgtttggaatccatgtttagaatctttaaatctctgagcaaa
gatgaaaatggagaggtgcagttttcactcattcagtggctgaatgttactttgctgtaa
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